Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_D01
(900 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P63220 Cluster: 40S ribosomal protein S21; n=8; Bilater... 128 3e-28
UniRef50_Q9CQR2 Cluster: 40S ribosomal protein S21; n=10; Euther... 126 8e-28
UniRef50_Q16H14 Cluster: Putative uncharacterized protein; n=1; ... 123 7e-27
UniRef50_Q7ZUG5 Cluster: 40S ribosomal protein S21; n=42; Coelom... 121 3e-26
UniRef50_P49197 Cluster: 40S ribosomal protein S21; n=8; Metazoa... 112 1e-23
UniRef50_A6SK20 Cluster: 40S ribosomal protein S21; n=28; Fungi/... 103 8e-21
UniRef50_P05764 Cluster: 40S ribosomal protein S21; n=17; Dikary... 96 1e-18
UniRef50_Q9SMI2 Cluster: 40S ribosomal protein S21; n=7; Eukaryo... 89 2e-16
UniRef50_P0C0V8 Cluster: 40S ribosomal protein S21-A; n=11; Euka... 84 5e-15
UniRef50_Q3E902 Cluster: 40S ribosomal protein S21-2; n=4; Arabi... 77 8e-13
UniRef50_Q2HVJ1 Cluster: Ribosomal protein S21e; n=1; Medicago t... 75 3e-12
UniRef50_Q9BYK2 Cluster: Ribosomal protein S21; n=6; Coelomata|R... 73 8e-12
UniRef50_P35687 Cluster: 40S ribosomal protein S21; n=14; Eukary... 73 1e-11
UniRef50_Q41852 Cluster: 40S ribosomal protein S21; n=8; Eukaryo... 71 3e-11
UniRef50_Q7R2D7 Cluster: GLP_623_72066_72335; n=1; Giardia lambl... 71 5e-11
UniRef50_UPI0000DA1AA9 Cluster: PREDICTED: similar to 40S riboso... 69 1e-10
UniRef50_Q13666 Cluster: 8.2 kDa differentiation factor; n=2; Ho... 69 2e-10
UniRef50_Q4E3L9 Cluster: 40S ribosomal protein S21, putative; n=... 68 3e-10
UniRef50_Q4RDV7 Cluster: Chromosome undetermined SCAF15610, whol... 59 2e-07
UniRef50_UPI0000499913 Cluster: 40S ribosomal protein S21; n=1; ... 57 5e-07
UniRef50_Q98SD3 Cluster: 40S ribosomal protein S21; n=1; Guillar... 53 1e-05
UniRef50_A0BWW0 Cluster: Chromosome undetermined scaffold_133, w... 53 1e-05
UniRef50_UPI0000E23711 Cluster: PREDICTED: similar to 8.2 kDa di... 51 3e-05
UniRef50_Q00U69 Cluster: Ribosomal protein S21-maize; n=1; Ostre... 50 1e-04
UniRef50_Q9DEH3 Cluster: Diaphanous homologue; n=13; Eumetazoa|R... 35 2.5
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 34 5.7
UniRef50_Q4SZ72 Cluster: Chromosome undetermined SCAF11805, whol... 33 7.5
UniRef50_Q98DZ0 Cluster: GTP-binding protein in thiophene and fu... 33 7.5
>UniRef50_P63220 Cluster: 40S ribosomal protein S21; n=8;
Bilateria|Rep: 40S ribosomal protein S21 - Homo sapiens
(Human)
Length = 83
Score = 128 bits (308), Expect = 3e-28
Identities = 58/83 (69%), Positives = 68/83 (81%)
Frame = +1
Query: 100 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 279
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 280 RMGESDDCIVRLTKKDGILAKNY 348
RMGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>UniRef50_Q9CQR2 Cluster: 40S ribosomal protein S21; n=10;
Eutheria|Rep: 40S ribosomal protein S21 - Mus musculus
(Mouse)
Length = 83
Score = 126 bits (304), Expect = 8e-28
Identities = 58/83 (69%), Positives = 68/83 (81%)
Frame = +1
Query: 100 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 279
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIAAKDHASIQMNVAEVDRTTGRFNGQFKTYGICGAIR 60
Query: 280 RMGESDDCIVRLTKKDGILAKNY 348
RMGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>UniRef50_Q16H14 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 95
Score = 123 bits (296), Expect = 7e-27
Identities = 56/87 (64%), Positives = 69/87 (79%)
Frame = +1
Query: 85 GRTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVV 264
GR+ K NDAG FVDLYCPRKCS+S R+IHAKDHA +Q+ I DV+P TGR +TS +Y +
Sbjct: 10 GRSSK--NDAGGFVDLYCPRKCSSSKRIIHAKDHALIQINIVDVNPVTGRMLETSTVYAI 67
Query: 265 CGAIRRMGESDDCIVRLTKKDGILAKN 345
C IRR+GESDDCIVRL KK+ ++KN
Sbjct: 68 CDVIRRLGESDDCIVRLAKKNLKISKN 94
>UniRef50_Q7ZUG5 Cluster: 40S ribosomal protein S21; n=42;
Coelomata|Rep: 40S ribosomal protein S21 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 81
Score = 121 bits (291), Expect = 3e-26
Identities = 56/81 (69%), Positives = 65/81 (80%)
Frame = +1
Query: 100 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 279
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ IA+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQINIAEVDRVTGRFNGQFKTYAICGAIR 60
Query: 280 RMGESDDCIVRLTKKDGILAK 342
RMGE+DD ++RL K D I+AK
Sbjct: 61 RMGEADDSLLRLAKTDSIVAK 81
>UniRef50_P49197 Cluster: 40S ribosomal protein S21; n=8;
Metazoa|Rep: 40S ribosomal protein S21 - Caenorhabditis
elegans
Length = 88
Score = 112 bits (269), Expect = 1e-23
Identities = 52/83 (62%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
Frame = +1
Query: 100 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR-AADTSKMYVVCGAI 276
MQNDAG+ V+LY PRKCS+SNR+I KDHASVQ+ DVDP TGR S Y +CGAI
Sbjct: 1 MQNDAGQTVELYVPRKCSSSNRIIGPKDHASVQIDFVDVDPETGRMIPGKSTRYAICGAI 60
Query: 277 RRMGESDDCIVRLTKKDGILAKN 345
RRMGESDD I+RL +KDG++ ++
Sbjct: 61 RRMGESDDAILRLAQKDGLVPRD 83
>UniRef50_A6SK20 Cluster: 40S ribosomal protein S21; n=28;
Fungi/Metazoa group|Rep: 40S ribosomal protein S21 -
Botryotinia fuckeliana B05.10
Length = 88
Score = 103 bits (246), Expect = 8e-21
Identities = 48/79 (60%), Positives = 60/79 (75%)
Frame = +1
Query: 100 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 279
M+ND GE VDLY PRKCSA+NR+I AKDH SVQ+ IA VD GRA +++Y +CG IR
Sbjct: 1 MENDKGELVDLYVPRKCSATNRIIKAKDHGSVQISIAKVD-ENGRATGENQVYALCGFIR 59
Query: 280 RMGESDDCIVRLTKKDGIL 336
MGESDD + RL ++DG+L
Sbjct: 60 AMGESDDSLNRLAQRDGLL 78
>UniRef50_P05764 Cluster: 40S ribosomal protein S21; n=17;
Dikarya|Rep: 40S ribosomal protein S21 -
Schizosaccharomyces pombe (Fission yeast)
Length = 87
Score = 95.9 bits (228), Expect = 1e-18
Identities = 47/80 (58%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = +1
Query: 100 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSK-MYVVCGAI 276
M+N+AG+ VDLY PRKCSA+NR+I AKDHASVQ+ + VD A GR K Y + G +
Sbjct: 1 MENEAGQLVDLYVPRKCSATNRIIQAKDHASVQINVCAVD-AEGRQIPGEKTTYAISGFV 59
Query: 277 RRMGESDDCIVRLTKKDGIL 336
R GESDDCI RLT +DG+L
Sbjct: 60 RSKGESDDCINRLTTQDGLL 79
>UniRef50_Q9SMI2 Cluster: 40S ribosomal protein S21; n=7;
Eukaryota|Rep: 40S ribosomal protein S21 - Cyanophora
paradoxa
Length = 82
Score = 88.6 bits (210), Expect = 2e-16
Identities = 41/78 (52%), Positives = 52/78 (66%)
Frame = +1
Query: 100 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 279
MQND G+ VDLY PRKCSA+NRLI A DHA+VQ+ + VDP +G + +CG +R
Sbjct: 1 MQNDEGKIVDLYIPRKCSATNRLISATDHAAVQINVGHVDPNSGLYTGDYTTFALCGFVR 60
Query: 280 RMGESDDCIVRLTKKDGI 333
MGESD + RL K G+
Sbjct: 61 SMGESDAALNRLCVKHGL 78
>UniRef50_P0C0V8 Cluster: 40S ribosomal protein S21-A; n=11;
Eukaryota|Rep: 40S ribosomal protein S21-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 87
Score = 83.8 bits (198), Expect = 5e-15
Identities = 42/80 (52%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = +1
Query: 100 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKM-YVVCGAI 276
M+ND G+ V+LY PRKCSA+NR+I A DHASVQ+ +A VD GRA + Y + G +
Sbjct: 1 MENDKGQLVELYVPRKCSATNRIIKADDHASVQINVAKVD-EEGRAIPGEYVTYALSGYV 59
Query: 277 RRMGESDDCIVRLTKKDGIL 336
R GESDD + RL + DG+L
Sbjct: 60 RSRGESDDSLNRLAQNDGLL 79
>UniRef50_Q3E902 Cluster: 40S ribosomal protein S21-2; n=4;
Arabidopsis thaliana|Rep: 40S ribosomal protein S21-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 85
Score = 76.6 bits (180), Expect = 8e-13
Identities = 38/81 (46%), Positives = 52/81 (64%)
Frame = +1
Query: 100 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 279
MQN+ G+ +LY PRKCSA+NRLI +KDHASVQL I +D A G + +CG +R
Sbjct: 1 MQNEEGQVTELYIPRKCSATNRLITSKDHASVQLNIGHLD-ANGLYTGQFTTFALCGFVR 59
Query: 280 RMGESDDCIVRLTKKDGILAK 342
G++D + RL +K + AK
Sbjct: 60 AQGDADSGVDRLWQKKKVEAK 80
>UniRef50_Q2HVJ1 Cluster: Ribosomal protein S21e; n=1; Medicago
truncatula|Rep: Ribosomal protein S21e - Medicago
truncatula (Barrel medic)
Length = 106
Score = 74.5 bits (175), Expect = 3e-12
Identities = 37/78 (47%), Positives = 50/78 (64%)
Frame = +1
Query: 91 TYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCG 270
T KMQN+ G+ +LY PRKCSA+NRLI AKDHASVQ+ + +D +G + +CG
Sbjct: 23 TLKMQNEEGQITELYIPRKCSATNRLITAKDHASVQINVGHLD-ESGVYNGQFSTFALCG 81
Query: 271 AIRRMGESDDCIVRLTKK 324
R G++D I RL +K
Sbjct: 82 FTRAQGDADSGIDRLWQK 99
>UniRef50_Q9BYK2 Cluster: Ribosomal protein S21; n=6; Coelomata|Rep:
Ribosomal protein S21 - Homo sapiens (Human)
Length = 66
Score = 73.3 bits (172), Expect = 8e-12
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +1
Query: 100 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 234
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V GR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45
>UniRef50_P35687 Cluster: 40S ribosomal protein S21; n=14;
Eukaryota|Rep: 40S ribosomal protein S21 - Oryza sativa
subsp. japonica (Rice)
Length = 82
Score = 72.9 bits (171), Expect = 1e-11
Identities = 37/75 (49%), Positives = 48/75 (64%)
Frame = +1
Query: 100 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 279
MQN+ G+ VDLY PRKCSA+NR+I AKDHASVQ+ I VD G + + G IR
Sbjct: 1 MQNEEGQMVDLYVPRKCSATNRIITAKDHASVQINIGHVD-ENGLYDGRFTTFALSGFIR 59
Query: 280 RMGESDDCIVRLTKK 324
G++D + RL +K
Sbjct: 60 AQGDADSALDRLWQK 74
>UniRef50_Q41852 Cluster: 40S ribosomal protein S21; n=8;
Eukaryota|Rep: 40S ribosomal protein S21 - Zea mays
(Maize)
Length = 81
Score = 71.3 bits (167), Expect = 3e-11
Identities = 36/75 (48%), Positives = 49/75 (65%)
Frame = +1
Query: 100 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 279
MQN+ G+ VDLY PRKCSA+NR+I AKDHASVQ+ I +D A G + + G +R
Sbjct: 1 MQNEEGKTVDLYVPRKCSATNRIITAKDHASVQINIGHLD-ANGLYDGHFTTFALSGFVR 59
Query: 280 RMGESDDCIVRLTKK 324
G++D + RL +K
Sbjct: 60 AQGDADSSLDRLWQK 74
>UniRef50_Q7R2D7 Cluster: GLP_623_72066_72335; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_623_72066_72335 - Giardia lamblia
ATCC 50803
Length = 89
Score = 70.5 bits (165), Expect = 5e-11
Identities = 34/81 (41%), Positives = 48/81 (59%)
Frame = +1
Query: 100 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 279
M+N +G VD Y PRKCSA+NRLI KDHA+VQL +A V+ + + CGAIR
Sbjct: 8 MKNSSGVVVDAYIPRKCSATNRLIGPKDHAAVQLSVARVNDKGKMIENNYVTFAFCGAIR 67
Query: 280 RMGESDDCIVRLTKKDGILAK 342
G D + L ++ G++ +
Sbjct: 68 SRGGVDSAFMLLAQEHGLMER 88
>UniRef50_UPI0000DA1AA9 Cluster: PREDICTED: similar to 40S ribosomal
protein S21; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S21 - Rattus norvegicus
Length = 326
Score = 69.3 bits (162), Expect = 1e-10
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +1
Query: 100 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATG 231
+QNDAGEFVDLY PRKCS+SN +I KDH S+QL +A VD +TG
Sbjct: 261 VQNDAGEFVDLYVPRKCSSSNHIITVKDHTSIQLNVAKVDRSTG 304
>UniRef50_Q13666 Cluster: 8.2 kDa differentiation factor; n=2; Homo
sapiens|Rep: 8.2 kDa differentiation factor - Homo
sapiens (Human)
Length = 97
Score = 68.9 bits (161), Expect = 2e-10
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +1
Query: 100 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIA 210
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVA 37
>UniRef50_Q4E3L9 Cluster: 40S ribosomal protein S21, putative; n=4;
Trypanosoma cruzi|Rep: 40S ribosomal protein S21,
putative - Trypanosoma cruzi
Length = 251
Score = 68.1 bits (159), Expect = 3e-10
Identities = 35/77 (45%), Positives = 47/77 (61%)
Frame = +1
Query: 106 NDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRM 285
N+ G VDLY PRKC A+N LI + DH++VQ+ IA+VD A G T+ + + G +RR
Sbjct: 8 NEEGVNVDLYIPRKCHATNNLITSYDHSAVQIAIANVD-ANGVLNGTTTTFCIAGYLRRQ 66
Query: 286 GESDDCIVRLTKKDGIL 336
ESD I L GI+
Sbjct: 67 AESDHAINHLAISKGII 83
>UniRef50_Q4RDV7 Cluster: Chromosome undetermined SCAF15610, whole
genome shotgun sequence; n=2; Deuterostomia|Rep:
Chromosome undetermined SCAF15610, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 51
Score = 58.8 bits (136), Expect = 2e-07
Identities = 27/48 (56%), Positives = 32/48 (66%)
Frame = +1
Query: 199 LVIADVDPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTKKDGILAK 342
L + VD TGR K Y +CGAIRRMGESDD I+RL K D ++AK
Sbjct: 4 LHLPQVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAKNDSVIAK 51
>UniRef50_UPI0000499913 Cluster: 40S ribosomal protein S21; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S21 - Entamoeba histolytica HM-1:IMSS
Length = 86
Score = 57.2 bits (132), Expect = 5e-07
Identities = 29/71 (40%), Positives = 44/71 (61%)
Frame = +1
Query: 124 VDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGESDDC 303
++LY PR CS ++ LI A DHA+VQ+++ V+ G S +Y V G++R+ G SD
Sbjct: 7 IELYIPRHCSVTHTLIAADDHAAVQILVPHVN-ENGVILPESTVYTVKGSVRKDGISDHS 65
Query: 304 IVRLTKKDGIL 336
+ R +KDG L
Sbjct: 66 LNRQFQKDGFL 76
>UniRef50_Q98SD3 Cluster: 40S ribosomal protein S21; n=1; Guillardia
theta|Rep: 40S ribosomal protein S21 - Guillardia theta
(Cryptomonas phi)
Length = 82
Score = 52.8 bits (121), Expect = 1e-05
Identities = 29/75 (38%), Positives = 42/75 (56%)
Frame = +1
Query: 100 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 279
M + + V Y PRKCS SN+LI+ KDHAS+Q+ I +D ++ G +R
Sbjct: 1 MNSTNKKIVGEYIPRKCSLSNKLINNKDHASIQISIGVLD-KNDLFKGEYDIFAFSGLMR 59
Query: 280 RMGESDDCIVRLTKK 324
+ G+SD IV L +K
Sbjct: 60 KKGKSDYAIVNLIEK 74
>UniRef50_A0BWW0 Cluster: Chromosome undetermined scaffold_133,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_133,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 147
Score = 52.8 bits (121), Expect = 1e-05
Identities = 27/93 (29%), Positives = 52/93 (55%)
Frame = +1
Query: 100 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 279
M ND + VD+Y PRKC +N ++++ D++SVQ+ + VD G + ++ G +R
Sbjct: 1 MINDEKQVVDIYVPRKCQYTNMILNSSDYSSVQINVGQVD-ENGVYNKKNNTVILAGYLR 59
Query: 280 RMGESDDCIVRLTKKDGILAKNY*HLVRQTTIL 378
+ G+S + + ++ G+ + HL +T I+
Sbjct: 60 QKGQSAAALEAILRQRGV----FYHLHNETNII 88
>UniRef50_UPI0000E23711 Cluster: PREDICTED: similar to 8.2 kDa
differentiation factor, partial; n=1; Pan
troglodytes|Rep: PREDICTED: similar to 8.2 kDa
differentiation factor, partial - Pan troglodytes
Length = 60
Score = 51.2 bits (117), Expect = 3e-05
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +1
Query: 106 NDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIA 210
N+A EFVDLY PRKCS S+ +I AKDH S+Q+ +A
Sbjct: 1 NNASEFVDLYIPRKCSTSHHVIGAKDHTSMQMNMA 35
>UniRef50_Q00U69 Cluster: Ribosomal protein S21-maize; n=1;
Ostreococcus tauri|Rep: Ribosomal protein S21-maize -
Ostreococcus tauri
Length = 101
Score = 49.6 bits (113), Expect = 1e-04
Identities = 29/60 (48%), Positives = 35/60 (58%)
Frame = +1
Query: 100 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 279
M N GE VDLY PRKCS +NRLI A D ASVQL + +D A G + + G +R
Sbjct: 29 MINADGENVDLYIPRKCSWTNRLITATDKASVQLNVGHLD-ANGVYSGQYTTLALAGYVR 87
>UniRef50_Q9DEH3 Cluster: Diaphanous homologue; n=13; Eumetazoa|Rep:
Diaphanous homologue - Gallus gallus (Chicken)
Length = 1253
Score = 35.1 bits (77), Expect = 2.5
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +2
Query: 707 PPPREKGVXXWPPSVSXXPXPXPPXLRXGGXGXTPPQXG 823
PPP G PP + P PP L GG G PP G
Sbjct: 716 PPPLPGGTIPPPPPLFGGAVPPPPPLPGGGAGPPPPPPG 754
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 33.9 bits (74), Expect = 5.7
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +1
Query: 496 DPDMIRYXDEFGQXXTXM 549
DPDMIRY DEFGQ T M
Sbjct: 346 DPDMIRYIDEFGQTTTRM 363
>UniRef50_Q4SZ72 Cluster: Chromosome undetermined SCAF11805, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF11805,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 712
Score = 33.5 bits (73), Expect = 7.5
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -3
Query: 838 GKPXFPPL-GXGXXPSPXPKXRGXGVRXXGNGRGPXXNPLFPGG 710
G+P P L G P P + GV G G GP P FPGG
Sbjct: 512 GEPGIPGLPGQPGPPGPKGENSCEGVIDAGQGTGPKGQPGFPGG 555
>UniRef50_Q98DZ0 Cluster: GTP-binding protein in thiophene and furan
oxidation; n=13; Rhizobiales|Rep: GTP-binding protein in
thiophene and furan oxidation - Rhizobium loti
(Mesorhizobium loti)
Length = 443
Score = 33.5 bits (73), Expect = 7.5
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +1
Query: 52 LSHLVNSXVPCGRTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATG 231
L+ LVN+ R + ++N G +LY S RLIHA+ ++ AD D G
Sbjct: 129 LADLVNAETEAQRRFAVRNAEGVQSELYL----SWRRRLIHARAMIEAEIDFADEDDVPG 184
Query: 232 RAADT--SKMYVVCGAIRR 282
+DT S + + G I R
Sbjct: 185 SVSDTVWSDVRAMIGEIDR 203
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,420,008
Number of Sequences: 1657284
Number of extensions: 12369109
Number of successful extensions: 29301
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 25536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28866
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81571813589
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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