Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_D03
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0462 + 9583558-9584910                                           86   3e-17
11_06_0416 + 23307984-23308281,23310083-23310900                       31   0.93 
11_01_0435 + 3337840-3338494,3338950-3339313,3339733-3340009           31   1.6  
08_01_0901 - 8873905-8874076,8874674-8874786,8875388-8875522,887...    30   2.8  
11_02_0061 + 7904260-7904824,7904935-7905470,7906184-7906861           29   6.5  

>09_02_0462 + 9583558-9584910
          Length = 450

 Score = 86.2 bits (204), Expect = 3e-17
 Identities = 38/55 (69%), Positives = 45/55 (81%)
 Frame = +3

Query: 588 NVSDAFYRYKMPRICAKVEGKGNGIKTVIVNMPEVAKALGRPATYPTKYFGL*IG 752
           N  DAFYRYKMPR+  K+EG+GNGIKT IVNM ++AKAL RPA+Y TKYFG  +G
Sbjct: 10  NRDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELG 64



 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +1

Query: 739 GCELGAXTQFDFKNDRFIVNGSHDSSKLQDLLDGLSVNSXWALS-GKPET 885
           GCELGA ++FD K    +VNG+HD++KL  LL+            G PET
Sbjct: 60  GCELGAQSKFDEKTGISLVNGAHDTAKLAGLLENFIKKYVQCYGCGNPET 109


>11_06_0416 + 23307984-23308281,23310083-23310900
          Length = 371

 Score = 31.5 bits (68), Expect = 0.93
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = -1

Query: 692 DFRHVDD----DRLDAVPLPFDLGAYPRHLVPVERIGDVTVHVYGTHF 561
           D R  DD     +L  VPLP D+GA+   L+      DV +HV G  F
Sbjct: 165 DIRTEDDATTVKKLVGVPLPSDIGAHLGRLLAAGHGADVAIHVGGETF 212


>11_01_0435 + 3337840-3338494,3338950-3339313,3339733-3340009
          Length = 431

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 20/61 (32%), Positives = 32/61 (52%)
 Frame = -1

Query: 482 TGSSRSVRVRCSAGPGPAAVASHVCRSGSNFRCLLLQNFDVLRTVYLVVLSVMHPRRLAA 303
           T ++ +     SA   P+A++S +   G +FR + ++    L   YL   SV+ PR LAA
Sbjct: 135 TATTTTTTTSSSATSPPSALSSPLSSIGGSFRAMQIRK---LSGCYLHCHSVLDPRTLAA 191

Query: 302 V 300
           V
Sbjct: 192 V 192


>08_01_0901 -
           8873905-8874076,8874674-8874786,8875388-8875522,
           8875661-8875792,8876136-8876301,8877154-8877248,
           8878983-8879104,8879283-8879403,8879556-8879633,
           8879730-8879991,8880196-8880366,8881070-8881710
          Length = 735

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = -2

Query: 751 PIHNPKYFV-GYVAGLPSALATSGMLTMTVLMPFPFPSTLAHIRGILYR*NASETLRFTF 575
           P+ +P + V G   G+   L ++G++   +  P P PST+A+++ +          RF F
Sbjct: 25  PLTSPAFAVFGANTGVGKTLVSAGLVASLLASPSPSPSTVAYLKPLQTGFPDDSDARFVF 84


>11_02_0061 + 7904260-7904824,7904935-7905470,7906184-7906861
          Length = 592

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 216 LPVLYDFSKIFRNISSVRGE*SVCCHRRN 302
           + V+ DF+ IFR +  + G   V CH RN
Sbjct: 149 IAVMRDFTDIFRKLLGIPGSAHVGCHGRN 177


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,087,741
Number of Sequences: 37544
Number of extensions: 558499
Number of successful extensions: 1474
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)