Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_C08
         (1004 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.51 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.5  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    24   8.2  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 0.51
 Identities = 15/35 (42%), Positives = 15/35 (42%)
 Frame = -1

Query: 1004 GGGGGXXXXXXXXXXGGGGXXXXPPXXXXGGGGGG 900
            G GGG          GGGG     P    GGGGGG
Sbjct: 201  GAGGGGSGGGAP---GGGGGSSGGPGPGGGGGGGG 232



 Score = 27.5 bits (58), Expect = 0.67
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +3

Query: 630 PXGGGXXKXXPPPPXXGGGGG 692
           P GGG     P P   GGGGG
Sbjct: 212 PGGGGGSSGGPGPGGGGGGGG 232



 Score = 27.5 bits (58), Expect = 0.67
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 958 GGGGXXXXPPXXXGGGGGG 902
           GGGG     P   GGGGGG
Sbjct: 213 GGGGGSSGGPGPGGGGGGG 231



 Score = 27.5 bits (58), Expect = 0.67
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = -2

Query: 958 GGGGXXXXPPXXXGGGGGG 902
           GGGG    P    GGGGGG
Sbjct: 214 GGGGSSGGPGPGGGGGGGG 232


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.5
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 905 PPPPPXXGGGXXXXPP 952
           PPPPP  GG     PP
Sbjct: 530 PPPPPPPGGAVLNIPP 545


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 23.8 bits (49), Expect = 8.2
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = -2

Query: 136 QVNLXYNFGPFPNGFWVKVK 77
           Q+N+ + FGP P+ F ++++
Sbjct: 273 QLNVSFPFGPVPDDFKLRIR 292


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,055
Number of Sequences: 2352
Number of extensions: 12860
Number of successful extensions: 78
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 110585631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)