Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_C06
(885 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 228 5e-60
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 228 5e-60
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 228 5e-60
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 228 5e-60
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 227 6e-60
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 227 6e-60
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 227 8e-60
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 227 8e-60
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 227 8e-60
Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z75546-7|CAA99895.1| 566|Caenorhabditis elegans Hypothetical pr... 29 4.4
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 228 bits (557), Expect = 5e-60
Identities = 112/152 (73%), Positives = 124/152 (81%), Gaps = 1/152 (0%)
Frame = +3
Query: 330 NKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMF 509
+KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVIISAPSADAPMF
Sbjct: 77 HKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMF 136
Query: 510 VVGVNLEAYD-PSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDG 686
VVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF I+EGLM DG
Sbjct: 137 VVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDG 196
Query: 687 PSGKLWRDGRGAQQNIIPASTGAAKAVGKVIP 782
PSGKLWRDGRGA QNIIPASTGAAKAVGKVIP
Sbjct: 197 PSGKLWRDGRGAGQNIIPASTGAAKAVGKVIP 228
Score = 98.3 bits (234), Expect = 6e-21
Identities = 44/63 (69%), Positives = 55/63 (87%), Gaps = 1/63 (1%)
Frame = +2
Query: 134 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 310
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 311 FLV 319
+L+
Sbjct: 66 YLL 68
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 787 LNGKLTGMAFRVPVANVS 840
LNGKLTGMAFRVP +VS
Sbjct: 230 LNGKLTGMAFRVPTPDVS 247
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 228 bits (557), Expect = 5e-60
Identities = 112/152 (73%), Positives = 124/152 (81%), Gaps = 1/152 (0%)
Frame = +3
Query: 330 NKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMF 509
+KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVIISAPSADAPMF
Sbjct: 77 HKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMF 136
Query: 510 VVGVNLEAYD-PSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDG 686
VVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF I+EGLM DG
Sbjct: 137 VVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDG 196
Query: 687 PSGKLWRDGRGAQQNIIPASTGAAKAVGKVIP 782
PSGKLWRDGRGA QNIIPASTGAAKAVGKVIP
Sbjct: 197 PSGKLWRDGRGAGQNIIPASTGAAKAVGKVIP 228
Score = 95.5 bits (227), Expect = 4e-20
Identities = 43/63 (68%), Positives = 54/63 (85%), Gaps = 1/63 (1%)
Frame = +2
Query: 134 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 310
+GINGFGRIGRLVLRA++EK + V A+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVDAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 311 FLV 319
+L+
Sbjct: 66 YLL 68
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 787 LNGKLTGMAFRVPVANVS 840
LNGKLTGMAFRVP +VS
Sbjct: 230 LNGKLTGMAFRVPTPDVS 247
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 228 bits (557), Expect = 5e-60
Identities = 112/152 (73%), Positives = 124/152 (81%), Gaps = 1/152 (0%)
Frame = +3
Query: 330 NKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMF 509
+KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVIISAPSADAPMF
Sbjct: 77 HKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMF 136
Query: 510 VVGVNLEAYD-PSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDG 686
VVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF I+EGLM DG
Sbjct: 137 VVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDG 196
Query: 687 PSGKLWRDGRGAQQNIIPASTGAAKAVGKVIP 782
PSGKLWRDGRGA QNIIPASTGAAKAVGKVIP
Sbjct: 197 PSGKLWRDGRGAGQNIIPASTGAAKAVGKVIP 228
Score = 98.3 bits (234), Expect = 6e-21
Identities = 44/63 (69%), Positives = 55/63 (87%), Gaps = 1/63 (1%)
Frame = +2
Query: 134 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 310
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 311 FLV 319
+L+
Sbjct: 66 YLL 68
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 787 LNGKLTGMAFRVPVANVS 840
LNGKLTGMAFRVP +VS
Sbjct: 230 LNGKLTGMAFRVPTPDVS 247
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 228 bits (557), Expect = 5e-60
Identities = 112/152 (73%), Positives = 124/152 (81%), Gaps = 1/152 (0%)
Frame = +3
Query: 330 NKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMF 509
+KI V++ RDP I WG +GA+YVVESTGVFTT +KA+AHL+GGAKKVIISAPSADAPMF
Sbjct: 77 HKIKVYNSRDPAEIQWGASGADYVVESTGVFTTIEKANAHLKGGAKKVIISAPSADAPMF 136
Query: 510 VVGVNLEAYD-PSFKVISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXXDG 686
VVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF I+EGLM DG
Sbjct: 137 VVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDG 196
Query: 687 PSGKLWRDGRGAQQNIIPASTGAAKAVGKVIP 782
PSGKLWRDGRGA QNIIPASTGAAKAVGKVIP
Sbjct: 197 PSGKLWRDGRGAGQNIIPASTGAAKAVGKVIP 228
Score = 98.3 bits (234), Expect = 6e-21
Identities = 44/63 (69%), Positives = 55/63 (87%), Gaps = 1/63 (1%)
Frame = +2
Query: 134 IGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQDG 310
+GINGFGRIGRLVLRA++EK + VVA+NDPFI +DYMVYLF+YDSTHGRFKG+V +
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDPFISIDYMVYLFQYDSTHGRFKGTVAHEGD 65
Query: 311 FLV 319
+L+
Sbjct: 66 YLL 68
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 787 LNGKLTGMAFRVPVANVS 840
LNGKLTGMAFRVP +VS
Sbjct: 230 LNGKLTGMAFRVPTPDVS 247
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 227 bits (556), Expect = 6e-60
Identities = 113/154 (73%), Positives = 124/154 (80%), Gaps = 1/154 (0%)
Frame = +3
Query: 324 NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAP 503
+ +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKKVIISAPSADAP
Sbjct: 75 SSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAP 134
Query: 504 MFVVGVNLEAYDPSFK-VISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXX 680
M+VVGVN E YD S VISNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 135 MYVVGVNHEKYDASNDHVISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTV 194
Query: 681 DGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIP 782
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP
Sbjct: 195 DGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIP 228
Score = 101 bits (242), Expect = 7e-22
Identities = 46/65 (70%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Frame = +2
Query: 128 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 304
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 305 DGFLV 319
FL+
Sbjct: 64 GDFLI 68
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 787 LNGKLTGMAFRVPVANVS 840
LNGKLTGMAFRVP +VS
Sbjct: 230 LNGKLTGMAFRVPTPDVS 247
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 227 bits (556), Expect = 6e-60
Identities = 113/154 (73%), Positives = 124/154 (80%), Gaps = 1/154 (0%)
Frame = +3
Query: 324 NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAP 503
+ +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKKVIISAPSADAP
Sbjct: 75 SSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAP 134
Query: 504 MFVVGVNLEAYDPSFK-VISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXX 680
M+VVGVN E YD S VISNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 135 MYVVGVNHEKYDASNDHVISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTV 194
Query: 681 DGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIP 782
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP
Sbjct: 195 DGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIP 228
Score = 101 bits (242), Expect = 7e-22
Identities = 46/65 (70%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Frame = +2
Query: 128 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 304
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 305 DGFLV 319
FL+
Sbjct: 64 GDFLI 68
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 787 LNGKLTGMAFRVPVANVS 840
LNGKLTGMAFRVP +VS
Sbjct: 230 LNGKLTGMAFRVPTPDVS 247
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 227 bits (555), Expect = 8e-60
Identities = 112/154 (72%), Positives = 124/154 (80%), Gaps = 1/154 (0%)
Frame = +3
Query: 324 NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAP 503
+ +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKKVIISAPSADAP
Sbjct: 75 SSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAP 134
Query: 504 MFVVGVNLEAYDPSFK-VISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXX 680
M+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 135 MYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTV 194
Query: 681 DGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIP 782
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP
Sbjct: 195 DGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIP 228
Score = 101 bits (242), Expect = 7e-22
Identities = 46/65 (70%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Frame = +2
Query: 128 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 304
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 305 DGFLV 319
FL+
Sbjct: 64 GDFLI 68
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 787 LNGKLTGMAFRVPVANVS 840
LNGKLTGMAFRVP +VS
Sbjct: 230 LNGKLTGMAFRVPTPDVS 247
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 227 bits (555), Expect = 8e-60
Identities = 112/154 (72%), Positives = 124/154 (80%), Gaps = 1/154 (0%)
Frame = +3
Query: 324 NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAP 503
+ +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKKVIISAPSADAP
Sbjct: 75 SSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAP 134
Query: 504 MFVVGVNLEAYDPSFK-VISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXX 680
M+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 135 MYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTV 194
Query: 681 DGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIP 782
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP
Sbjct: 195 DGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIP 228
Score = 101 bits (242), Expect = 7e-22
Identities = 46/65 (70%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Frame = +2
Query: 128 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 304
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 305 DGFLV 319
FL+
Sbjct: 64 GDFLI 68
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 787 LNGKLTGMAFRVPVANVS 840
LNGKLTGMAFRVP +VS
Sbjct: 230 LNGKLTGMAFRVPTPDVS 247
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 227 bits (555), Expect = 8e-60
Identities = 112/154 (72%), Positives = 124/154 (80%), Gaps = 1/154 (0%)
Frame = +3
Query: 324 NGNKIAVFSERDPKAIPWGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAP 503
+ +KI VF+ +DP AI WG A++VVESTGVFTT +KASAHL+GGAKKVIISAPSADAP
Sbjct: 75 SSHKIKVFNSKDPAAIAWGSVKADFVVESTGVFTTKEKASAHLQGGAKKVIISAPSADAP 134
Query: 504 MFVVGVNLEAYDPSFK-VISNASCTTNCLAPLAKVIHDNFEIVEGLMXXXXXXXXXXXXX 680
M+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DNF I+EGLM
Sbjct: 135 MYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTV 194
Query: 681 DGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIP 782
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP
Sbjct: 195 DGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIP 228
Score = 101 bits (242), Expect = 7e-22
Identities = 46/65 (70%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Frame = +2
Query: 128 SKIGINGFGRIGRLVLRASIEKGA-QVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEVQ 304
+ +GINGFGRIGRLVLRA++EK QVVA+NDPFI +DYMVYLFKYDSTHG+FKG+V
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTVTYD 63
Query: 305 DGFLV 319
FL+
Sbjct: 64 GDFLI 68
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 787 LNGKLTGMAFRVPVANVS 840
LNGKLTGMAFRVP +VS
Sbjct: 230 LNGKLTGMAFRVPTPDVS 247
>Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical
protein C38C6.2 protein.
Length = 647
Score = 29.9 bits (64), Expect = 2.5
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 139 NQWIWPHWPFGAP 177
N+ +WPHW FG+P
Sbjct: 426 NEQVWPHWRFGSP 438
>Z75546-7|CAA99895.1| 566|Caenorhabditis elegans Hypothetical
protein R05D11.8 protein.
Length = 566
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -2
Query: 473 NFFSTSLQVSRCFICSGKDTSRLYNIFSPSFSPRNGLRVPF*ENSNFVTINKQ 315
N L + RCF S D SRL I + S + +P +SN ++NKQ
Sbjct: 38 NVIKNGLPLHRCFTLSSSDISRLKVIRGATQSTQKSQPLPVQNSSN--SVNKQ 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,792,967
Number of Sequences: 27780
Number of extensions: 460978
Number of successful extensions: 1068
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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