Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_C12
         (1098 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   4.9  
04_03_0904 + 20717005-20718087                                         29   4.9  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 20/80 (25%), Positives = 22/80 (27%)
 Frame = +2

Query: 11  PXXPXXXKXPPXNKXAXXTXXPTPPXXXXXXQXKKXXSXPTYXXXXXPPKTPXPNXRXTX 190
           P  P     P  NK A     P PP            S         PP  P PN     
Sbjct: 545 PPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQP---PPPPPPPPLPNCLVPS 601

Query: 191 KXPPQKXPPXXRQKTXXXHP 250
             PP   PP    ++    P
Sbjct: 602 PPPPPPPPPILPNRSVPPPP 621


>04_03_0904 + 20717005-20718087
          Length = 360

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 25/104 (24%), Positives = 28/104 (26%)
 Frame = +2

Query: 746  TPTXPXFSPXXRPQXTXXRVXPXXXXLTXXI*TXXXXDPXXXXXPPFEXXXXTXXXFXPX 925
            TPT P + P  +P  T     P          T     P     P       T   + P 
Sbjct: 172  TPTPPSYKPQPKPTPTPYTPTP----------TPPSYKPQPKPTPTPYTPTPTPPSYKPQ 221

Query: 926  XPXNPPPGVXXGKKXXPPPXXXXXXXX*XXLPXXXKXXTXXPPP 1057
               NPPP      K  PPP            P      T  P P
Sbjct: 222  PKPNPPPTYKPQPKPNPPPTYKPAPPTYKPQPKPNPPPTYKPQP 265


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,002,341
Number of Sequences: 37544
Number of extensions: 183480
Number of successful extensions: 321
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 302
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3292969272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)