Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_B21
         (828 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            32   0.025
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.53 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    27   0.93 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.6  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   3.8  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   8.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 31.9 bits (69), Expect = 0.025
 Identities = 17/49 (34%), Positives = 17/49 (34%)
 Frame = +1

Query: 586 GXPXFXKKXXGGXXPPXXXXXPPPPPKXGGAXXXXPXGGXPPXPXPXGF 732
           G P           PP     PPP P  GG     P G  PP P   GF
Sbjct: 572 GFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGG-PAGSRPPLPNLLGF 619



 Score = 27.9 bits (59), Expect = 0.40
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +1

Query: 649 PPPPPKXGGAXXXXPXGGXPP 711
           PPPPP  GGA    P    PP
Sbjct: 530 PPPPPPPGGAVLNIPPQFLPP 550



 Score = 26.6 bits (56), Expect = 0.93
 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
 Frame = -1

Query: 591 PPPPXGXPP-PXGGGXFXXXXGKK 523
           PPPP G PP P  GG      G +
Sbjct: 587 PPPPMGPPPSPLAGGPLGGPAGSR 610


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.5 bits (58), Expect = 0.53
 Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
 Frame = +1

Query: 550 PPPXXGXXPXXGGXPXFXKKXXG--GXXPPXXXXXPPPP-PKXGGAXXXXPXGGXP 708
           PPP     P  G  P    +     G  P      P PP P  GGA    P G  P
Sbjct: 263 PPPIRPPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAPGGPPQGMRP 318


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 26.6 bits (56), Expect = 0.93
 Identities = 12/35 (34%), Positives = 12/35 (34%)
 Frame = +1

Query: 553 PPXXGXXPXXGGXPXFXKKXXGGXXPPXXXXXPPP 657
           PP  G  P   G P       G   PP     PPP
Sbjct: 86  PPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPP 120


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +3

Query: 651 PPPPQXXGXXXXXPXGGXXPXPPXPG 728
           P PP         P  G  P PP PG
Sbjct: 599 PQPPAGSSLNLSHPSAGMVPQPPPPG 624



 Score = 25.0 bits (52), Expect = 2.8
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -2

Query: 722 GXGXGGXPPXGXXXXAPPXLGGGGG 648
           G   GG P  G      P  GGGGG
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGGGG 229



 Score = 23.4 bits (48), Expect = 8.7
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +2

Query: 563 GGGXPXGGGGPXFXKKXXGG 622
           GGG P GGGG        GG
Sbjct: 208 GGGAPGGGGGSSGGPGPGGG 227


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = -2

Query: 722 GXGXGGXPPXGXXXXAPPXLGGGGGXXXXXGG 627
           G G GG    G        LGGGGG      G
Sbjct: 657 GGGGGGGGSVGSGGIGSSSLGGGGGSGRSSSG 688


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 12/32 (37%), Positives = 12/32 (37%)
 Frame = -2

Query: 722 GXGXGGXPPXGXXXXAPPXLGGGGGXXXXXGG 627
           G G  G P  G    A     GGGG     GG
Sbjct: 840 GGGGAGGPLRGSSGGAGGGSSGGGGSGGTSGG 871


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 677,714
Number of Sequences: 2352
Number of extensions: 13264
Number of successful extensions: 39
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)