Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_C20
         (789 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677...    32   0.60 
01_01_0083 + 631196-631675                                             24   9.3  
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646...    28   9.7  

>01_07_0188 -
           41866689-41866763,41866889-41867155,41867277-41867722,
           41867945-41868033,41868279-41868368,41868661-41868739,
           41868979-41869042,41869597-41869684,41869776-41869836,
           41869906-41869969,41870134-41870188,41870275-41870346,
           41870469-41870551,41870629-41870724,41871279-41871383,
           41872159-41872227,41872470-41872561,41872667-41872886
          Length = 704

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -2

Query: 752 PPPXXXXXXPPPPXXGGGGXXFFF 681
           PPP      PPPP  GGGG   F+
Sbjct: 9   PPPPPPPQHPPPPQAGGGGGGEFY 32



 Score = 27.9 bits (59), Expect = 9.7
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -1

Query: 753 PPPXXXXXXXPPPXXGGGGGXFFFF 679
           PPP       PPP   GGGG   F+
Sbjct: 8   PPPPPPPPQHPPPPQAGGGGGGEFY 32


>01_01_0083 + 631196-631675
          Length = 159

 Score = 23.8 bits (49), Expect(2) = 9.3
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -1

Query: 753 PPPXXXXXXXPPPXXGGGG 697
           PP        PPP  GGGG
Sbjct: 68  PPSSSSYWNYPPPQGGGGG 86



 Score = 22.6 bits (46), Expect(2) = 9.3
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 723 PPPXXGGGGGXF 688
           PP   GGGGG F
Sbjct: 93  PPAGGGGGGGGF 104


>04_03_0660 +
           18463011-18463322,18463424-18463516,18464500-18464607,
           18464892-18465044,18465256-18465354,18465443-18465571,
           18465987-18466166,18466208-18466246,18466247-18466363,
           18466445-18466609
          Length = 464

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -2

Query: 752 PPPXXXXXXPPPPXXGGGG 696
           PPP      PPPP   GGG
Sbjct: 57  PPPTQPAPPPPPPARSGGG 75


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,296,625
Number of Sequences: 37544
Number of extensions: 243925
Number of successful extensions: 1397
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)