Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_C21
         (900 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0285 - 2084560-2085246                                           30   2.2  
01_07_0315 - 42692539-42693260,42693357-42693609                       30   2.2  
08_02_1117 + 24407037-24407057,24407229-24407483,24407811-24408053     29   3.8  
07_01_0375 - 2790287-2790675,2790843-2793783                           28   8.8  
04_04_0936 + 29512562-29512576,29513009-29513336,29514117-295142...    28   8.8  
01_03_0231 + 14014243-14014390,14015053-14015141,14017859-140179...    28   8.8  

>07_01_0285 - 2084560-2085246
          Length = 228

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 547 GRGRRTDPGGHTAPAVPPGEAGD 615
           GRGR + PGG T+ + PPG   D
Sbjct: 12  GRGRESQPGGATSSSSPPGSNFD 34


>01_07_0315 - 42692539-42693260,42693357-42693609
          Length = 324

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +2

Query: 464 KLDKRVQDQCVSQMPGTPFMLLCKLYP 544
           K DKR  +QC+   PG     +C  YP
Sbjct: 64  KCDKRCPNQCIVMCPGCKTFCMCDFYP 90


>08_02_1117 + 24407037-24407057,24407229-24407483,24407811-24408053
          Length = 172

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 463 EIGQESTRPMRLPNARYSLHVTLQVVSRGRGRR 561
           E+G+ ST   + P  R  +     V +RGRGRR
Sbjct: 91  EVGRNSTEGTKTPTIRRGMAACATVEARGRGRR 123


>07_01_0375 - 2790287-2790675,2790843-2793783
          Length = 1109

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
 Frame = -3

Query: 364 TRSSPLEVELQFSIQCAYFNWKRFSSFLPPE-GRHYS---------YIISRLQEESRNTT 215
           T S P+E+ L  ++     N  RFS  +PPE G+  S         Y + ++     N T
Sbjct: 472 TGSLPVELSLLRNLSSLDMNRNRFSGPIPPEIGKFRSIERLILSENYFVGQIPPGIGNLT 531

Query: 214 EVMNFQLAFN*LHGNVSR 161
           +++ F ++ N L G + R
Sbjct: 532 KLVAFNISSNQLTGPIPR 549


>04_04_0936 +
           29512562-29512576,29513009-29513336,29514117-29514245,
           29514451-29514965
          Length = 328

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +2

Query: 245 RNDIRIMPPFRRKKAAKSFPVKVCTL 322
           R+++R+MP F+RK+ A    +K+ T+
Sbjct: 291 RSNLRLMPDFQRKEMAAKLAMKMATM 316


>01_03_0231 +
           14014243-14014390,14015053-14015141,14017859-14017949,
           14018088-14018215,14018703-14018784,14019022-14019081,
           14019160-14019251,14019342-14019462,14019873-14019928,
           14020193-14020272,14020774-14020820,14020940-14020989,
           14021304-14021366,14021515-14021595,14021703-14021717,
           14021875-14021985,14022072-14022147,14022350-14022492,
           14022721-14022794,14023364-14023454,14023589-14023687
          Length = 598

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = +1

Query: 517 LHVTLQVVSRGRGRRTDPGGHTAPAVPPGEAGDIKHGHLLSPEASVLLA 663
           LH  L+   R    R   GG  APA PPG+   +    +L  +   LLA
Sbjct: 15  LHAILRTAHRRCCTRPIGGGLDAPAAPPGDLRTLSGVGMLIHQFKALLA 63


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,231,321
Number of Sequences: 37544
Number of extensions: 523528
Number of successful extensions: 1226
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)