Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_D03
         (887 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    31   0.062
AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprote...    30   0.082
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    27   1.0  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   4.1  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   4.1  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    24   5.4  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    24   7.1  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   9.4  

>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 30.7 bits (66), Expect = 0.062
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = +2

Query: 698 GAGETRHVPNKVLWVVNWVPXLSLTSRMTVSLSTEAMTHLNFKIYW 835
           G  +T HVP++ +W+ + V   +      V++ T+A+ H   K+ W
Sbjct: 93  GGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVW 138


>AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprotein
           protein.
          Length = 470

 Score = 30.3 bits (65), Expect = 0.082
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 596 GDVTVHVYGTHFGRVVGFCLLP 531
           G +TVH +G +FG  V F L P
Sbjct: 178 GSITVHAFGAYFGLAVSFMLRP 199


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 26.6 bits (56), Expect = 1.0
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +2

Query: 716 HVPNKVLWVVNWVPXLSLTSRMTVSLSTEAMTHLNFKIYWT 838
           +VP++ +W+ + V   +      V+  T+A+ H   K+ WT
Sbjct: 111 YVPSEHIWLPDIVLYNNADGEYVVTTLTKAILHYTGKVIWT 151


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = +2

Query: 698 GAGETRHVPNKVLWVVNWVPXLSLTSRMTVSLSTEAMTHLNFKIYW 835
           G  E  HVP+  +W  + V   +      V+L+T+A  +   ++ W
Sbjct: 93  GGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 138


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +1

Query: 148 RCSFSRSQDQQFIKSQSSRPSGRYRFYMTLARYSETSVLCAESSRC 285
           R    R Q    IK  S+ P+ RY+  + LA      +L  E +RC
Sbjct: 825 RRMLQRVQKHCAIKVSSAFPTVRYQTAVVLASMIPICLLVQEDARC 870


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 11/46 (23%), Positives = 23/46 (50%)
 Frame = +2

Query: 698 GAGETRHVPNKVLWVVNWVPXLSLTSRMTVSLSTEAMTHLNFKIYW 835
           G  E  +VP++ +W+ + V   +      V+L T+A      +++W
Sbjct: 99  GGVEMLYVPSEQIWLPDIVLYNNWDGNYEVTLMTKATLKYTGEVFW 144


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +2

Query: 698 GAGETRHVPNKVLWVVNWVPXLSLTSRMTVSLSTEAMTHLNFKIYW 835
           G  +  HVP+  +W  + V   +      V+L T+A  + N  + W
Sbjct: 97  GGVQMLHVPSDHIWRPDIVLYNNADGHYEVTLMTKATVYNNGMVIW 142


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 582 SRLRNPFWTGCWVLFAS 532
           SR+  PF  G W+L AS
Sbjct: 242 SRVETPFVIGVWILSAS 258


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 945,753
Number of Sequences: 2352
Number of extensions: 20708
Number of successful extensions: 46
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)