Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_C19
(897 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1751 - 29215074-29216270 37 0.019
03_02_0765 + 11000724-11002496 36 0.058
07_03_1136 + 24218601-24218734,24218769-24219906 33 0.41
07_03_0558 + 19461369-19462448 31 0.94
07_03_0177 - 14770777-14772045 31 1.2
12_02_0299 - 17051570-17052474,17053542-17053755 31 1.6
02_04_0122 - 19959137-19960043,19960150-19960714,19960932-19961202 31 1.6
10_08_0233 - 16061182-16061714,16062765-16063578 30 2.2
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 30 2.2
06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979 30 2.9
02_04_0056 + 19313422-19313967,19314035-19314168,19314263-193143... 30 2.9
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 29 3.8
09_06_0123 - 20997498-20997512,20998015-20998100,20999066-209991... 29 3.8
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 29 5.0
05_03_0039 - 7621613-7622695 29 6.6
03_02_0514 + 9038606-9039790,9040211-9040432,9040548-9040655,904... 29 6.6
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 29 6.6
02_01_0706 + 5270233-5270326,5270767-5270914,5271018-5271089,527... 29 6.6
01_01_0570 - 4231100-4232560 29 6.6
10_07_0170 - 13777590-13777973,13778073-13778339 28 8.8
08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983 28 8.8
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 28 8.8
02_05_0686 - 30900748-30902167,30903442-30904742 28 8.8
>07_03_1751 - 29215074-29216270
Length = 398
Score = 37.1 bits (82), Expect = 0.019
Identities = 34/107 (31%), Positives = 36/107 (33%), Gaps = 1/107 (0%)
Frame = -2
Query: 896 GGGGXXGLGNXPGGGRXXPXXF-KGKKGEFXLXPPXWKKXGXXGFFXGXKPGXFLXSXGV 720
G GG G+G GGG F GK G F G G F G K G F G
Sbjct: 272 GAGGGGGIGGGAGGGAGAGGGFGGGKGGGFGGGGGGGGGAGAGGGFGGGKGGGFGGGFGG 331
Query: 719 XPPXXXGGXFFXVXLGGGGXWGKXXXKGRFXGXGXXXGLXXKIFXGG 579
GG GGGG G G G G G+ GG
Sbjct: 332 GKGGGVGGG-AGGGFGGGGGAGAGGGFGGGKGGGFGGGVGGGHGAGG 377
>03_02_0765 + 11000724-11002496
Length = 590
Score = 35.5 bits (78), Expect = 0.058
Identities = 34/106 (32%), Positives = 36/106 (33%)
Frame = -2
Query: 896 GGGGXXGLGNXPGGGRXXPXXFKGKKGEFXLXPPXWKKXGXXGFFXGXKPGXFLXSXGVX 717
GGGG G G GGG F G G G G F G K G G+
Sbjct: 43 GGGGGFGGGGGLGGGGGAGGGFGGGLGH---------GGGLGGGFGGGKGGGLGGGGGLG 93
Query: 716 PPXXXGGXFFXVXLGGGGXWGKXXXKGRFXGXGXXXGLXXKIFXGG 579
GG F LG GG G G+ G G GL GG
Sbjct: 94 GGGGAGGG-FGGGLGHGGGLGGGFGGGKGGGLGGGGGLGGGAGGGG 138
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 32.7 bits (71), Expect = 0.41
Identities = 36/106 (33%), Positives = 37/106 (34%)
Frame = -2
Query: 896 GGGGXXGLGNXPGGGRXXPXXFKGKKGEFXLXPPXWKKXGXXGFFXGXKPGXFLXSXGVX 717
GGGG L PGGGR G G PP G G G PG G
Sbjct: 150 GGGGGGALARPPGGGRG------GALGR----PPG---GGGGGGGPGRAPGG--GGGGGG 194
Query: 716 PPXXXGGXFFXVXLGGGGXWGKXXXKGRFXGXGXXXGLXXKIFXGG 579
P GG LGGGG G+ R G G G K GG
Sbjct: 195 PGRAPGGGGGGGGLGGGG--GEGGAPERVIGGGGGGGGALKCVVGG 238
>07_03_0558 + 19461369-19462448
Length = 359
Score = 31.5 bits (68), Expect = 0.94
Identities = 28/97 (28%), Positives = 30/97 (30%)
Frame = -2
Query: 896 GGGGXXGLGNXPGGGRXXPXXFKGKKGEFXLXPPXWKKXGXXGFFXGXKPGXFLXSXGVX 717
GGGG GLG GGG G G + G G G G + G
Sbjct: 102 GGGGGGGLGGGQGGGFGGGAGAGGGAGGGLGGGGGFGGGGGGGLGGGGGHGGGFGAGGGV 161
Query: 716 PPXXXGGXFFXVXLGGGGXWGKXXXKGRFXGXGXXXG 606
GG GGGG G G G G G
Sbjct: 162 GGGAGGGVGGGGGFGGGGGGGLGGGHGGGFGGGAGVG 198
>07_03_0177 - 14770777-14772045
Length = 422
Score = 31.1 bits (67), Expect = 1.2
Identities = 33/106 (31%), Positives = 35/106 (33%)
Frame = -2
Query: 896 GGGGXXGLGNXPGGGRXXPXXFKGKKGEFXLXPPXWKKXGXXGFFXGXKPGXFLXSXGVX 717
GGGG G G GGG GK G L K G G F K G G
Sbjct: 304 GGGGGLGGGGGLGGGSGLGGGI-GKGG--GLGGSFGKGGGLGGGF--GKGGGIGGGFGKG 358
Query: 716 PPXXXGGXFFXVXLGGGGXWGKXXXKGRFXGXGXXXGLXXKIFXGG 579
GG GGGG +G G G G G + GG
Sbjct: 359 GGLGGGGGLGGGGGGGGGGFGGGGGSGIGGGFGKGGGFGFGVGGGG 404
Score = 30.7 bits (66), Expect = 1.6
Identities = 32/107 (29%), Positives = 35/107 (32%), Gaps = 1/107 (0%)
Frame = -2
Query: 896 GGGGXXGLGNXPGGGRXXPXXFKGKKGEFXLXPPXWKKXGXXGFFXGXKPGXFLXSXGVX 717
GGGG G G GGG G G+ G G G G L G+
Sbjct: 196 GGGGGLGGGGGLGGGIGKGGGLGGGFGKGGGLGGGGGLGGGGGLGGGIGKGGGL-GGGIG 254
Query: 716 PPXXXGGXF-FXVXLGGGGXWGKXXXKGRFXGXGXXXGLXXKIFXGG 579
GG F LGGGG G G G G G+ GG
Sbjct: 255 KGGGLGGGFGKGGGLGGGGGLGGGEDGGLGGGIGKGGGIGGGFGKGG 301
Score = 30.3 bits (65), Expect = 2.2
Identities = 33/106 (31%), Positives = 39/106 (36%)
Frame = -2
Query: 896 GGGGXXGLGNXPGGGRXXPXXFKGKKGEFXLXPPXWKKXGXXGFFXGXKPGXFLXSXGVX 717
GGGG G G+ GGG G G+ + K G G G K G G+
Sbjct: 310 GGGGGLGGGSGLGGGIGKGGGLGGSFGKGGGLGGGFGKGGGIGGGFG-KGGGLGGGGGLG 368
Query: 716 PPXXXGGXFFXVXLGGGGXWGKXXXKGRFXGXGXXXGLXXKIFXGG 579
GG F GGGG G G+ G G G+ F GG
Sbjct: 369 GGGGGGGGGF----GGGGGSGIGGGFGK--GGGFGFGVGGGGFGGG 408
Score = 29.9 bits (64), Expect = 2.9
Identities = 31/101 (30%), Positives = 34/101 (33%), Gaps = 4/101 (3%)
Frame = -2
Query: 896 GGGGXXGLGNXPGGGRXXPXXF---KGKKGEFXLXPPXWKKXG-XXGFFXGXKPGXFLXS 729
GGGG GLG GGG F G G F K G GF G G +
Sbjct: 86 GGGGGGGLGGGGGGGLGGGGGFGKGGGVGGGFGKGGGFGKGGGFGGGFGKGGGIGGGIGH 145
Query: 728 XGVXPPXXXGGXFFXVXLGGGGXWGKXXXKGRFXGXGXXXG 606
GG + G GG +GK G G G G
Sbjct: 146 GAGGGFGKGGGLGGGIGPGIGGGYGKGGGLGGGIGKGGGLG 186
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/70 (27%), Positives = 23/70 (32%)
Frame = +2
Query: 581 PRKKFXXKGPXXXPXPXNAPFXXFFPKXPPPPXKX*KKXPPXXXXGKPXXKXKXSRAXPP 760
P F P P P P F+P PPPP PP P + PP
Sbjct: 293 PPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPP-----PPPPPPPPSFPWPFPPLAPLFPP 347
Query: 761 XKTPXCXXFS 790
+P +S
Sbjct: 348 YPSPPPSMYS 357
>02_04_0122 - 19959137-19960043,19960150-19960714,19960932-19961202
Length = 580
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 624 TPKTPLXXXFSPXPPPP 674
TPKTP+ F P PPPP
Sbjct: 86 TPKTPVPPPFPPAPPPP 102
>10_08_0233 - 16061182-16061714,16062765-16063578
Length = 448
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +1
Query: 817 PFFPLXKXGXXLPPPGXFPNPXXPPPP 897
P P G PPPG P+P PPPP
Sbjct: 85 PLRPTAATGHCQPPPGFLPSP--PPPP 109
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +2
Query: 551 KXVXPQXGGNPRKKFXXKGPXXXPXPXNAPFXXFFPKXPPPP 676
K P+ G P+ K GP P P + FPK P PP
Sbjct: 197 KPKPPKPGPKPKPKPPKPGPKPKPGPPQPWWPIPFPKPPCPP 238
>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
Length = 304
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 656 PKXPPPPXKX*KKXPPXXXXGKPXXKXKXSRAXPPXKTP 772
P PPPP + K+ PP P K + PP + P
Sbjct: 55 PPPPPPPPQPAKEPPPPTKPKHPKPKQQQHPPPPPPQKP 93
>02_04_0056 +
19313422-19313967,19314035-19314168,19314263-19314398,
19314870-19314923,19314995-19315135,19315220-19315546,
19315647-19315916,19316080-19316226,19316890-19317045,
19317223-19317290,19318210-19318309,19318696-19318985,
19319074-19319274,19319840-19319902,19320263-19320356,
19320964-19321035,19321979-19322077,19322254-19322376
Length = 1006
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 653 FPKXPPPPXKX*KKXPPXXXXGKPXXKXKXSRAXPPXKTP 772
FP PPPP P GKP S PP KTP
Sbjct: 48 FPHGPPPPPPPSPSPSPSPPAGKPTKPHPES--TPPTKTP 85
>12_02_0118 -
13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 29.5 bits (63), Expect = 3.8
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +1
Query: 778 PXFFXXGGYXKNSPFFPLXKXGXXLPPPGXFPNPXXPPPP 897
P F GG N P P PPPG P P PPPP
Sbjct: 41 PPFAPPGG---NGPV-PSSIRAPQAPPPGARPFPGSPPPP 76
>09_06_0123 -
20997498-20997512,20998015-20998100,20999066-20999198,
20999264-20999341,21000130-21000216,21001164-21001254,
21001338-21001488,21001567-21002296,21002404-21002820
Length = 595
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 787 FXXGGYXKNSPFFPLXKXGXXLPPPGXFPNPXXPPPP 897
F Y +++P P + + PG FP P PPPP
Sbjct: 328 FSPRNYPRHTPM-PPQQQQPGIYQPGPFPRPPPPPPP 363
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 826 PLXKXGXXLPPPGXFPNPXXPPPP 897
P + PPP P+P PPPP
Sbjct: 32 PFRRPSPPPPPPSPVPSPAPPPPP 55
>05_03_0039 - 7621613-7622695
Length = 360
Score = 28.7 bits (61), Expect = 6.6
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = +2
Query: 563 PQXGGNPRKKFXXK-GPXXXPXPXNAPFXXFFPKXPPPPXKX*KKXPPXXXXGKPXXKXK 739
P G P+ K K P P P P PK P P K P KP K
Sbjct: 280 PHPGPKPKPKPDPKLEPKPHPEPKPHPMPEPEPKPKPEPKPEPKPYPEPKPKLKPEPKPG 339
Query: 740 XSRAXPPXK 766
PP K
Sbjct: 340 PKPIAPPNK 348
>03_02_0514 +
9038606-9039790,9040211-9040432,9040548-9040655,
9041608-9041802,9041905-9042153,9042525-9042672,
9042673-9042779,9043311-9043475,9044506-9045948
Length = 1273
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -2
Query: 674 GGGGXWGKXXXKGRFXGXGXXXGLXXKIFXGG 579
GGGG WG G G G G +IF GG
Sbjct: 101 GGGGGWGAGGGGGG-GGGGGGGGFWSRIFSGG 131
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 850 LPPPGXFPNPXXPPPP 897
LPPP P P PPPP
Sbjct: 208 LPPPAPVPAPAPPPPP 223
>02_01_0706 +
5270233-5270326,5270767-5270914,5271018-5271089,
5271153-5271263,5271363-5271434,5271533-5271604,
5272126-5272197,5272281-5272346,5272426-5272491,
5272601-5272971,5273203-5273456,5273886-5274157,
5274333-5274474,5275174-5275313,5275381-5275537,
5275797-5275965,5276048-5276088
Length = 772
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/63 (30%), Positives = 23/63 (36%), Gaps = 7/63 (11%)
Frame = +1
Query: 730 EXKXFPGFXPXKNPXLPXFFXXG-----GYXKNSPFFPLXKXGXXLP--PPGXFPNPXXP 888
E F G+ P +P G G+ + SP F P PP P P P
Sbjct: 239 ENNSFSGYVPGTFESIPELRIDGNQFQPGFKRASPSFTRSAHSPPTPHPPPSSPPPPMSP 298
Query: 889 PPP 897
PPP
Sbjct: 299 PPP 301
>01_01_0570 - 4231100-4232560
Length = 486
Score = 28.7 bits (61), Expect = 6.6
Identities = 32/106 (30%), Positives = 34/106 (32%)
Frame = -2
Query: 896 GGGGXXGLGNXPGGGRXXPXXFKGKKGEFXLXPPXWKKXGXXGFFXGXKPGXFLXSXGVX 717
GGGG G G GGG F G G + G G G G L G
Sbjct: 93 GGGGLGGSGGLGGGGMGGSGGFGGGGGG-GVGGGVGAGFGSGG---GVGAGGGLRGGGGV 148
Query: 716 PPXXXGGXFFXVXLGGGGXWGKXXXKGRFXGXGXXXGLXXKIFXGG 579
GG F GGGG G G G G G + GG
Sbjct: 149 GAGGGGG--FGGGAGGGGGIGAGGGFGGGAGAGGGVGGGGRFGGGG 192
>10_07_0170 - 13777590-13777973,13778073-13778339
Length = 216
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 896 GGGGXXGLGNXPGGGRXXP 840
GGGG G+G GGGR P
Sbjct: 46 GGGGGGGVGGGGGGGRPSP 64
>08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983
Length = 145
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 841 GXXLPPPGXFPNPXXPPPP 897
G PP G +P P PPPP
Sbjct: 70 GVYPPPQGPYPPPHQPPPP 88
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 28.3 bits (60), Expect = 8.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 850 LPPPGXFPNPXXPPPP 897
LPPP P P PPPP
Sbjct: 424 LPPPPPLPPPPPPPPP 439
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.3 bits (60), Expect = 8.8
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +3
Query: 540 PKGGNXXXPNXGATPXKNFXXKAPXXXXTPKTPLXXXFSPXPPPPQXNXKKXXPP 704
PK P G P K P PK P SP PPPP K PP
Sbjct: 332 PKAAPPPPPPKGPPPPP--PAKGPPPPPPPKGP-----SPPPPPPPGGKKGGPPP 379
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,367,791
Number of Sequences: 37544
Number of extensions: 251810
Number of successful extensions: 2842
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2429
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -