Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_C17
(927 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016672-3|AAT92072.1| 394|Caenorhabditis elegans Aldehyde dehy... 51 1e-06
AF016672-2|AAO38633.1| 512|Caenorhabditis elegans Aldehyde dehy... 51 1e-06
AF016672-1|AAB66116.3| 563|Caenorhabditis elegans Aldehyde dehy... 51 1e-06
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 30 2.7
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 30 2.7
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 30 2.7
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 29 6.2
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 29 6.2
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 28 8.2
>AF016672-3|AAT92072.1| 394|Caenorhabditis elegans Aldehyde
dehydrogenase protein6, isoform c protein.
Length = 394
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +2
Query: 638 NEPVLGYRAGSRERQDLIEELKRTASVIEDVPIVIAGKNITEXEPPYQVMPPDH 799
NEP+L YR GS+ERQDL L + I +VP+ I K IT QV+P DH
Sbjct: 34 NEPILEYRKGSKERQDLEAALAFYSKNITEVPLRIGDKKITNKLEQKQVIPSDH 87
>AF016672-2|AAO38633.1| 512|Caenorhabditis elegans Aldehyde
dehydrogenase protein6, isoform b protein.
Length = 512
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +2
Query: 638 NEPVLGYRAGSRERQDLIEELKRTASVIEDVPIVIAGKNITEXEPPYQVMPPDH 799
NEP+L YR GS+ERQDL L + I +VP+ I K IT QV+P DH
Sbjct: 34 NEPILEYRKGSKERQDLEAALAFYSKNITEVPLRIGDKKITNKLEQKQVIPSDH 87
>AF016672-1|AAB66116.3| 563|Caenorhabditis elegans Aldehyde
dehydrogenase protein6, isoform a protein.
Length = 563
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/54 (48%), Positives = 32/54 (59%)
Frame = +2
Query: 638 NEPVLGYRAGSRERQDLIEELKRTASVIEDVPIVIAGKNITEXEPPYQVMPPDH 799
NEP+L YR GS+ERQDL L + I +VP+ I K IT QV+P DH
Sbjct: 34 NEPILEYRKGSKERQDLEAALAFYSKNITEVPLRIGDKKITNKLEQKQVIPSDH 87
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +2
Query: 593 SSVVDLPQFQDGSIHNEPVLGYRAGSRERQ-DLIEELK-RTASVIEDVPIVIAGKNITEX 766
SS + PQ Q + E Y +G RQ + +E L+ TAS ++PI GKN T
Sbjct: 25 SSSIGPPQQQSAKLFPEHF--YPSGLSPRQSEALERLRPNTASRERNIPIQFTGKNPTTN 82
Query: 767 EPPYQVMPPDHXQ 805
+ P H Q
Sbjct: 83 SALEEYKPVPHVQ 95
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +2
Query: 593 SSVVDLPQFQDGSIHNEPVLGYRAGSRERQ-DLIEELK-RTASVIEDVPIVIAGKNITEX 766
SS + PQ Q + E Y +G RQ + +E L+ TAS ++PI GKN T
Sbjct: 4 SSSIGPPQQQSAKLFPEHF--YPSGLSPRQSEALERLRPNTASRERNIPIQFTGKNPTTN 61
Query: 767 EPPYQVMPPDHXQ 805
+ P H Q
Sbjct: 62 SALEEYKPVPHVQ 74
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +2
Query: 593 SSVVDLPQFQDGSIHNEPVLGYRAGSRERQ-DLIEELK-RTASVIEDVPIVIAGKNITEX 766
SS + PQ Q + E Y +G RQ + +E L+ TAS ++PI GKN T
Sbjct: 25 SSSIGPPQQQSAKLFPEHF--YPSGLSPRQSEALERLRPNTASRERNIPIQFTGKNPTTN 82
Query: 767 EPPYQVMPPDHXQ 805
+ P H Q
Sbjct: 83 SALEEYKPVPHVQ 95
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 674 ERQDLIEELKRTASVIEDV--PIVIAGKNITEXEPPYQVMPPDHXQKXLXIXXPPVKXTX 847
E + IEE+KR S ++D+ P+ IA +N + E +Q++ DH L I P+
Sbjct: 1256 ELERKIEEIKR-VSTLKDMFGPLPIAKEN-EQTEKDFQILLDDHELTLLTISRDPLNEKY 1313
Query: 848 EGGNXSF 868
+ F
Sbjct: 1314 QEARTEF 1320
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 674 ERQDLIEELKRTASVIEDV--PIVIAGKNITEXEPPYQVMPPDHXQKXLXIXXPPVKXTX 847
E + IEE+KR S ++D+ P+ IA +N + E +Q++ DH L I P+
Sbjct: 1256 ELERKIEEIKR-VSTLKDMFGPLPIAKEN-EQTEKDFQILLDDHELTLLTISRDPLNEKY 1313
Query: 848 EGGNXSF 868
+ F
Sbjct: 1314 QEARTEF 1320
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 674 ERQDLIEELKRTASVIEDV--PIVIAGKNITEXEPPYQVMPPDHXQKXLXIXXPPVKXTX 847
E + IEE+KR S ++D+ P+ IA +N + E +Q++ DH L I P+
Sbjct: 1256 ELERKIEEIKR-VSTLKDMFGPLPIAKEN-EQTEKDFQILLDDHELTLLTISRDPLNEKY 1313
Query: 848 EGGNXSF 868
+ F
Sbjct: 1314 QEARTEF 1320
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +3
Query: 282 FVENFNAATPFS-RNKKEYEIVKVTALFESN-KFFDCRGRTR 401
F+ENF TPFS R + E K TA ++ N KF GR R
Sbjct: 1038 FMENFEGDTPFSQRAECPIEEKKQTAKYDENDKFMFPLGRLR 1079
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,200,617
Number of Sequences: 27780
Number of extensions: 381712
Number of successful extensions: 875
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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