Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_B23
(1001 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 41 2e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 37 0.005
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.012
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.083
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.11
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.15
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.19
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 1.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.8
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 23 5.5
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 27 5.5
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 5.5
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 7.2
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 22 8.4
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 41.1 bits (92), Expect = 2e-04
Identities = 22/53 (41%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +1
Query: 844 PXPPRXPXXXLPXPXXXRAPPP-PLXGXXXPXRPXLRXXGAXRPXPXPPPPPA 999
P PP P P PPP P+ G P P GA P P PPPPPA
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAG-PPPPPPPPPA 784
Score = 28.3 bits (60), Expect = 1.8
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +1
Query: 400 SPXXPXPACXXP-XXXXPXXXGAPGXXXGXXPPXPXRGPPXPRPXGXXPGPP 552
SP P PA P P P G PP P PP G P PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP--PPGVAGAGPPPPPP 780
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 573 PXXGGTPXAXPPXGXXPXGPP 635
P GG P PP G GPP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPP 776
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 664 PPXPXXPXPXXGAXXPTPPXP 726
PP P P GA P PP P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPP 781
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 36.7 bits (81), Expect = 0.005
Identities = 26/80 (32%), Positives = 26/80 (32%)
Frame = -3
Query: 606 GGGPXGCPRXXGXXAPAPGGXGAXXXXPGXGGPPGXGXGGXAXXPARCPGXXGXPXXXXX 427
GGG G G P PGG G G G G G GG P G G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHG-GHGGFGGGPGGFEGGPGGFGGGPG 245
Query: 426 AGRGGXXRAGXGRXXXGSGP 367
GG G G G GP
Sbjct: 246 GFGGGLGGFGGGPGGFGGGP 265
Score = 31.1 bits (67), Expect = 0.25
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = -1
Query: 941 GRXGXXXPXKGGGGARXXWGXGRXXXGXRGGXGXGPGGAXPG 816
G G P GG G +G G GG G GPGG G
Sbjct: 195 GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG 236
Score = 31.1 bits (67), Expect = 0.25
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -3
Query: 915 QGGXGRXGGXGGGKXXXGGAGGXXAGXGGXXPGAG 811
+GG G GG GG GG GG G GG G G
Sbjct: 234 EGGPGGFGGGPGG--FGGGLGGFGGGPGGFGGGPG 266
Score = 28.7 bits (61), Expect = 1.4
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -3
Query: 633 GAPXGXXXKGGGPXGCPRXXGXXAPAPGGXGAXXXXPGXGGPPG 502
G P G GGGP G G PGG G PG G PG
Sbjct: 235 GGPGGF---GGGPGGFGGGLGGFGGGPGGFGG---GPGGHGGPG 272
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/34 (47%), Positives = 16/34 (47%)
Frame = -3
Query: 912 GGXGRXGGXGGGKXXXGGAGGXXAGXGGXXPGAG 811
G G GG GGG GG GG G GG G G
Sbjct: 239 GFGGGPGGFGGG---LGGFGGGPGGFGGGPGGHG 269
Score = 27.5 bits (58), Expect = 3.1
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Frame = -1
Query: 551 GGPGXXPXGRG--XGGPRXGXGGXXPXXXPGAPXXXGXXXXGXXQAGXGXXGLGGG 390
GG G G G GGP GG P G P G G G G G GGG
Sbjct: 214 GGEGHHHGGHGGFGGGPGGFEGG--PGGFGGGPGGFGGGLGGF---GGGPGGFGGG 264
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 912 GGXGRXGGXGGGKXXXGGAGGXXAGXG 832
G G GG GGG GG G G G
Sbjct: 246 GFGGGLGGFGGGPGGFGGGPGGHGGPG 272
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.5 bits (78), Expect = 0.012
Identities = 21/60 (35%), Positives = 21/60 (35%)
Frame = +1
Query: 820 GXAPPGPXPXPPRXPXXXLPXPXXXRAPPPPLXGXXXPXRPXLRXXGAXRPXPXPPPPPA 999
G AP P PP P P PPPP P P A P PPP PA
Sbjct: 1680 GMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPP--PSAPPMPAGPPSAPPPPLPA 1737
Score = 28.3 bits (60), Expect = 1.8
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +1
Query: 829 PPGPXPXPPRXPXXXLPXPXXXRAPPPPLXGXXXPXRP 942
PP P PP P P APPPPL P P
Sbjct: 1710 PPMSVPPPPSAPPMPAGPPS---APPPPLPASSAPSVP 1744
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +3
Query: 804 QXXPPRGRXPRXXPXAPPXPPTXPSXPPXXPXAPXP 911
Q P P PP P P+ PP P P P
Sbjct: 1701 QMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.7 bits (71), Expect = 0.083
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 831 PRXXPXAPPXPPTXPSXPPXXPXAPXP 911
P P APP P P+ PP P AP P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 31.5 bits (68), Expect = 0.19
Identities = 15/53 (28%), Positives = 18/53 (33%)
Frame = +1
Query: 838 PXPXPPRXPXXXLPXPXXXRAPPPPLXGXXXPXRPXLRXXGAXRPXPXPPPPP 996
P P P R PPPP +P + + P PPPPP
Sbjct: 291 PLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 31.5 bits (68), Expect = 0.19
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 831 PRXXPXAPPXPPTXPSXPPXXPXAP 905
P P APP PP P+ PP AP
Sbjct: 460 PAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 29.9 bits (64), Expect = 0.59
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 4/57 (7%)
Frame = +1
Query: 832 PGPXPXPPRXPXXXLPXPXXXRAPPPPLXGXXXPXR----PXLRXXGAXRPXPXPPP 990
P P P P +P P R+ PPP P P L A P PPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 29.5 bits (63), Expect = 0.78
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = +1
Query: 817 PGXAPPGPXPXPPRXPXXXLPXPXXXRAPPPPLXGXXXPXRPXLRXXGAXRPXPXPPPP 993
P AP PP + P APPP + G P P L P P PP
Sbjct: 366 PRSAPSTGRQPPPLSSSRAVSNPP---APPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421
Score = 29.1 bits (62), Expect = 1.0
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +1
Query: 817 PGXAPPGPXPXPPRXPXXXLPXPXXXRAPPPPLXGXXXPXRPXLRXXGAXRPXPXPPPPP 996
P PP P P LP APP P P P P P PPP
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPM-GAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Query: 997 A 999
A
Sbjct: 479 A 479
Score = 28.7 bits (61), Expect = 1.4
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 831 PRXXPXAPPXPPTXPSXPPXXPXAP 905
P P APP PP+ P PP P
Sbjct: 440 PMGAPAAPPLPPSAPIAPPLPAGMP 464
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Frame = +3
Query: 813 PPRGRXPRXXPXAPPXPPTX-PSXPPXXPXAPXP 911
PP G R P PP+ PS PP P + P
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +3
Query: 816 PRGRXPRXXPXAPPXPPTX-PSXPPXXPXAP 905
P P P APP P P+ PP P AP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 26.6 bits (56), Expect = 5.5
Identities = 17/61 (27%), Positives = 17/61 (27%)
Frame = +1
Query: 817 PGXAPPGPXPXPPRXPXXXLPXPXXXRAPPPPLXGXXXPXRPXLRXXGAXRPXPXPPPPP 996
P P P P P P APP P P P P P P P
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPV 488
Query: 997 A 999
A
Sbjct: 489 A 489
Score = 26.2 bits (55), Expect = 7.2
Identities = 19/73 (26%), Positives = 24/73 (32%), Gaps = 12/73 (16%)
Frame = +1
Query: 817 PGXAPPGPXPXPP------RXPXXXLPXPXXXRAPPPPLXGXXXPXRPX------LRXXG 960
P + P P P PP P P P + P + P P
Sbjct: 246 PSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALA 305
Query: 961 AXRPXPXPPPPPA 999
A + P PPPPP+
Sbjct: 306 ANKKRPPPPPPPS 318
Score = 25.8 bits (54), Expect = 9.6
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1
Query: 907 PPLXGXXXPXRPXLRXXGAXRPXPXPPPPPA 999
PP+ RP R P P P PPP+
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPS 260
Score = 25.8 bits (54), Expect = 9.6
Identities = 14/53 (26%), Positives = 15/53 (28%)
Frame = +1
Query: 838 PXPXPPRXPXXXLPXPXXXRAPPPPLXGXXXPXRPXLRXXGAXRPXPXPPPPP 996
P P PP P P P P+ P P P P PP
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 32.3 bits (70), Expect = 0.11
Identities = 18/37 (48%), Positives = 18/37 (48%)
Frame = -2
Query: 904 GAXGXXGGXEGXVGGXGGAXGXXRGXRPRGGXXWGGG 794
G G GG G GG GGA G RG RGG GG
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGGGRGG-ARGGRGGRGG 52
Score = 29.9 bits (64), Expect = 0.59
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -2
Query: 913 RGXGAXGXXGGXEGXVGGXGGAXGXXRGXRPRGGXXWGG 797
RG G GG G GG GGA G G G GG
Sbjct: 32 RGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 28.3 bits (60), Expect = 1.8
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = -1
Query: 947 RXGRXGXXXPXKGGGGARXXWGXGRXXX--GXRGGXGXGPGGAXPGR 813
R GR G G G R +G GR G RGG G GG R
Sbjct: 8 RGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGAR 54
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -3
Query: 912 GGXGRXGGXGGGK-XXXGGAGGXXAGXGGXXPG 817
G G GG GG+ GG GG G GG G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGG 38
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = -3
Query: 912 GGXGRXGGXGGGKXXXGG--AGGXXAGXGGXXPGAG 811
G G GG GG+ GG G G GG G G
Sbjct: 13 GSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRG 48
Score = 26.2 bits (55), Expect = 7.2
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = -1
Query: 947 RXGRXGXXXPXKG-GGGARXXWGXGRXXX-GXRGGXGXGPGG 828
R GR G G GGG G GR G RGG G GG
Sbjct: 15 RGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGG 56
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.9 bits (69), Expect = 0.15
Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Frame = +1
Query: 814 RPGXAPPGPXPXPPRXPXXXLPXPXXXRAPPPPLXG-XXXPXRPXLRXXGAXRPXPXPPP 990
RP PP P PP P P P P P P P L P PPP
Sbjct: 146 RPSIPPPSPASAPP-IPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Query: 991 P 993
P
Sbjct: 205 P 205
Score = 30.3 bits (65), Expect = 0.45
Identities = 17/57 (29%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +1
Query: 391 PPPSPXXPXPACXX-PXXXXPXXXGAPGXXXGXXPPXPXRGPPXPR--PXGXXPGPP 552
PP +P P P P P P PP P + PP P P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 28.7 bits (61), Expect = 1.4
Identities = 23/63 (36%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Frame = +1
Query: 817 PGXAPPGPXPXPPRXPXXXLPXPXXXRAPPPP--LXGXXXPXRPXLRXXGAXR-PXPXPP 987
P APP P PP P P P +APP P L P P A P PP
Sbjct: 140 PTSAPPRPS-IPPPSPASAPPIP--SKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
Query: 988 PPP 996
PP
Sbjct: 197 MPP 199
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 493 PXPXRGPPXPRPXGXXPGPPXXXG 564
P P PP P P P PP G
Sbjct: 3 PAPPPPPPAPAPAAAAPAPPLMTG 26
Score = 25.0 bits (52), Expect(2) = 1.6
Identities = 12/34 (35%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Frame = +1
Query: 817 PGXAPPGPXPXPPRXP-XXXLPXPXXXRAPPPPL 915
P P P PP P P + PPPPL
Sbjct: 173 PPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPL 206
Score = 21.8 bits (44), Expect(2) = 1.6
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = +1
Query: 658 SXPPXPXXPXPXXGAXXPTP 717
S PP P P P + P P
Sbjct: 142 SAPPRPSIPPPSPASAPPIP 161
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.19
Identities = 21/59 (35%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Frame = +1
Query: 385 GXPP-PSPXXPXPACXXPXXXXPXXXGAPGXXXGXXP-PXPXRGPPXPRP-XGXXPGPP 552
G PP P P P P P P G P P P PP P+P G P PP
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPP---VPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Score = 29.5 bits (63), Expect = 0.78
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 5/58 (8%)
Frame = +1
Query: 391 PPPS--PXXPXPACXXPXXXXPXXXGAPGXXXGXXPPXP---XRGPPXPRPXGXXPGP 549
P PS P P P+ P P P PP P PP P P G P P
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 29.1 bits (62), Expect = 1.0
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 5/59 (8%)
Frame = +1
Query: 391 PPPS---PXXPXPACXXPXXXXPXXXG-APGXXXGXXP-PXPXRGPPXPRPXGXXPGPP 552
P PS P P PA P P P G P P P PP P P P P
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 28.7 bits (61), Expect = 1.4
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +1
Query: 817 PGXAPPGPXPXPPRXPXXXLPXPXXXRAPPPPLXGXXXPXRPXLRXXGAXRPXPXPPPP 993
P PP P P+ P P APP P P P P P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 26.6 bits (56), Expect = 5.5
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Frame = +1
Query: 391 PPPSPXXPXPACXXPXXXXPXXXG-APGXXXGXXP-PXPXRG-PPXPRP-XGXXPGPP 552
P +P P P+ P P P P P P G PP P+P G P PP
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 26.2 bits (55), Expect = 7.2
Identities = 23/65 (35%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Frame = +1
Query: 817 PGXAPPGPXPXPPRXPXXXLPXPXXXRAPPPPLXGXXXPXRPXLRXXGAXRPXPXP---- 984
P AP G P P + P P APP P P P GA P P P
Sbjct: 1113 PVPAPSGAPPVP-KPSVAAPPVPVPSGAPPVPKPSVAAP--PVPAPSGAP-PVPKPSVAA 1168
Query: 985 PPPPA 999
PP PA
Sbjct: 1169 PPVPA 1173
Score = 25.8 bits (54), Expect = 9.6
Identities = 19/63 (30%), Positives = 21/63 (33%), Gaps = 5/63 (7%)
Frame = +1
Query: 391 PPPS---PXXPXPACXXPXXXXPXXXG-APGXXXGXXP-PXPXRGPPXPRPXGXXPGPPX 555
P PS P P P+ P P P P P P PP P+P P P
Sbjct: 1095 PKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPA 1154
Query: 556 XXG 564
G
Sbjct: 1155 PSG 1157
Score = 25.8 bits (54), Expect = 9.6
Identities = 16/56 (28%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = +1
Query: 391 PPPSPXXPXPACXXPXXXXPXXXG-APGXXXGXXP-PXPXRGPPXPRPXGXXPGPP 552
P +P P P+ P P P P P P PP P+P P P
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.1 bits (62), Expect = 1.0
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 915 QGGXGRXGGXGGGKXXXGGAGGXXAGXGGXXPG 817
+GG G GG GG G GG G GG G
Sbjct: 450 RGGRGGFGGRGGFGGRGGFGGGRGRGRGGARSG 482
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -1
Query: 914 KGGGGARXXWGXGRXXXGXRGGXGXGPGGAXPG 816
+GG G R +G GR G GG G G GGA G
Sbjct: 453 RGGFGGRGGFG-GRGGFG--GGRGRGRGGARSG 482
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.8
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +1
Query: 904 PPPLXGXXXPXRPXLRXXGAXRPXPXPPPPPA 999
PPP P P P PPPPPA
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPPA 198
Score = 23.0 bits (47), Expect(2) = 8.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 970 PXPXPPPPP 996
P P PPPPP
Sbjct: 234 PLPAPPPPP 242
Score = 23.0 bits (47), Expect(2) = 3.0
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 970 PXPXPPPPP 996
P P PPPPP
Sbjct: 236 PAPPPPPPP 244
Score = 22.6 bits (46), Expect(2) = 3.0
Identities = 10/28 (35%), Positives = 10/28 (35%)
Frame = +1
Query: 829 PPGPXPXPPRXPXXXLPXPXXXRAPPPP 912
PP P P LP PPPP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPPPPP 195
Score = 21.0 bits (42), Expect(2) = 8.3
Identities = 9/27 (33%), Positives = 9/27 (33%)
Frame = +1
Query: 832 PGPXPXPPRXPXXXLPXPXXXRAPPPP 912
P P PP P PPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPP 193
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 23.4 bits (48), Expect(2) = 5.5
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 970 PXPXPPPPPA 999
P P PPPPP+
Sbjct: 306 PPPPPPPPPS 315
Score = 21.4 bits (43), Expect(2) = 5.5
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 958 GAXRPXPXPPPP 993
G P P PPPP
Sbjct: 303 GGLPPPPPPPPP 314
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 26.6 bits (56), Expect = 5.5
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 912 GGXGRXGGXGGGKXXXGGAGGXXAGXGGXXP 820
GG G G G G GGA AG G P
Sbjct: 229 GGAGLGGLGGAGLGGFGGANNATAGIAGAAP 259
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.6 bits (56), Expect = 5.5
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Frame = -1
Query: 941 GRXGXXXPXKGGGGARXXWG---XGRXXXGXRGGXGXGPGGAXPG 816
GR G G GG+R +G G G RGG G G G G
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRG 180
Score = 26.6 bits (56), Expect = 5.5
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -3
Query: 915 QGGXGRXGGXGGGKXXXGGAGGXXAGXGGXXPG 817
+GG G G GG G GG G GG G
Sbjct: 144 RGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRG 176
Score = 26.6 bits (56), Expect = 5.5
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -1
Query: 950 RRXGRXGXXXPXKGG--GGARXXWGXGRXXXGXRGGXGXGPGGAXPGR 813
R R G +GG GG+R +G G G RGG G G GR
Sbjct: 147 RGGSRGGFGGNSRGGFGGGSRGGFGGGSRG-GSRGGFRGGSRGGFRGR 193
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 829 PPGPXPXPPRXPXXXLPXPXXXRAPPPP 912
PPG P PP P P PPPP
Sbjct: 5 PPGNPPPPP--PPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 9.6
Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Frame = +3
Query: 843 PXAPPXPPTXPSX-PPXXPXAPXP 911
P PP PP P PP P P P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 22.2 bits (45), Expect(2) = 8.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 976 PXPPPPPA 999
P PPPPPA
Sbjct: 1096 PPPPPPPA 1103
Score = 21.8 bits (44), Expect(2) = 8.4
Identities = 8/22 (36%), Positives = 8/22 (36%)
Frame = +1
Query: 931 PXRPXLRXXGAXRPXPXPPPPP 996
P P P PPPPP
Sbjct: 1080 PSAPVANNVSKPSAVPPPPPPP 1101
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.152 0.558
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,531,300
Number of Sequences: 5004
Number of extensions: 19253
Number of successful extensions: 219
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 519268360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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