Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_C24
         (892 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   3.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   3.1  
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    24   5.4  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   9.4  

>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +2

Query: 263 QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLH 364
           +L+ E L  G   CN +  K CGK   HIR   H
Sbjct: 487 RLTFERLSGG---CNLHRCKLCGKVVTHIRNHYH 517


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 223 VVNVRSLLTQNRRYGSWDQVH 161
           V N R+LL   R  GSW +VH
Sbjct: 40  VRNNRALLIYERMGGSWSEVH 60


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -2

Query: 660 RHWGGGLL 637
           RHWGGGLL
Sbjct: 241 RHWGGGLL 248


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
 Frame = -3

Query: 461  YPEACQTHHASQFGA-YQLQRT 399
            YP A +T+H  QF   Y  QRT
Sbjct: 1297 YPFASETYHYHQFNLYYDAQRT 1318


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 835,565
Number of Sequences: 2352
Number of extensions: 17471
Number of successful extensions: 45
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)