Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_B20
(937 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.073
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.073
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.22
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.22
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.22
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 33 0.39
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 33 0.39
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.51
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 32 0.51
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 0.70
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 31 0.90
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 2.1
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 2.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.7
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 3.6
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 4.8
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 4.8
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 4.8
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 4.8
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 6.3
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 6.3
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 6.3
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 6.3
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 6.3
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 6.3
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical pr... 28 8.3
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 28 8.3
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 28 8.3
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 28 8.3
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.1 bits (77), Expect = 0.073
Identities = 26/103 (25%), Positives = 30/103 (29%)
Frame = +3
Query: 369 PKPXKGPXXGVFPXXPPPXKTXQKXPPPXXGXKPHXXLXKSRXFPXXXXXXXXXXXXXXX 548
P+P P G++P PPP PP G P SR P
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP--PPSRFGPPGMGGMPPPPPPGMR 342
Query: 549 XXXXXXXXFLPXGXXGGAXXXXTPPPXKXXAPXXGXGGXSXPP 677
P G PPP + AP G G PP
Sbjct: 343 YPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Frame = +1
Query: 568 PXFSPXGXXGGPXXXX--PPPPXXXRPXPXXXGXXPXPQKXGGXXFXXXPPP 717
P P G GP PPPP R P G P P G PPP
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 350
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = +2
Query: 179 TXXPXGXGGXXLGXPPXPPPXXPXPXAXGXGXGXXPPXXGXXGXPXKXGKTP 334
T P + PP PPP P G PP G P G P
Sbjct: 284 TPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP 335
Score = 28.3 bits (60), Expect = 8.3
Identities = 30/125 (24%), Positives = 35/125 (28%)
Frame = +1
Query: 415 PPPXKPXKXXPPXXXGXNPTGXXKNPGXSPXKXPLGXXXXXXXXXXRKNXXPXFSPXGXX 594
P P + PP G P PG +P P G + F P G
Sbjct: 279 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG--PPGMPGMPPPPPPSR-----FGPPGMG 331
Query: 595 GGPXXXXPPPPXXXRPXPXXXGXXPXPQKXGGXXFXXXPPPXKXXXXPXXXXXPKKXXLX 774
G PPPP P P P+ PPP P P +
Sbjct: 332 G-----MPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP-----PSGHGMI 381
Query: 775 XGPPP 789
PPP
Sbjct: 382 PPPPP 386
Score = 24.6 bits (51), Expect(2) = 3.4
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +3
Query: 585 GXXGGAXXXXTPPPXKXXAPXXGXGGXSXPPKAXGXXXXXXPPP 716
G G PPP + P G GG PP PPP
Sbjct: 309 GPPGMPGMPPPPPPSRFGPP--GMGGMPPPPPPGMRYPGGMPPP 350
Score = 23.4 bits (48), Expect(2) = 3.4
Identities = 13/36 (36%), Positives = 14/36 (38%), Gaps = 4/36 (11%)
Frame = +3
Query: 375 PXKGPXXGVFPXXPP----PXKTXQKXPPPXXGXKP 470
P P V P PP P T + PPP G P
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWP 297
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.1 bits (77), Expect = 0.073
Identities = 26/103 (25%), Positives = 30/103 (29%)
Frame = +3
Query: 369 PKPXKGPXXGVFPXXPPPXKTXQKXPPPXXGXKPHXXLXKSRXFPXXXXXXXXXXXXXXX 548
P+P P G++P PPP PP G P SR P
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPP--PPSRFGPPGMGGMPPPPPPGMR 352
Query: 549 XXXXXXXXFLPXGXXGGAXXXXTPPPXKXXAPXXGXGGXSXPP 677
P G PPP + AP G G PP
Sbjct: 353 YPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Frame = +1
Query: 568 PXFSPXGXXGGPXXXX--PPPPXXXRPXPXXXGXXPXPQKXGGXXFXXXPPP 717
P P G GP PPPP R P G P P G PPP
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPP 360
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/52 (28%), Positives = 16/52 (30%)
Frame = +2
Query: 179 TXXPXGXGGXXLGXPPXPPPXXPXPXAXGXGXGXXPPXXGXXGXPXKXGKTP 334
T P + PP PPP P G PP G P G P
Sbjct: 294 TPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP 345
Score = 28.3 bits (60), Expect = 8.3
Identities = 30/125 (24%), Positives = 35/125 (28%)
Frame = +1
Query: 415 PPPXKPXKXXPPXXXGXNPTGXXKNPGXSPXKXPLGXXXXXXXXXXRKNXXPXFSPXGXX 594
P P + PP G P PG +P P G + F P G
Sbjct: 289 PTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG--PPGMPGMPPPPPPSR-----FGPPGMG 341
Query: 595 GGPXXXXPPPPXXXRPXPXXXGXXPXPQKXGGXXFXXXPPPXKXXXXPXXXXXPKKXXLX 774
G PPPP P P P+ PPP P P +
Sbjct: 342 G-----MPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP-----PSGHGMI 391
Query: 775 XGPPP 789
PPP
Sbjct: 392 PPPPP 396
Score = 24.6 bits (51), Expect(2) = 3.3
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +3
Query: 585 GXXGGAXXXXTPPPXKXXAPXXGXGGXSXPPKAXGXXXXXXPPP 716
G G PPP + P G GG PP PPP
Sbjct: 319 GPPGMPGMPPPPPPSRFGPP--GMGGMPPPPPPGMRYPGGMPPP 360
Score = 23.4 bits (48), Expect(2) = 3.3
Identities = 13/36 (36%), Positives = 14/36 (38%), Gaps = 4/36 (11%)
Frame = +3
Query: 375 PXKGPXXGVFPXXPP----PXKTXQKXPPPXXGXKP 470
P P V P PP P T + PPP G P
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWP 307
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.22
Identities = 19/69 (27%), Positives = 22/69 (31%), Gaps = 3/69 (4%)
Frame = +1
Query: 601 PXXXXPPPPXXXRPXPXXXGXXPXPQKXGGXXFXXXP---PPXKXXXXPXXXXXPKKXXL 771
P PPPP P P G P P + G P PP P P
Sbjct: 267 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT 326
Query: 772 XXGPPPXKK 798
PPP ++
Sbjct: 327 GSPPPPPRQ 335
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +2
Query: 215 GXPPXPPPXXPXPXAXGXGXGXXPPXXGXXGXPXKXGKTP 334
G PP PPP P G G PP G P + G P
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSP-PPPRTGSPP 273
Score = 31.1 bits (67), Expect = 1.2
Identities = 33/136 (24%), Positives = 36/136 (26%), Gaps = 2/136 (1%)
Frame = +1
Query: 415 PPPXKPXKXXPPXXXGXNPTGXXKNPGXSPXKXPLGXXXXXXXXXXRKNXXPXFSPXGXX 594
PPP P K PP +P SP G P G
Sbjct: 237 PPPPPPPKGSPPLAGSGSP--PPPPAAGSPPPPRTGSPPPPP-----TGSPPPPPAGGSP 289
Query: 595 GGPXXXXPPPPXXXRPXPXXXGXXPXPQKXGG--XXFXXXPPPXKXXXXPXXXXXPKKXX 768
P PPPP R P G P PQ G PPP P
Sbjct: 290 PPPRAGSPPPPPPPRGSP-PTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 348
Query: 769 LXXGPPPXKKXXKXXP 816
G PP + + P
Sbjct: 349 PPTGSPPTGRPPRGGP 364
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 4/61 (6%)
Frame = +3
Query: 618 PPPXKXXAPXXGXGGXSXPPKAXG----XXXXXXPPPX*XPXXXXXXXXPKKKXAXXXPP 785
PPP K P G G PP A PPP P P A PP
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 786 P 788
P
Sbjct: 300 P 300
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/78 (25%), Positives = 22/78 (28%), Gaps = 1/78 (1%)
Frame = +1
Query: 586 GXXGGPXXXXPPPPXXXRPXPXXXG-XXPXPQKXGGXXFXXXPPPXKXXXXPXXXXXPKK 762
G P PPPP + P G P P G PPP P P
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAG----SPPPPRTGSPPPPPTGSPPP 282
Query: 763 XXLXXGPPPXKKXXKXXP 816
PPP + P
Sbjct: 283 PPAGGSPPPPRAGSPPPP 300
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.22
Identities = 19/69 (27%), Positives = 22/69 (31%), Gaps = 3/69 (4%)
Frame = +1
Query: 601 PXXXXPPPPXXXRPXPXXXGXXPXPQKXGGXXFXXXP---PPXKXXXXPXXXXXPKKXXL 771
P PPPP P P G P P + G P PP P P
Sbjct: 288 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT 347
Query: 772 XXGPPPXKK 798
PPP ++
Sbjct: 348 GSPPPPPRQ 356
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +2
Query: 215 GXPPXPPPXXPXPXAXGXGXGXXPPXXGXXGXPXKXGKTP 334
G PP PPP P G G PP G P + G P
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSP-PPPRTGSPP 294
Score = 31.1 bits (67), Expect = 1.2
Identities = 33/136 (24%), Positives = 36/136 (26%), Gaps = 2/136 (1%)
Frame = +1
Query: 415 PPPXKPXKXXPPXXXGXNPTGXXKNPGXSPXKXPLGXXXXXXXXXXRKNXXPXFSPXGXX 594
PPP P K PP +P SP G P G
Sbjct: 258 PPPPPPPKGSPPLAGSGSP--PPPPAAGSPPPPRTGSPPPPP-----TGSPPPPPAGGSP 310
Query: 595 GGPXXXXPPPPXXXRPXPXXXGXXPXPQKXGG--XXFXXXPPPXKXXXXPXXXXXPKKXX 768
P PPPP R P G P PQ G PPP P
Sbjct: 311 PPPRAGSPPPPPPPRGSP-PTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 369
Query: 769 LXXGPPPXKKXXKXXP 816
G PP + + P
Sbjct: 370 PPTGSPPTGRPPRGGP 385
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 4/61 (6%)
Frame = +3
Query: 618 PPPXKXXAPXXGXGGXSXPPKAXG----XXXXXXPPPX*XPXXXXXXXXPKKKXAXXXPP 785
PPP K P G G PP A PPP P P A PP
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 786 P 788
P
Sbjct: 321 P 321
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/78 (25%), Positives = 22/78 (28%), Gaps = 1/78 (1%)
Frame = +1
Query: 586 GXXGGPXXXXPPPPXXXRPXPXXXG-XXPXPQKXGGXXFXXXPPPXKXXXXPXXXXXPKK 762
G P PPPP + P G P P G PPP P P
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAG----SPPPPRTGSPPPPPTGSPPP 303
Query: 763 XXLXXGPPPXKKXXKXXP 816
PPP + P
Sbjct: 304 PPAGGSPPPPRAGSPPPP 321
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.22
Identities = 19/69 (27%), Positives = 22/69 (31%), Gaps = 3/69 (4%)
Frame = +1
Query: 601 PXXXXPPPPXXXRPXPXXXGXXPXPQKXGGXXFXXXP---PPXKXXXXPXXXXXPKKXXL 771
P PPPP P P G P P + G P PP P P
Sbjct: 273 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGT 332
Query: 772 XXGPPPXKK 798
PPP ++
Sbjct: 333 GSPPPPPRQ 341
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +2
Query: 215 GXPPXPPPXXPXPXAXGXGXGXXPPXXGXXGXPXKXGKTP 334
G PP PPP P G G PP G P + G P
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSP-PPPRTGSPP 279
Score = 31.1 bits (67), Expect = 1.2
Identities = 33/136 (24%), Positives = 36/136 (26%), Gaps = 2/136 (1%)
Frame = +1
Query: 415 PPPXKPXKXXPPXXXGXNPTGXXKNPGXSPXKXPLGXXXXXXXXXXRKNXXPXFSPXGXX 594
PPP P K PP +P SP G P G
Sbjct: 243 PPPPPPPKGSPPLAGSGSP--PPPPAAGSPPPPRTGSPPPPP-----TGSPPPPPAGGSP 295
Query: 595 GGPXXXXPPPPXXXRPXPXXXGXXPXPQKXGG--XXFXXXPPPXKXXXXPXXXXXPKKXX 768
P PPPP R P G P PQ G PPP P
Sbjct: 296 PPPRAGSPPPPPPPRGSP-PTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGS 354
Query: 769 LXXGPPPXKKXXKXXP 816
G PP + + P
Sbjct: 355 PPTGSPPTGRPPRGGP 370
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 4/61 (6%)
Frame = +3
Query: 618 PPPXKXXAPXXGXGGXSXPPKAXG----XXXXXXPPPX*XPXXXXXXXXPKKKXAXXXPP 785
PPP K P G G PP A PPP P P A PP
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 786 P 788
P
Sbjct: 306 P 306
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/78 (25%), Positives = 22/78 (28%), Gaps = 1/78 (1%)
Frame = +1
Query: 586 GXXGGPXXXXPPPPXXXRPXPXXXG-XXPXPQKXGGXXFXXXPPPXKXXXXPXXXXXPKK 762
G P PPPP + P G P P G PPP P P
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAG----SPPPPRTGSPPPPPTGSPPP 288
Query: 763 XXLXXGPPPXKKXXKXXP 816
PPP + P
Sbjct: 289 PPAGGSPPPPRAGSPPPP 306
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 32.7 bits (71), Expect = 0.39
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 194 GXGGXXLGXPPXPPPXXPXPXAXGXGXGXXPPXXG 298
G GG P PPP P P G G G P G
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 32.7 bits (71), Expect = 0.39
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 194 GXGGXXLGXPPXPPPXXPXPXAXGXGXGXXPPXXG 298
G GG P PPP P P G G G P G
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 288 GGXXPXPXPKAXGXGXXGGGXGGXPKXXPP 199
GG P P P G G GGG GG PP
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPP 75
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 288 GGXXPXPXPKAXGXGXXGGGXGG 220
GG P P P G G GGG GG
Sbjct: 70 GGCAPPPAPCGGGCGGGGGGCGG 92
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 288 GGXXPXPXPKAXGXGXXGGGXGGXPKXXPP 199
GG P P P G G GGG GG PP
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPP 75
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 288 GGXXPXPXPKAXGXGXXGGGXGG 220
GG P P P G G GGG GG
Sbjct: 70 GGCAPPPAPCGGGCGGGGGGCGG 92
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 32.3 bits (70), Expect = 0.51
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +2
Query: 194 GXGGXXLGXPPXPPPXXPXPXAXGXGXGXXPP 289
G GG G PP PPP P A G G PP
Sbjct: 25 GGGGCGCGAPP-PPPACAPPPAPACGGGAPPP 55
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.5 bits (63), Expect(2) = 0.70
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 288 GGXXPXPXPKAXGXGXXGGGXG 223
GG P P P A G G GGG G
Sbjct: 50 GGCAPPPPPPACGGGCGGGGGG 71
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 288 GGXXPXPXPKAXGXGXXGGGXG 223
GG P P P A G G GGG G
Sbjct: 107 GGCAPPPPPPACGGGCGGGGGG 128
Score = 21.0 bits (42), Expect(2) = 0.70
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -2
Query: 237 GGGXGGXPKXXPPXP 193
GGG GG PP P
Sbjct: 102 GGGCGGGCAPPPPPP 116
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.5 bits (68), Expect = 0.90
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -2
Query: 723 FXXGGVXXKXTPPXLLGGGXXPXXPXXGPXXXXGGGXXXXRPPPXXPG 580
F G + PP G G P P P G G RPPP G
Sbjct: 23 FSVGETASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKG 70
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = -2
Query: 732 PXXFXXGGVXXKXTPPXLLGGGXXPXXPXXGPXXXXGGGXXXXRPPPXXPG 580
P G + PP G G P P P G G RPPP G
Sbjct: 114 PQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKG 164
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = -2
Query: 732 PXXFXXGGVXXKXTPPXLLGGGXXPXXPXXGPXXXXGGGXXXXRPPPXXPG 580
P G + PP G G P P P G G RPPP G
Sbjct: 238 PQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKG 288
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -2
Query: 711 GVXXKXTPPXLLGGGXXPXXPXXGPXXXXGGGXXXXRPPPXXPG 580
G + PP G G P P P G G RPPP G
Sbjct: 90 GNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKG 133
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 690 PPXLLGGGXXPXXPXXGPXXXXGGGXXXXRPPPXXPGGEXG 568
PP L+GGG P P G G G P GG G
Sbjct: 154 PPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPG 194
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 690 PPXLLGGGXXPXXPXXGPXXXXGGGXXXXRPPPXXPGGEXG 568
PP L+GGG P P G G G P GG G
Sbjct: 434 PPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPG 474
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +1
Query: 595 GGPXXXXPPPPXXXRPXPXXXGXXPXPQKXGGXXFXXXPPP 717
GGP PPPP P P G P P GG PPP
Sbjct: 740 GGPP---PPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPP 776
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/77 (24%), Positives = 20/77 (25%)
Frame = +2
Query: 560 TXAPFSPPXXXXXXLXXXNPPPXKXXGPXXGXXGXXPPPKSXGGVXFXXTPPXXKXXGXR 739
T P PP PPP P G PPP + PP G
Sbjct: 710 TGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Query: 740 XXXXAQKKXGXXXAPPP 790
G PPP
Sbjct: 770 PPPPPPPPGGFKGGPPP 786
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +3
Query: 258 PXGGGKGXXPPXXGKXGXXKXXGKPXKKXFNKRXXKGPKPXKGPXXGVFPXXPPPXKTXQ 437
P GG PP G P GP P P G P PPP
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 438 KXPPP 452
K PP
Sbjct: 781 KGGPP 785
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Frame = +1
Query: 580 PXGXXGG--PXXXXPPPPXXXRPXPXXXGXXPXPQKXGGXXFXXXPPPXKXXXXPXXXXX 753
P GG P PPPP P P P P GG PPP P
Sbjct: 744 PPPPPGGLPPISGGPPPPP---PPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVI 800
Query: 754 P 756
P
Sbjct: 801 P 801
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +1
Query: 595 GGPXXXXPPPPXXXRPXPXXXGXXPXPQKXGGXXFXXXPPP 717
GGP PPPP P P G P P GG PPP
Sbjct: 740 GGPP---PPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPP 776
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/77 (24%), Positives = 20/77 (25%)
Frame = +2
Query: 560 TXAPFSPPXXXXXXLXXXNPPPXKXXGPXXGXXGXXPPPKSXGGVXFXXTPPXXKXXGXR 739
T P PP PPP P G PPP + PP G
Sbjct: 710 TGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Query: 740 XXXXAQKKXGXXXAPPP 790
G PPP
Sbjct: 770 PPPPPPPPGGFKGGPPP 786
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +3
Query: 258 PXGGGKGXXPPXXGKXGXXKXXGKPXKKXFNKRXXKGPKPXKGPXXGVFPXXPPPXKTXQ 437
P GG PP G P GP P P G P PPP
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Query: 438 KXPPP 452
K PP
Sbjct: 781 KGGPP 785
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Frame = +1
Query: 580 PXGXXGG--PXXXXPPPPXXXRPXPXXXGXXPXPQKXGGXXFXXXPPPXKXXXXPXXXXX 753
P GG P PPPP P P P P GG PPP P
Sbjct: 744 PPPPPGGLPPISGGPPPPP---PPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVI 800
Query: 754 P 756
P
Sbjct: 801 P 801
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +1
Query: 595 GGPXXXXPPPPXXXRPXPXXXGXXPXPQKXGGXXFXXXPPP 717
GGP PPPP P P G P P GG PPP
Sbjct: 323 GGPP---PPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPP 359
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/77 (24%), Positives = 20/77 (25%)
Frame = +2
Query: 560 TXAPFSPPXXXXXXLXXXNPPPXKXXGPXXGXXGXXPPPKSXGGVXFXXTPPXXKXXGXR 739
T P PP PPP P G PPP + PP G
Sbjct: 293 TGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Query: 740 XXXXAQKKXGXXXAPPP 790
G PPP
Sbjct: 353 PPPPPPPPGGFKGGPPP 369
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/65 (29%), Positives = 19/65 (29%)
Frame = +3
Query: 258 PXGGGKGXXPPXXGKXGXXKXXGKPXKKXFNKRXXKGPKPXKGPXXGVFPXXPPPXKTXQ 437
P GG PP G P GP P P G P PPP
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 363
Query: 438 KXPPP 452
K PP
Sbjct: 364 KGGPP 368
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Frame = +1
Query: 580 PXGXXGG--PXXXXPPPPXXXRPXPXXXGXXPXPQKXGGXXFXXXPPPXKXXXXPXXXXX 753
P GG P PPPP P P P P GG PPP P
Sbjct: 327 PPPPPGGLPPISGGPPPPP---PPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVI 383
Query: 754 P 756
P
Sbjct: 384 P 384
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 29.5 bits (63), Expect = 3.6
Identities = 28/93 (30%), Positives = 29/93 (31%), Gaps = 2/93 (2%)
Frame = +1
Query: 415 PPPXKPXKXXPPXXXGXNPTGXXKNPGXSPXKXPLGXXXXXXXXXXRKNXXPXFSPXGXX 594
PPP KP PP G P G N G P P G N P P G
Sbjct: 132 PPPCKPCPEGPPGPAG--PPGPQGNKG--PLGPP-GPPGPEGPNGTAGNKGPA-GPPGPG 185
Query: 595 GGPXXXXPPPP--XXXRPXPXXXGXXPXPQKXG 687
G P PP P P G P + G
Sbjct: 186 GKPGPAGPPGENGRNGEPQPGSPGEPGRPGQPG 218
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.1 bits (62), Expect = 4.8
Identities = 32/130 (24%), Positives = 34/130 (26%), Gaps = 6/130 (4%)
Frame = +1
Query: 415 PPPXKPXKXXPPXXXGXNPTGXXKNPGXSPXKXPLGXXXXXXXXXXRKNXXPXF-----S 579
PPP KP PP G P G +PG + G R P
Sbjct: 139 PPPCKPCPQGPPGPPG--PPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPG 196
Query: 580 PXGXXGGPXXXXP-PPPXXXRPXPXXXGXXPXPQKXGGXXFXXXPPPXKXXXXPXXXXXP 756
P G G P P P P P P G PP K P
Sbjct: 197 PAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGA 256
Query: 757 KKXXLXXGPP 786
GPP
Sbjct: 257 DGQSGPPGPP 266
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.1 bits (62), Expect = 4.8
Identities = 32/130 (24%), Positives = 34/130 (26%), Gaps = 6/130 (4%)
Frame = +1
Query: 415 PPPXKPXKXXPPXXXGXNPTGXXKNPGXSPXKXPLGXXXXXXXXXXRKNXXPXF-----S 579
PPP KP PP G P G +PG + G R P
Sbjct: 139 PPPCKPCPQGPPGPPG--PPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPG 196
Query: 580 PXGXXGGPXXXXP-PPPXXXRPXPXXXGXXPXPQKXGGXXFXXXPPPXKXXXXPXXXXXP 756
P G G P P P P P P G PP K P
Sbjct: 197 PAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGA 256
Query: 757 KKXXLXXGPP 786
GPP
Sbjct: 257 DGQSGPPGPP 266
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/91 (26%), Positives = 25/91 (27%), Gaps = 4/91 (4%)
Frame = +1
Query: 580 PXGXXGGPXXXXPPP----PXXXRPXPXXXGXXPXPQKXGGXXFXXXPPPXKXXXXPXXX 747
P P PPP P P P G P GG PPP P
Sbjct: 368 PPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYG----PPPPGGPGAPGSY 423
Query: 748 XXPKKXXLXXGPPPXKKXXKXXPTXXXHXPV 840
P+ GPPP P PV
Sbjct: 424 GPPQGGPGGFGPPPPGGPGAYGPPPTGFPPV 454
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.1 bits (62), Expect = 4.8
Identities = 28/93 (30%), Positives = 29/93 (31%), Gaps = 2/93 (2%)
Frame = +1
Query: 415 PPPXKPXKXXPPXXXGXNPTGXXKNPGXSPXKXPLGXXXXXXXXXXRKNXXPXFSPXGXX 594
PPP KP PP G P G N G P P G N P P G
Sbjct: 134 PPPCKPCPEGPPGPAG--PPGPDGNKG--PLGPP-GPPGPEGPNGEPGNKGPA-GPPGPG 187
Query: 595 GGPXXXXPPPP--XXXRPXPXXXGXXPXPQKXG 687
G P PP P P G P + G
Sbjct: 188 GKPGPAGPPGENGNNGEPQPGAPGEPGQPGQPG 220
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +3
Query: 576 LPXGXXGGAXXXXTPPPXKXXAPXXGXGGXSXPP 677
LP G GG PPP P G GG S PP
Sbjct: 19 LPSGGGGGCGCAPPPPP-----PPCGCGGPSLPP 47
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 215 GXPPXPPPXXPXPXAXGXGXGXXPP 289
G PP PP P P A G G G PP
Sbjct: 788 GAPP-PPGMRPPPGAPGGGGGMYPP 811
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 215 GXPPXPPPXXPXPXAXGXGXGXXPP 289
G PP PP P P A G G G PP
Sbjct: 788 GAPP-PPGMRPPPGAPGGGGGMYPP 811
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 28.7 bits (61), Expect = 6.3
Identities = 32/130 (24%), Positives = 34/130 (26%), Gaps = 6/130 (4%)
Frame = +1
Query: 415 PPPXKPXKXXPPXXXGXNPTGXXKNPGXSPXKXPLGXXXXXXXXXXRKNXXPXF-----S 579
PPP KP PP G P G +PG + G R P
Sbjct: 144 PPPCKPCPQGPPGPPG--PPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPG 201
Query: 580 PXGXXGGPXXXXP-PPPXXXRPXPXXXGXXPXPQKXGGXXFXXXPPPXKXXXXPXXXXXP 756
P G G P P P P P P G PP K P
Sbjct: 202 PAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGV 261
Query: 757 KKXXLXXGPP 786
GPP
Sbjct: 262 DGQSGPPGPP 271
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.7 bits (61), Expect = 6.3
Identities = 35/164 (21%), Positives = 38/164 (23%), Gaps = 1/164 (0%)
Frame = +3
Query: 297 GKXGXXKXXGKPXKKXFNKRXXKGPKPXKGPXXGVFPXXPPPXKTXQKXPPPXXGXKPHX 476
G G GKP K + P K P P PPP K + PP G
Sbjct: 107 GPPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAP 166
Query: 477 XLXKSRXFPXXXXXXXXXXXXXXXXXXXXXXXFLPXGXXGGAXXXXTPPPXKXXAP-XXG 653
P G G A P AP G
Sbjct: 167 GDPGEAGTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAG 226
Query: 654 XGGXSXPPKAXGXXXXXXPPPX*XPXXXXXXXXPKKKXAXXXPP 785
G + PP G PP P P PP
Sbjct: 227 DAGPAGPPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDGQAGPP 270
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 215 GXPPXPPPXXPXPXAXGXGXGXXPP 289
G PP PP P P A G G G PP
Sbjct: 788 GAPP-PPGMRPPPGAPGGGGGMYPP 811
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 215 GXPPXPPPXXPXPXAXGXGXGXXPP 289
G PP PP P P A G G G PP
Sbjct: 788 GAPP-PPGMRPPPGAPGGGGGMYPP 811
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 6.3
Identities = 29/127 (22%), Positives = 34/127 (26%), Gaps = 2/127 (1%)
Frame = +1
Query: 415 PPPXKPXKXXPPXXXGXNPTGXXKNPGXS-PXKXPLGXXXXXXXXXXRKNXXPXFSPXGX 591
PP +P PP + PG P P G P + P
Sbjct: 661 PPNIQPPVPHPPPMGFPFQHQLTQLPGQPRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPP 720
Query: 592 XGGPXXXXPPPPXXXRPXPXXXGXXPXPQKXGGXXFXXXPPPXKXXXXP-XXXXXPKKXX 768
P PPPP P P P G PPP P P +
Sbjct: 721 ---PPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGG 777
Query: 769 LXXGPPP 789
+ PPP
Sbjct: 778 MHHMPPP 784
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.7 bits (61), Expect = 6.3
Identities = 35/164 (21%), Positives = 38/164 (23%), Gaps = 1/164 (0%)
Frame = +3
Query: 297 GKXGXXKXXGKPXKKXFNKRXXKGPKPXKGPXXGVFPXXPPPXKTXQKXPPPXXGXKPHX 476
G G GKP K + P K P P PPP K + PP G
Sbjct: 107 GPPGPAGVPGKPGKPGRPGAPGQPGVPGKPPTAPCEPTTPPPCKPCPQGPPGPPGPPGAP 166
Query: 477 XLXKSRXFPXXXXXXXXXXXXXXXXXXXXXXXFLPXGXXGGAXXXXTPPPXKXXAP-XXG 653
P G G A P AP G
Sbjct: 167 GDPGEAGTPGRPGTDATPGLPGPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAG 226
Query: 654 XGGXSXPPKAXGXXXXXXPPPX*XPXXXXXXXXPKKKXAXXXPP 785
G + PP G PP P P PP
Sbjct: 227 DAGPAGPPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDGQAGPP 270
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = +3
Query: 618 PPPXKXXAPXXGXGGXSXPPKAXGXXXXXXPPPX*XPXXXXXXXXPKKKXAXXXPPP 788
PPP AP PP G PPP P K PPP
Sbjct: 522 PPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPP 578
>Z49130-7|CAA88972.2| 316|Caenorhabditis elegans Hypothetical
protein T06D8.9 protein.
Length = 316
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 264 PKAXGXGXXGGGXGGXPKXXPP 199
P G G GGG GG P PP
Sbjct: 189 PGGPGSGGGGGGPGGYPSAPPP 210
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Frame = +3
Query: 258 PXGGGKGXXPPXXGK--XGXXKXXGKPXKKXFNKRXXKGPKPXKGPXXG-VFPXXPPP-X 425
P GGG+G PP G+ G G+P + P+ + P +P PPP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPPGQP----YGPPGGYPPQQQRPPYQAQPYPGPPPPQQ 728
Query: 426 KTXQKXPPPXXGXKPH 473
+ PPP P+
Sbjct: 729 QRGYGYPPPPQPGHPY 744
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 387 PXXGVFPXXPPPXKTXQKXPPPXXGXKPH 473
P G+ P PPP Q PPP G H
Sbjct: 89 PPHGLGPPPPPPHYYTQPPPPPQSGYYHH 117
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Frame = +3
Query: 258 PXGGGKGXXPPXXGK--XGXXKXXGKPXKKXFNKRXXKGPKPXKGPXXG-VFPXXPPP-X 425
P GGG+G PP G+ G G+P + P+ + P +P PPP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPPGQP----YGPPGGYPPQQQRPPYQAQPYPGPPPPQQ 728
Query: 426 KTXQKXPPPXXGXKPH 473
+ PPP P+
Sbjct: 729 QRGYGYPPPPQPGHPY 744
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.149 0.510
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,877,937
Number of Sequences: 27780
Number of extensions: 246252
Number of successful extensions: 1427
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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