Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_C21
(900 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80439-6|AAB37642.1| 564|Caenorhabditis elegans Ezrin/radixin/m... 147 1e-35
U80439-5|AAB37643.1| 563|Caenorhabditis elegans Ezrin/radixin/m... 147 1e-35
AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein. 147 1e-35
AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein. 147 1e-35
AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein. 147 1e-35
AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv prot... 147 1e-35
AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein. 147 1e-35
AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein. 147 1e-35
AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein. 147 1e-35
U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatos... 121 8e-28
U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatos... 121 8e-28
U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatos... 121 8e-28
U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain (pr... 59 5e-09
U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain (pr... 59 5e-09
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U80443-5|AAD32269.1| 635|Caenorhabditis elegans Ferm domain (pr... 40 0.003
U80443-6|AAK68201.1| 643|Caenorhabditis elegans Ferm domain (pr... 36 0.052
AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain (... 34 0.12
AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical ... 33 0.21
AY204174-1|AAO39178.1| 344|Caenorhabditis elegans nuclear recep... 30 2.0
AY204173-1|AAO39177.1| 369|Caenorhabditis elegans nuclear recep... 30 2.0
AF043694-2|AAT27251.1| 387|Caenorhabditis elegans Nuclear hormo... 30 2.0
AF043694-1|AAC24283.1| 412|Caenorhabditis elegans Nuclear hormo... 30 2.0
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 29 3.4
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 29 3.4
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 29 3.4
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 29 3.4
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 29 3.4
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 29 3.4
AF106575-12|AAC78165.1| 374|Caenorhabditis elegans Hypothetical... 28 7.9
>U80439-6|AAB37642.1| 564|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform b protein.
Length = 564
Score = 147 bits (356), Expect = 1e-35
Identities = 80/188 (42%), Positives = 110/188 (58%), Gaps = 2/188 (1%)
Frame = +2
Query: 287 AAKSFPVKVCTLDAELEFNLEWRATGRDLFDLVCRTIGLRETWFFGLQFEDTKHFISWLK 466
AA V+V ++D+ELEF ++ TG+ LFD V +TIGLRE W+FGLQ+ D K F +WLK
Sbjct: 3 AAGDINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLK 62
Query: 467 LDKRVQDQCVSQMPGTPFMLLCKLYPEDVAEELIQEVTQHLLFLQVKQAILSMDIYCPPR 646
L+K+V Q V + P F K YPEDVAEE+IQ+VT L +LQVK ILS +IYCPP
Sbjct: 63 LNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPE 122
Query: 647 LPSYWPVTLYKLIWRL*REPPTS--PGCWPAXXLLPQRVIXQYXMTPGNXGGQGSKIWYA 820
+ Y + + P + GC A LLPQRV+ Q+ + + W+A
Sbjct: 123 TSVL--LASYAMQAKYGDYVPETHVAGCLTADRLLPQRVLGQFKLN-SEEWERRIMTWWA 179
Query: 821 XPKGXSRD 844
+ +R+
Sbjct: 180 DHRATTRE 187
>U80439-5|AAB37643.1| 563|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform a protein.
Length = 563
Score = 147 bits (356), Expect = 1e-35
Identities = 79/186 (42%), Positives = 110/186 (59%), Gaps = 2/186 (1%)
Frame = +2
Query: 293 KSFPVKVCTLDAELEFNLEWRATGRDLFDLVCRTIGLRETWFFGLQFEDTKHFISWLKLD 472
K+ V+V ++D+ELEF ++ TG+ LFD V +TIGLRE W+FGLQ+ D K F +WLKL+
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLN 63
Query: 473 KRVQDQCVSQMPGTPFMLLCKLYPEDVAEELIQEVTQHLLFLQVKQAILSMDIYCPPRLP 652
K+V Q V + P F K YPEDVAEE+IQ+VT L +LQVK ILS +IYCPP
Sbjct: 64 KKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETS 123
Query: 653 SYWPVTLYKLIWRL*REPPTS--PGCWPAXXLLPQRVIXQYXMTPGNXGGQGSKIWYAXP 826
+ Y + + P + GC A LLPQRV+ Q+ + + W+A
Sbjct: 124 VL--LASYAMQAKYGDYVPETHVAGCLTADRLLPQRVLGQFKLN-SEEWERRIMTWWADH 180
Query: 827 KGXSRD 844
+ +R+
Sbjct: 181 RATTRE 186
>AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein.
Length = 566
Score = 147 bits (356), Expect = 1e-35
Identities = 79/186 (42%), Positives = 110/186 (59%), Gaps = 2/186 (1%)
Frame = +2
Query: 293 KSFPVKVCTLDAELEFNLEWRATGRDLFDLVCRTIGLRETWFFGLQFEDTKHFISWLKLD 472
K+ V+V ++D+ELEF ++ TG+ LFD V +TIGLRE W+FGLQ+ D K F +WLKL+
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLN 63
Query: 473 KRVQDQCVSQMPGTPFMLLCKLYPEDVAEELIQEVTQHLLFLQVKQAILSMDIYCPPRLP 652
K+V Q V + P F K YPEDVAEE+IQ+VT L +LQVK ILS +IYCPP
Sbjct: 64 KKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETS 123
Query: 653 SYWPVTLYKLIWRL*REPPTS--PGCWPAXXLLPQRVIXQYXMTPGNXGGQGSKIWYAXP 826
+ Y + + P + GC A LLPQRV+ Q+ + + W+A
Sbjct: 124 VL--LASYAMQAKYGDYVPETHVAGCLTADRLLPQRVLGQFKLN-SEEWERRIMTWWADH 180
Query: 827 KGXSRD 844
+ +R+
Sbjct: 181 RATTRE 186
>AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 147 bits (356), Expect = 1e-35
Identities = 79/186 (42%), Positives = 110/186 (59%), Gaps = 2/186 (1%)
Frame = +2
Query: 293 KSFPVKVCTLDAELEFNLEWRATGRDLFDLVCRTIGLRETWFFGLQFEDTKHFISWLKLD 472
K+ V+V ++D+ELEF ++ TG+ LFD V +TIGLRE W+FGLQ+ D K F +WLKL+
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLN 63
Query: 473 KRVQDQCVSQMPGTPFMLLCKLYPEDVAEELIQEVTQHLLFLQVKQAILSMDIYCPPRLP 652
K+V Q V + P F K YPEDVAEE+IQ+VT L +LQVK ILS +IYCPP
Sbjct: 64 KKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETS 123
Query: 653 SYWPVTLYKLIWRL*REPPTS--PGCWPAXXLLPQRVIXQYXMTPGNXGGQGSKIWYAXP 826
+ Y + + P + GC A LLPQRV+ Q+ + + W+A
Sbjct: 124 VL--LASYAMQAKYGDYVPETHVAGCLTADRLLPQRVLGQFKLN-SEEWERRIMTWWADH 180
Query: 827 KGXSRD 844
+ +R+
Sbjct: 181 RATTRE 186
>AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 147 bits (356), Expect = 1e-35
Identities = 80/188 (42%), Positives = 110/188 (58%), Gaps = 2/188 (1%)
Frame = +2
Query: 287 AAKSFPVKVCTLDAELEFNLEWRATGRDLFDLVCRTIGLRETWFFGLQFEDTKHFISWLK 466
AA V+V ++D+ELEF ++ TG+ LFD V +TIGLRE W+FGLQ+ D K F +WLK
Sbjct: 3 AAGDINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLK 62
Query: 467 LDKRVQDQCVSQMPGTPFMLLCKLYPEDVAEELIQEVTQHLLFLQVKQAILSMDIYCPPR 646
L+K+V Q V + P F K YPEDVAEE+IQ+VT L +LQVK ILS +IYCPP
Sbjct: 63 LNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPE 122
Query: 647 LPSYWPVTLYKLIWRL*REPPTS--PGCWPAXXLLPQRVIXQYXMTPGNXGGQGSKIWYA 820
+ Y + + P + GC A LLPQRV+ Q+ + + W+A
Sbjct: 123 TSVL--LASYAMQAKYGDYVPETHVAGCLTADRLLPQRVLGQFKLN-SEEWERRIMTWWA 179
Query: 821 XPKGXSRD 844
+ +R+
Sbjct: 180 DHRATTRE 187
>AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv
protein.
Length = 566
Score = 147 bits (356), Expect = 1e-35
Identities = 79/186 (42%), Positives = 110/186 (59%), Gaps = 2/186 (1%)
Frame = +2
Query: 293 KSFPVKVCTLDAELEFNLEWRATGRDLFDLVCRTIGLRETWFFGLQFEDTKHFISWLKLD 472
K+ V+V ++D+ELEF ++ TG+ LFD V +TIGLRE W+FGLQ+ D K F +WLKL+
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLN 63
Query: 473 KRVQDQCVSQMPGTPFMLLCKLYPEDVAEELIQEVTQHLLFLQVKQAILSMDIYCPPRLP 652
K+V Q V + P F K YPEDVAEE+IQ+VT L +LQVK ILS +IYCPP
Sbjct: 64 KKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETS 123
Query: 653 SYWPVTLYKLIWRL*REPPTS--PGCWPAXXLLPQRVIXQYXMTPGNXGGQGSKIWYAXP 826
+ Y + + P + GC A LLPQRV+ Q+ + + W+A
Sbjct: 124 VL--LASYAMQAKYGDYVPETHVAGCLTADRLLPQRVLGQFKLN-SEEWERRIMTWWADH 180
Query: 827 KGXSRD 844
+ +R+
Sbjct: 181 RATTRE 186
>AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 147 bits (356), Expect = 1e-35
Identities = 79/186 (42%), Positives = 110/186 (59%), Gaps = 2/186 (1%)
Frame = +2
Query: 293 KSFPVKVCTLDAELEFNLEWRATGRDLFDLVCRTIGLRETWFFGLQFEDTKHFISWLKLD 472
K+ V+V ++D+ELEF ++ TG+ LFD V +TIGLRE W+FGLQ+ D K F +WLKL+
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLN 63
Query: 473 KRVQDQCVSQMPGTPFMLLCKLYPEDVAEELIQEVTQHLLFLQVKQAILSMDIYCPPRLP 652
K+V Q V + P F K YPEDVAEE+IQ+VT L +LQVK ILS +IYCPP
Sbjct: 64 KKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETS 123
Query: 653 SYWPVTLYKLIWRL*REPPTS--PGCWPAXXLLPQRVIXQYXMTPGNXGGQGSKIWYAXP 826
+ Y + + P + GC A LLPQRV+ Q+ + + W+A
Sbjct: 124 VL--LASYAMQAKYGDYVPETHVAGCLTADRLLPQRVLGQFKLN-SEEWERRIMTWWADH 180
Query: 827 KGXSRD 844
+ +R+
Sbjct: 181 RATTRE 186
>AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 147 bits (356), Expect = 1e-35
Identities = 80/188 (42%), Positives = 110/188 (58%), Gaps = 2/188 (1%)
Frame = +2
Query: 287 AAKSFPVKVCTLDAELEFNLEWRATGRDLFDLVCRTIGLRETWFFGLQFEDTKHFISWLK 466
AA V+V ++D+ELEF ++ TG+ LFD V +TIGLRE W+FGLQ+ D K F +WLK
Sbjct: 3 AAGDINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLK 62
Query: 467 LDKRVQDQCVSQMPGTPFMLLCKLYPEDVAEELIQEVTQHLLFLQVKQAILSMDIYCPPR 646
L+K+V Q V + P F K YPEDVAEE+IQ+VT L +LQVK ILS +IYCPP
Sbjct: 63 LNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPE 122
Query: 647 LPSYWPVTLYKLIWRL*REPPTS--PGCWPAXXLLPQRVIXQYXMTPGNXGGQGSKIWYA 820
+ Y + + P + GC A LLPQRV+ Q+ + + W+A
Sbjct: 123 TSVL--LASYAMQAKYGDYVPETHVAGCLTADRLLPQRVLGQFKLN-SEEWERRIMTWWA 179
Query: 821 XPKGXSRD 844
+ +R+
Sbjct: 180 DHRATTRE 187
>AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 147 bits (356), Expect = 1e-35
Identities = 79/186 (42%), Positives = 110/186 (59%), Gaps = 2/186 (1%)
Frame = +2
Query: 293 KSFPVKVCTLDAELEFNLEWRATGRDLFDLVCRTIGLRETWFFGLQFEDTKHFISWLKLD 472
K+ V+V ++D+ELEF ++ TG+ LFD V +TIGLRE W+FGLQ+ D K F +WLKL+
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREIWYFGLQYTDNKGFPTWLKLN 63
Query: 473 KRVQDQCVSQMPGTPFMLLCKLYPEDVAEELIQEVTQHLLFLQVKQAILSMDIYCPPRLP 652
K+V Q V + P F K YPEDVAEE+IQ+VT L +LQVK ILS +IYCPP
Sbjct: 64 KKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLFYLQVKDGILSDEIYCPPETS 123
Query: 653 SYWPVTLYKLIWRL*REPPTS--PGCWPAXXLLPQRVIXQYXMTPGNXGGQGSKIWYAXP 826
+ Y + + P + GC A LLPQRV+ Q+ + + W+A
Sbjct: 124 VL--LASYAMQAKYGDYVPETHVAGCLTADRLLPQRVLGQFKLN-SEEWERRIMTWWADH 180
Query: 827 KGXSRD 844
+ +R+
Sbjct: 181 RATTRE 186
>U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform c protein.
Length = 641
Score = 121 bits (291), Expect = 8e-28
Identities = 77/189 (40%), Positives = 104/189 (55%), Gaps = 5/189 (2%)
Frame = +2
Query: 293 KSFPVKVCTLDAELE-FNLEWRATGRDLFDLVCRTIGLRETWFFGLQFEDTKHFISWLKL 469
K KV T+DA+LE +E TGR LF+ VCR IGLRETW+FGLQF + K+ WL+
Sbjct: 12 KPIYAKVSTMDADLEKIVIEKTWTGRHLFEAVCRIIGLRETWYFGLQFTNKKNIPCWLQN 71
Query: 470 DKRV--QDQCVSQMPGT-PFMLLCKLYPEDVAEELIQEVTQHLLFLQVKQAILSMDIYCP 640
DK + QD GT F+ L K YPEDV E+I + T+HL FLQ+++AILSM++YC
Sbjct: 72 DKTICGQDIQKDTSDGTFNFLFLVKFYPEDVEPEIILDATRHLFFLQIREAILSMNLYCS 131
Query: 641 PRLPSYWPVTLYKL-IWRL*REPPTSPGCWPAXXLLPQRVIXQYXMTPGNXGGQGSKIWY 817
P V L + + + G LP+ VI QY M+ + K W+
Sbjct: 132 PEA----SVLLASFAVQAMHGDCTEEVGPIDLDKHLPKSVIDQYDMS-ADMWRDRIKRWW 186
Query: 818 AXPKGXSRD 844
+ G SR+
Sbjct: 187 SRNAGQSRE 195
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1
Query: 637 SPEASVLLASYAVQA 681
SPEASVLLAS+AVQA
Sbjct: 131 SPEASVLLASFAVQA 145
>U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform b protein.
Length = 709
Score = 121 bits (291), Expect = 8e-28
Identities = 77/189 (40%), Positives = 104/189 (55%), Gaps = 5/189 (2%)
Frame = +2
Query: 293 KSFPVKVCTLDAELE-FNLEWRATGRDLFDLVCRTIGLRETWFFGLQFEDTKHFISWLKL 469
K KV T+DA+LE +E TGR LF+ VCR IGLRETW+FGLQF + K+ WL+
Sbjct: 12 KPIYAKVSTMDADLEKIVIEKTWTGRHLFEAVCRIIGLRETWYFGLQFTNKKNIPCWLQN 71
Query: 470 DKRV--QDQCVSQMPGT-PFMLLCKLYPEDVAEELIQEVTQHLLFLQVKQAILSMDIYCP 640
DK + QD GT F+ L K YPEDV E+I + T+HL FLQ+++AILSM++YC
Sbjct: 72 DKTICGQDIQKDTSDGTFNFLFLVKFYPEDVEPEIILDATRHLFFLQIREAILSMNLYCS 131
Query: 641 PRLPSYWPVTLYKL-IWRL*REPPTSPGCWPAXXLLPQRVIXQYXMTPGNXGGQGSKIWY 817
P V L + + + G LP+ VI QY M+ + K W+
Sbjct: 132 PEA----SVLLASFAVQAMHGDCTEEVGPIDLDKHLPKSVIDQYDMS-ADMWRDRIKRWW 186
Query: 818 AXPKGXSRD 844
+ G SR+
Sbjct: 187 SRNAGQSRE 195
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1
Query: 637 SPEASVLLASYAVQA 681
SPEASVLLAS+AVQA
Sbjct: 131 SPEASVLLASFAVQA 145
>U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform a protein.
Length = 654
Score = 121 bits (291), Expect = 8e-28
Identities = 77/189 (40%), Positives = 104/189 (55%), Gaps = 5/189 (2%)
Frame = +2
Query: 293 KSFPVKVCTLDAELE-FNLEWRATGRDLFDLVCRTIGLRETWFFGLQFEDTKHFISWLKL 469
K KV T+DA+LE +E TGR LF+ VCR IGLRETW+FGLQF + K+ WL+
Sbjct: 12 KPIYAKVSTMDADLEKIVIEKTWTGRHLFEAVCRIIGLRETWYFGLQFTNKKNIPCWLQN 71
Query: 470 DKRV--QDQCVSQMPGT-PFMLLCKLYPEDVAEELIQEVTQHLLFLQVKQAILSMDIYCP 640
DK + QD GT F+ L K YPEDV E+I + T+HL FLQ+++AILSM++YC
Sbjct: 72 DKTICGQDIQKDTSDGTFNFLFLVKFYPEDVEPEIILDATRHLFFLQIREAILSMNLYCS 131
Query: 641 PRLPSYWPVTLYKL-IWRL*REPPTSPGCWPAXXLLPQRVIXQYXMTPGNXGGQGSKIWY 817
P V L + + + G LP+ VI QY M+ + K W+
Sbjct: 132 PEA----SVLLASFAVQAMHGDCTEEVGPIDLDKHLPKSVIDQYDMS-ADMWRDRIKRWW 186
Query: 818 AXPKGXSRD 844
+ G SR+
Sbjct: 187 SRNAGQSRE 195
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1
Query: 637 SPEASVLLASYAVQA 681
SPEASVLLAS+AVQA
Sbjct: 131 SPEASVLLASFAVQA 145
>U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform a protein.
Length = 573
Score = 58.8 bits (136), Expect = 5e-09
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Frame = +2
Query: 308 KVCTLD-AELEFNLEWRATGRDLFDLVCRTIGLRETWFFGLQFEDTKHFISWLKLDKRVQ 484
KV LD A L + A G +L++ V ++ L E +FGLQ+ D + WL K+V
Sbjct: 38 KVLLLDGAHLNIVVPRNAVGSELYEEVFYSLDLEERDYFGLQYTDPFNVQHWLDPTKKVA 97
Query: 485 DQCVSQMPGTPFMLLCKLYPEDVAEELIQEVTQHLLFLQVKQAILSMDIYCPPRL 649
Q P T K + + + L +E+T++ FLQ+KQ I S + CP +L
Sbjct: 98 KQVAIGPPFT-LRFRVKFFTSEPSSNLKEELTRYQFFLQIKQDISSGRLQCPHQL 151
>U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform b protein.
Length = 589
Score = 58.8 bits (136), Expect = 5e-09
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Frame = +2
Query: 308 KVCTLD-AELEFNLEWRATGRDLFDLVCRTIGLRETWFFGLQFEDTKHFISWLKLDKRVQ 484
KV LD A L + A G +L++ V ++ L E +FGLQ+ D + WL K+V
Sbjct: 54 KVLLLDGAHLNIVVPRNAVGSELYEEVFYSLDLEERDYFGLQYTDPFNVQHWLDPTKKVA 113
Query: 485 DQCVSQMPGTPFMLLCKLYPEDVAEELIQEVTQHLLFLQVKQAILSMDIYCPPRL 649
Q P T K + + + L +E+T++ FLQ+KQ I S + CP +L
Sbjct: 114 KQVAIGPPFT-LRFRVKFFTSEPSSNLKEELTRYQFFLQIKQDISSGRLQCPHQL 167
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 54.4 bits (125), Expect = 1e-07
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Frame = +2
Query: 338 FNLEWRATGRDLFDLVCRTIGLRETWFFGLQFEDTKHFISWLKLDKRVQDQCVSQMPGTP 517
F L+ +A G+ L D VCR + L E +FGL F D WL +K + Q +
Sbjct: 59 FLLQHKAIGQTLLDEVCRHLNLLECDYFGLSFIDINGNHCWLDREKTILRQITNGSTDAK 118
Query: 518 FMLLCKLY-PEDVAEELIQEVTQHLLFLQVKQAILSMDIYC 637
F + K Y P + +L +E T++L +Q+K+ + +++C
Sbjct: 119 FYFVVKFYTPNPI--DLEEEYTRYLFTMQIKRDLALGELHC 157
>U80443-5|AAD32269.1| 635|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 4,
isoform a protein.
Length = 635
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +2
Query: 359 TGRDLFDLVCRTIGLRETWFFGLQFEDTKHFISWLKLDKRVQDQCVS-QMPGTPFMLLCK 535
+ + + D VC+ ++E F GL+++D WL L + + + + L +
Sbjct: 50 SAQTILDYVCQLKHIQEKDFLGLRYQDHHKHRYWLDLTRSINHVVKNFKTESMTLHLRFR 109
Query: 536 LYPEDVAEELIQEVTQHLLFLQVKQAILSMDIYCP 640
YP D A L ++ LF+Q+++ +L +YCP
Sbjct: 110 YYPSDPA-RLRDPNLRYQLFVQLQRDLLHGRLYCP 143
>U80443-6|AAK68201.1| 643|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 4,
isoform b protein.
Length = 643
Score = 35.5 bits (78), Expect = 0.052
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Frame = +2
Query: 359 TGRDLFDLVCRTIGLRETWFFGLQFEDTKHFISWLKLDKRV---------QDQCVSQMPG 511
+ + + D VC+ ++E F GL+++D WL L + + + + V +
Sbjct: 50 SAQTILDYVCQLKHIQEKDFLGLRYQDHHKHRYWLDLTRSINHVVKNFKKEIKKVGKTES 109
Query: 512 TPFMLLCKLYPEDVAEELIQEVTQHLLFLQVKQAILSMDIYCP 640
L + YP D A L ++ LF+Q+++ +L +YCP
Sbjct: 110 MTLHLRFRYYPSDPA-RLRDPNLRYQLFVQLQRDLLHGRLYCP 151
>AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 5
protein.
Length = 1434
Score = 34.3 bits (75), Expect = 0.12
Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Frame = +2
Query: 230 FFL*TRN-DIRIMPPFRRKKAAKSFPVKVCTLDAEL------EFNLEWRATGRDLFDLVC 388
FF TR+ +IR+ P +KK V+ + EL E RD+F L+
Sbjct: 539 FFDLTRHQNIRLRAPATKKKRISLHRVEDTEVVVELLNGQKVEVACRSDVISRDVFSLIV 598
Query: 389 RTIGLRETWFFGLQF-EDTKHFI--SWLKLDKRVQD--QCVSQM-PGTPFM--LLCKLYP 544
+ + + E FFGL F D +H+ +L+K + V+++ P++ L K YP
Sbjct: 599 QNMNINEHVFFGLSFLRDGEHYFIEDHQRLEKFAPSGWKSVARVGVKVPYVLHLRFKFYP 658
Query: 545 EDVAEELIQEVTQHLLFLQVKQAIL 619
+ + + + +VT + L+LQ ++ +L
Sbjct: 659 Q-ILDFIKTDVTMNELYLQCRRDVL 682
>AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical
protein Y38C1AB.4 protein.
Length = 1393
Score = 33.5 bits (73), Expect = 0.21
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Frame = +2
Query: 230 FFL*TRN-DIRIMPPFRRKKAAKSFPVKVCTLDAEL------EFNLEWRATGRDLFDLVC 388
FF TR+ +IR+ P +KK V+ EL E RD+F L+
Sbjct: 498 FFDLTRHQNIRLRAPATKKKRISLHRVEDTEAVVELLNGQKVEVACRSDVISRDVFSLIV 557
Query: 389 RTIGLRETWFFGLQF-EDTKHFI--SWLKLDKRVQD--QCVSQM-PGTPFM--LLCKLYP 544
+ + + E FFGL F D +H+ +L+K + V+++ P++ L K YP
Sbjct: 558 QNMNINEHVFFGLSFLRDGEHYFIEDHQRLEKFAPSGWKSVARVGVKVPYVLHLRFKFYP 617
Query: 545 EDVAEELIQEVTQHLLFLQVKQAIL 619
+ + + + +VT + L+LQ ++ +L
Sbjct: 618 Q-ILDFIKTDVTMNELYLQCRRDVL 641
>AY204174-1|AAO39178.1| 344|Caenorhabditis elegans nuclear receptor
NHR-64 protein.
Length = 344
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2
Query: 470 PISASL*NVLCLRIGDRRTMFHVGQLSC 387
P S+S NV C GDR T H G +SC
Sbjct: 17 PQSSSFENVFCAICGDRATGKHYGAMSC 44
>AY204173-1|AAO39177.1| 369|Caenorhabditis elegans nuclear receptor
NHR-64 protein.
Length = 369
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2
Query: 470 PISASL*NVLCLRIGDRRTMFHVGQLSC 387
P S+S NV C GDR T H G +SC
Sbjct: 17 PQSSSFENVFCAICGDRATGKHYGAMSC 44
>AF043694-2|AAT27251.1| 387|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 64, isoform b protein.
Length = 387
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2
Query: 470 PISASL*NVLCLRIGDRRTMFHVGQLSC 387
P S+S NV C GDR T H G +SC
Sbjct: 60 PQSSSFENVFCAICGDRATGKHYGAMSC 87
>AF043694-1|AAC24283.1| 412|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 64, isoform a protein.
Length = 412
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2
Query: 470 PISASL*NVLCLRIGDRRTMFHVGQLSC 387
P S+S NV C GDR T H G +SC
Sbjct: 60 PQSSSFENVFCAICGDRATGKHYGAMSC 87
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +1
Query: 454 KLAEIGQESTRPMRLPNARYSLHVTLQVVSRGRGRRTDPGGHTAPAVP 597
++A I +ES PMR Y+ V +G R PG APA P
Sbjct: 831 RVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPP 878
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +1
Query: 454 KLAEIGQESTRPMRLPNARYSLHVTLQVVSRGRGRRTDPGGHTAPAVP 597
++A I +ES PMR Y+ V +G R PG APA P
Sbjct: 434 RVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPP 481
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +1
Query: 454 KLAEIGQESTRPMRLPNARYSLHVTLQVVSRGRGRRTDPGGHTAPAVP 597
++A I +ES PMR Y+ V +G R PG APA P
Sbjct: 794 RVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPP 841
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +1
Query: 454 KLAEIGQESTRPMRLPNARYSLHVTLQVVSRGRGRRTDPGGHTAPAVP 597
++A I +ES PMR Y+ V +G R PG APA P
Sbjct: 306 RVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPP 353
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +1
Query: 454 KLAEIGQESTRPMRLPNARYSLHVTLQVVSRGRGRRTDPGGHTAPAVP 597
++A I +ES PMR Y+ V +G R PG APA P
Sbjct: 831 RVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPP 878
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +1
Query: 454 KLAEIGQESTRPMRLPNARYSLHVTLQVVSRGRGRRTDPGGHTAPAVP 597
++A I +ES PMR Y+ V +G R PG APA P
Sbjct: 434 RVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPP 481
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +1
Query: 454 KLAEIGQESTRPMRLPNARYSLHVTLQVVSRGRGRRTDPGGHTAPAVP 597
++A I +ES PMR Y+ V +G R PG APA P
Sbjct: 794 RVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPP 841
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +1
Query: 454 KLAEIGQESTRPMRLPNARYSLHVTLQVVSRGRGRRTDPGGHTAPAVP 597
++A I +ES PMR Y+ V +G R PG APA P
Sbjct: 306 RVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPP 353
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +1
Query: 454 KLAEIGQESTRPMRLPNARYSLHVTLQVVSRGRGRRTDPGGHTAPAVP 597
++A I +ES PMR Y+ V +G R PG APA P
Sbjct: 434 RVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPP 481
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +1
Query: 454 KLAEIGQESTRPMRLPNARYSLHVTLQVVSRGRGRRTDPGGHTAPAVP 597
++A I +ES PMR Y+ V +G R PG APA P
Sbjct: 773 RVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPP 820
>AF106575-12|AAC78165.1| 374|Caenorhabditis elegans Hypothetical
protein K04F1.6 protein.
Length = 374
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 186 TNYTATSPVYVMNTR*RNACNFTLRTISSGYYLQTRKTSMK 64
TN+ +Y M T R+ CNFT +ISSG Q + ++K
Sbjct: 204 TNFIINRNLY-MKTLPRHFCNFTGDSISSGKVCQFEELTLK 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,260,513
Number of Sequences: 27780
Number of extensions: 437763
Number of successful extensions: 1202
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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