Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_B19
         (906 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   5.1  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   6.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   8.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   8.8  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   8.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   8.8  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -1

Query: 306 ILVLSLQYLVKNPDLIAATPKSPWICCTLCNTVL 205
           +L L   +L KNPD I A   S ++    CN++L
Sbjct: 390 VLALVRPFL-KNPDAIPAFLSSLFLWLGYCNSLL 422


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +1

Query: 310 YNTSKTWTTQICYKFFAFC*NYW 378
           +N   T+T +I Y  F     YW
Sbjct: 192 FNAFPTYTHEITYSLFGMIMMYW 214


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 188 STVMAFFLKLLDIQFLQLYIYLFLKRTI 105
           S++ +FF+ LL +  + L IYL  +R +
Sbjct: 200 SSLGSFFIPLLLMSLVYLEIYLATRRRL 227


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 188 STVMAFFLKLLDIQFLQLYIYLFLKRTI 105
           S++ +FF+ LL +  + L IYL  +R +
Sbjct: 200 SSLGSFFIPLLLMSLVYLEIYLATRRRL 227


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +3

Query: 417 QH*NILSNLYKSFKELIWMQGGLS 488
           Q  N+L  L++  ++ +++Q G+S
Sbjct: 448 QRKNVLDRLFRMDRDAVYLQPGMS 471


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 188 STVMAFFLKLLDIQFLQLYIYLFLKRTI 105
           S++ +FF+ LL +  + L IYL  +R +
Sbjct: 200 SSLGSFFIPLLLMSLVYLEIYLATRRRL 227


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,494
Number of Sequences: 438
Number of extensions: 3623
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)