Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_C01
(897 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 421 e-120
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 409 e-116
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 303 1e-84
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 270 1e-74
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 35 0.001
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.6
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 3.8
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 5.0
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 22 8.7
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 421 bits (1038), Expect = e-120
Identities = 203/241 (84%), Positives = 213/241 (88%), Gaps = 2/241 (0%)
Frame = +1
Query: 115 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 294
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 295 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 474
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 475 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRLRKSRRKYPHTSRR 654
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE R + +++ ++
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKK 180
Query: 655 LA-TXSCCRFVPISGWHGDNMLEPSTKMPWFKGWQVXRKKAX*R-KCLIEALDAILATGR 828
+ + FVPISGWHGDNMLE S+KMPWFKGW V RK+ KCLIEALDAIL R
Sbjct: 181 IGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTR 240
Query: 829 P 831
P
Sbjct: 241 P 241
Score = 26.2 bits (55), Expect = 0.41
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +3
Query: 828 PTDXPLXXPXKX-FQIGGFGTVP 893
PTD L P + ++IGG GTVP
Sbjct: 241 PTDKALRLPLQDVYKIGGIGTVP 263
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 409 bits (1008), Expect = e-116
Identities = 197/241 (81%), Positives = 209/241 (86%), Gaps = 2/241 (0%)
Frame = +1
Query: 115 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 294
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 295 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 474
DKLKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 475 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRLRKSRRKYPHTSRR 654
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD T+PPYSE R + +++ ++
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKK 180
Query: 655 LA-TXSCCRFVPISGWHGDNMLEPSTKMPWFKGWQVXRKKA-X*RKCLIEALDAILATGR 828
+ + FVPISGWHGDNMLEPS K PW+KGW+V RK K LIEALDAIL R
Sbjct: 181 IGYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALDAILPPSR 240
Query: 829 P 831
P
Sbjct: 241 P 241
Score = 36.3 bits (80), Expect = 4e-04
Identities = 36/103 (34%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Frame = +3
Query: 606 AQIEEIKKEVSSYIKKIGYX--QLLSLRAHFW----MARRQHVGAFNQNALVQGMAGGX* 767
A+ EEIKKEVSSYIKKIGY + + W M + + V+ G
Sbjct: 165 ARFEEIKKEVSSYIKKIGYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNAD 224
Query: 768 ESXLTEMPH*SSRCHPGHWPPTDXPLXXPXKX-FQIGGFGTVP 893
L E + P PTD L P + ++IGG GTVP
Sbjct: 225 GKTLIEAL--DAILPPSR--PTDKALRLPLQDVYKIGGIGTVP 263
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 303 bits (744), Expect = 1e-84
Identities = 147/184 (79%), Positives = 157/184 (85%), Gaps = 2/184 (1%)
Frame = +1
Query: 286 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 465
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 466 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRLRKSRRKYPHT 645
AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE R + +++
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 120
Query: 646 SRRLA-TXSCCRFVPISGWHGDNMLEPSTKMPWFKGWQVXRKKAX*R-KCLIEALDAILA 819
+++ + FVPISGWHGDNMLE S+KMPWFKGW V RK+ KCLIEALDAIL
Sbjct: 121 IKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILP 180
Query: 820 TGRP 831
RP
Sbjct: 181 PTRP 184
Score = 26.2 bits (55), Expect = 0.41
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +3
Query: 828 PTDXPLXXPXKX-FQIGGFGTVP 893
PTD L P + ++IGG GTVP
Sbjct: 184 PTDKALRLPLQDVYKIGGIGTVP 206
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 270 bits (662), Expect = 1e-74
Identities = 131/168 (77%), Positives = 141/168 (83%), Gaps = 2/168 (1%)
Frame = +1
Query: 334 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 513
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 514 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRLRKSRRKYPHTSRRLA-TXSCCRFVPI 690
REHALLAFTLGVKQLIVGVNKMDSTEPPYSE R + +++ +++ + FVPI
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 120
Query: 691 SGWHGDNMLEPSTKMPWFKGWQVXRKKAX*R-KCLIEALDAILATGRP 831
SGWHGDNMLE S+KMPWFKGW V RK+ KCLIEALDAIL RP
Sbjct: 121 SGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRP 168
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 34.7 bits (76), Expect = 0.001
Identities = 26/70 (37%), Positives = 33/70 (47%)
Frame = +1
Query: 373 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 552
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 553 QLIVGVNKMD 582
+IV +NK+D
Sbjct: 247 PIIVAINKID 256
Score = 25.4 bits (53), Expect = 0.71
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 127 KTHINIVVIGHVDSGKST 180
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.6
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 136 INIVVIGHVDSGKST 180
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 3.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 358 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 459
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 5.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 358 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 459
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 21.8 bits (44), Expect = 8.7
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 691 SGWHGDNMLEPSTKMPWFKGWQVXRKK 771
S W+ + +L P+ W++ Q KK
Sbjct: 24 SNWNWNTLLRPNFLDGWYQTLQTHMKK 50
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 247,407
Number of Sequences: 438
Number of extensions: 5163
Number of successful extensions: 32
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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