Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_B18
(916 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.004
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.004
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.004
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 37 0.017
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.031
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.031
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 36 0.031
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 36 0.031
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.16
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.16
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.16
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 32 0.50
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 32 0.50
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 32 0.66
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 30 2.0
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 2.0
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 2.0
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 30 2.0
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 2.7
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 29 3.5
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 3.5
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 3.5
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 3.5
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 3.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 3.5
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.6
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.6
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 6.1
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 6.1
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 6.1
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 28 8.1
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 28 8.1
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 28 8.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/68 (36%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Frame = -2
Query: 615 GXPPXWGKXXXPPXXGGXPPPPPKXXGPGXFXG----GXGXGXXKKXPXPXGGGGFFXXX 448
G PP PP GG PPPPP P G G P P GG F
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG-FKGG 783
Query: 447 XXPXPPPG 424
P PPPG
Sbjct: 784 PPPPPPPG 791
Score = 33.9 bits (74), Expect = 0.16
Identities = 24/64 (37%), Positives = 24/64 (37%)
Frame = -2
Query: 615 GXPPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPX 436
G PP G PP GG PPPPP PG G P P G P
Sbjct: 712 GPPPPPG---LPPITGGPPPPPP----PGGLP--PITGGPPPPPPPGGLPPISGGPPPPP 762
Query: 435 PPPG 424
PPPG
Sbjct: 763 PPPG 766
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/68 (36%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Frame = -2
Query: 615 GXPPXWGKXXXPPXXGGXPPPPPKXXGPGXFXG----GXGXGXXKKXPXPXGGGGFFXXX 448
G PP PP GG PPPPP P G G P P GG F
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG-FKGG 783
Query: 447 XXPXPPPG 424
P PPPG
Sbjct: 784 PPPPPPPG 791
Score = 33.9 bits (74), Expect = 0.16
Identities = 24/64 (37%), Positives = 24/64 (37%)
Frame = -2
Query: 615 GXPPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPX 436
G PP G PP GG PPPPP PG G P P G P
Sbjct: 712 GPPPPPG---LPPITGGPPPPPP----PGGLP--PITGGPPPPPPPGGLPPISGGPPPPP 762
Query: 435 PPPG 424
PPPG
Sbjct: 763 PPPG 766
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/68 (36%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Frame = -2
Query: 615 GXPPXWGKXXXPPXXGGXPPPPPKXXGPGXFXG----GXGXGXXKKXPXPXGGGGFFXXX 448
G PP PP GG PPPPP P G G P P GG F
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG-FKGG 366
Query: 447 XXPXPPPG 424
P PPPG
Sbjct: 367 PPPPPPPG 374
Score = 33.9 bits (74), Expect = 0.16
Identities = 24/64 (37%), Positives = 24/64 (37%)
Frame = -2
Query: 615 GXPPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPX 436
G PP G PP GG PPPPP PG G P P G P
Sbjct: 295 GPPPPPG---LPPITGGPPPPPP----PGGLP--PITGGPPPPPPPGGLPPISGGPPPPP 345
Query: 435 PPPG 424
PPPG
Sbjct: 346 PPPG 349
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 37.1 bits (82), Expect = 0.017
Identities = 21/66 (31%), Positives = 23/66 (34%)
Frame = -2
Query: 621 FRGXPPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXX 442
F P +G P GG PPPP G G G P P GG G +
Sbjct: 390 FAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPT 449
Query: 441 PXPPPG 424
PP G
Sbjct: 450 GFPPVG 455
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 425 PGGGXGXFXXXKKPPPPXGXGXFFXXPXPLPP 520
P GG G F PPPP G G + P PP
Sbjct: 426 PQGGPGGFG----PPPPGGPGAYGPPPTGFPP 453
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 36.3 bits (80), Expect = 0.031
Identities = 23/61 (37%), Positives = 25/61 (40%)
Frame = -2
Query: 609 PPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPXPP 430
PP G+ PP G PPPPP P F G G G P P G + P PP
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPP----PSRF-GPPGMGGMPPPPPP---GMRYPGGMPPPPP 352
Query: 429 P 427
P
Sbjct: 353 P 353
Score = 34.7 bits (76), Expect = 0.093
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = -2
Query: 582 PPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPXPPPG 424
PP G PPPPP PG G G P P G P PPPG
Sbjct: 290 PPSSGMWPPPPPPP--PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 340
Score = 31.9 bits (69), Expect = 0.66
Identities = 22/68 (32%), Positives = 23/68 (33%), Gaps = 4/68 (5%)
Frame = -2
Query: 618 RGXPPXWGKXXXPPXXG----GXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXX 451
R PP G PP G G PPPP P G + P P G G
Sbjct: 324 RFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMI-- 381
Query: 450 XXXPXPPP 427
P PPP
Sbjct: 382 --PPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 36.3 bits (80), Expect = 0.031
Identities = 23/61 (37%), Positives = 25/61 (40%)
Frame = -2
Query: 609 PPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPXPP 430
PP G+ PP G PPPPP P F G G G P P G + P PP
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPP----PSRF-GPPGMGGMPPPPPP---GMRYPGGMPPPPP 362
Query: 429 P 427
P
Sbjct: 363 P 363
Score = 34.7 bits (76), Expect = 0.093
Identities = 20/53 (37%), Positives = 20/53 (37%)
Frame = -2
Query: 582 PPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPXPPPG 424
PP G PPPPP PG G G P P G P PPPG
Sbjct: 300 PPSSGMWPPPPPPP--PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 350
Score = 31.9 bits (69), Expect = 0.66
Identities = 22/68 (32%), Positives = 23/68 (33%), Gaps = 4/68 (5%)
Frame = -2
Query: 618 RGXPPXWGKXXXPPXXG----GXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXX 451
R PP G PP G G PPPP P G + P P G G
Sbjct: 334 RFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMI-- 391
Query: 450 XXXPXPPP 427
P PPP
Sbjct: 392 --PPPPPP 397
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 36.3 bits (80), Expect = 0.031
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -2
Query: 615 GXPPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXG 502
G PP G PP GG PPP GPG G G G
Sbjct: 181 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 218
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 36.3 bits (80), Expect = 0.031
Identities = 17/38 (44%), Positives = 17/38 (44%)
Frame = -2
Query: 615 GXPPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXG 502
G PP G PP GG PPP GPG G G G
Sbjct: 461 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 498
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = -2
Query: 618 RGXPPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXP 439
+G PP G PP PPPP+ P G P P GG P
Sbjct: 244 KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG------SPPPPPAGGSPPPPRAGSP 297
Query: 438 XPPP 427
PPP
Sbjct: 298 PPPP 301
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = -2
Query: 615 GXPPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPX 436
G PP PP G PPPP+ P G P P GG
Sbjct: 270 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 329
Query: 435 PPP 427
PPP
Sbjct: 330 PPP 332
Score = 31.5 bits (68), Expect = 0.87
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -2
Query: 609 PPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPXPP 430
PP K P G PPPPP P G P P GG PP
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 429 P 427
P
Sbjct: 299 P 299
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -2
Query: 597 GKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPXPPP 427
GK PP PPPPPK P G G P P G P PPP
Sbjct: 227 GKRQAPPAGSPPPPPPPKGSPP---LAGSG----SPPPPPAAGSPPPPRTGSPPPPP 276
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 2/63 (3%)
Frame = -2
Query: 609 PPXWGKXXXPPXXGGXPPPPPKXXG--PGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPX 436
PP PP G PPPP G P G P P GG
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 435 PPP 427
PPP
Sbjct: 298 PPP 300
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = -2
Query: 618 RGXPPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXP 439
+G PP G PP PPPP+ P G P P GG P
Sbjct: 265 KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG------SPPPPPAGGSPPPPRAGSP 318
Query: 438 XPPP 427
PPP
Sbjct: 319 PPPP 322
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = -2
Query: 615 GXPPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPX 436
G PP PP G PPPP+ P G P P GG
Sbjct: 291 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 350
Query: 435 PPP 427
PPP
Sbjct: 351 PPP 353
Score = 31.5 bits (68), Expect = 0.87
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -2
Query: 609 PPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPXPP 430
PP K P G PPPPP P G P P GG PP
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 429 P 427
P
Sbjct: 320 P 320
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -2
Query: 597 GKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPXPPP 427
GK PP PPPPPK P G G P P G P PPP
Sbjct: 248 GKRQAPPAGSPPPPPPPKGSPP---LAGSG----SPPPPPAAGSPPPPRTGSPPPPP 297
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 2/63 (3%)
Frame = -2
Query: 609 PPXWGKXXXPPXXGGXPPPPPKXXG--PGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPX 436
PP PP G PPPP G P G P P GG
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 435 PPP 427
PPP
Sbjct: 319 PPP 321
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/64 (31%), Positives = 22/64 (34%)
Frame = -2
Query: 618 RGXPPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXP 439
+G PP G PP PPPP+ P G P P GG P
Sbjct: 250 KGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG------SPPPPPAGGSPPPPRAGSP 303
Query: 438 XPPP 427
PPP
Sbjct: 304 PPPP 307
Score = 33.9 bits (74), Expect = 0.16
Identities = 19/63 (30%), Positives = 20/63 (31%)
Frame = -2
Query: 615 GXPPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPX 436
G PP PP G PPPP+ P G P P GG
Sbjct: 276 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP 335
Query: 435 PPP 427
PPP
Sbjct: 336 PPP 338
Score = 31.5 bits (68), Expect = 0.87
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -2
Query: 609 PPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPXPP 430
PP K P G PPPPP P G P P GG PP
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 429 P 427
P
Sbjct: 305 P 305
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = -2
Query: 597 GKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPXPPP 427
GK PP PPPPPK P G G P P G P PPP
Sbjct: 233 GKRQAPPAGSPPPPPPPKGSPP---LAGSG----SPPPPPAAGSPPPPRTGSPPPPP 282
Score = 29.1 bits (62), Expect = 4.6
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 2/63 (3%)
Frame = -2
Query: 609 PPXWGKXXXPPXXGGXPPPPPKXXG--PGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPX 436
PP PP G PPPP G P G P P GG
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 435 PPP 427
PPP
Sbjct: 304 PPP 306
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = -2
Query: 654 GPFGXXXKKXFFRGXPPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXP 478
GP G F G P PP GG PPPPP P G G + P P
Sbjct: 79 GPGGIPPPPPMFAGGIPP-----PPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRP 132
Score = 32.3 bits (70), Expect = 0.50
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -2
Query: 633 KKXFFRGXPPXWGKXXXPPXXGGXPPPPPKXXG 535
K FF P G PP GG PPPPP G
Sbjct: 60 KPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAG 92
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = -2
Query: 609 PPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGG 463
PP + PP G PPPP P GG G P G GG
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -2
Query: 582 PPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPXPPPG 424
P GG P P GPG G P GGGG + P PG
Sbjct: 771 PAPPGGRQAPMPPRGGPG---APPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = -2
Query: 609 PPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGG 463
PP + PP G PPPP P GG G P G GG
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -2
Query: 582 PPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPXPPPG 424
P GG P P GPG G P GGGG + P PG
Sbjct: 771 PAPPGGRQAPMPPRGGPG---APPPPGMRPPPGAPGGGGGMYPPLIPTRPGPG 820
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 31.9 bits (69), Expect = 0.66
Identities = 27/82 (32%), Positives = 27/82 (32%), Gaps = 5/82 (6%)
Frame = -2
Query: 654 GPFGXXXKKXFFRGXPPXWGKXXXPPXXGGXPPPP-----PKXXGPGXFXGGXGXGXXKK 490
GP G K G PP PP G P PP P GP G G
Sbjct: 210 GPTGEPGK--VINGAPPGPPGPPGPPGPQGPPGPPGKDGQPGKAGPPGLPGDPGEKGSDG 267
Query: 489 XPXPXGGGGFFXXXXXPXPPPG 424
P P GG G P PPG
Sbjct: 268 LPGPHGGTG-------PRGPPG 282
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = -2
Query: 600 WGKXXXPPXXGGXPPPPPKXXGPGXFXGGXG-XGXXKKXPXPXGGGGF 460
WG P GG P GPG + G G G GGGGF
Sbjct: 20 WGPGFGGPGFGGPGSGGPGPRGPGEWNNGGGRGGFGGNNGWNNGGGGF 67
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -2
Query: 609 PPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGG 463
PP P PPPPP G G G P P G GG
Sbjct: 614 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -2
Query: 609 PPXWGKXXXPPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGG 463
PP P PPPPP G G G P P G GG
Sbjct: 440 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -2
Query: 582 PPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPXPPP 427
PP G PPPP P G + P P G G P PPP
Sbjct: 66 PPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTG-------TPPPPP 110
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -2
Query: 582 PPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPXPPP 427
PP G PPP G G G + P P G G P PPP
Sbjct: 97 PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGS-------PPPPP 141
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -2
Query: 582 PPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPXPPP 427
PP G PPP G G G + P P G G P PPP
Sbjct: 128 PPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGS-------PPPPP 172
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = -2
Query: 582 PPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPXPPP 427
PP G PPP G G G + P P G G P PPP
Sbjct: 34 PPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTG-------TPPPPP 78
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = -2
Query: 582 PPXXGGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPXPPP 427
PP G P PPP G G G + P P G G P PPP
Sbjct: 223 PPKGTGSPTPPPT--GEPQDLSGEGNASRRPPPPPKGTGS-------PPPPP 265
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -2
Query: 609 PPXWGKXXXPPXXG-GXPPPPPKXXGPGXFXGGXG 508
PP + PP G G PPPP PG GG G
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -2
Query: 570 GGXPPPPPKXXGPGXFXGG-XGXGXXKKXPXPXGGG 466
G PPP P G G GG G G P P GGG
Sbjct: 47 GCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -2
Query: 537 GPGXFXGGXGXGXXKKX--PXPXGGGGFFXXXXXPXPPP 427
G G + GG G G GGGG+ P PPP
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -2
Query: 570 GGXPPPPPKXXGPGXFXGG-XGXGXXKKXPXPXGGG 466
G PPP P G G GG G G P P GGG
Sbjct: 47 GCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -2
Query: 537 GPGXFXGGXGXGXXKKX--PXPXGGGGFFXXXXXPXPPP 427
G G + GG G G GGGG+ P PPP
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPP 306
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -2
Query: 609 PPXWGKXXXPPXXG-GXPPPPPKXXGPGXFXGGXG 508
PP + PP G G PPPP PG GG G
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 3/31 (9%)
Frame = -2
Query: 615 GXPPXWGKXXXPPXXGGXPP---PPPKXXGP 532
G PP W + PP G PP PPP P
Sbjct: 39 GPPPPWHRNRGPPPFGPPPPWDRPPPPWRRP 69
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 531 GXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPXPPPG 424
G + G G P P G GGF P P PG
Sbjct: 649 GWYGSGGGSSMPMPVPPPGGLGGFMPPPPPPPPMPG 684
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 430 GGXGGXXXXKKTPPPXGXGXFFXXPXPXXP 519
G GG PPP G G F P P P
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPP 681
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 531 GXFXGGXGXGXXKKXPXPXGGGGFFXXXXXPXPPPG 424
G + G G P P G GGF P P PG
Sbjct: 649 GWYGSGGGSSMPMPVPPPGGLGGFMPPPPPPPPMPG 684
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 430 GGXGGXXXXKKTPPPXGXGXFFXXPXPXXP 519
G GG PPP G G F P P P
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPP 681
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 609 PPXWGKXXXPPXXGGXPPPPPKXXGPG 529
PP +G PP G PPPPP G G
Sbjct: 290 PPPFG-FFPPPPRGHFPPPPPHFMGRG 315
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 609 PPXWGKXXXPPXXGGXPPPPPKXXGPG 529
PP +G PP G PPPPP G G
Sbjct: 290 PPPFG-FFPPPPRGHFPPPPPHFMGRG 315
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 3.5
Identities = 24/67 (35%), Positives = 25/67 (37%), Gaps = 3/67 (4%)
Frame = -2
Query: 615 GXPPXWG-KXXXPPXXGGXPP-PPPKXXGPGXFXGGXGXG-XXKKXPXPXGGGGFFXXXX 445
G PP + PP G PP PPP GP G G K P P GF
Sbjct: 697 GVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGF--NAG 754
Query: 444 XPXPPPG 424
P PP G
Sbjct: 755 APPPPFG 761
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -2
Query: 570 GGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGG 463
G PPPPP G G GG G G GGGG
Sbjct: 51 GCAPPPPPPACGGGCGGGGGGCGG---GGGGCGGGG 83
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -2
Query: 570 GGXPPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGG 463
G PPPPP G G GG G G GGGG
Sbjct: 108 GCAPPPPPPACGGGCGGGGGGCGGG----CGGGGGG 139
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 615 GXPPXWGKXXXPPXXGGXPPPPPKXXG 535
G PP PP GG PPPPP G
Sbjct: 574 GAPPP--PPPPPPMLGGPPPPPPPPGG 598
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = -2
Query: 582 PPXXGGXPP--PPPKXXGPGXFXGGXGXGXXKKXPXPXGGGG 463
P GG P PP GPG GG G G + P P G G
Sbjct: 144 PGAVGGPGPKGPPGPPGGPGEL-GGPGRGGNRGPPGPRGPPG 184
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = -2
Query: 582 PPXXGGXPP--PPPKXXGPGXFXGGXGXGXXKKXPXPXGGGG 463
P GG P PP GPG GG G G + P P G G
Sbjct: 144 PGAVGGPGPKGPPGPPGGPGEL-GGPGRGGNRGPPGPRGPPG 184
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Frame = -2
Query: 579 PXXGGXPPPPPKXXGPGX--FXGGXGXGXXKKXPXPXGGGGFFXXXXXPXPP 430
P G P PP GPG GG G + P P G G P P
Sbjct: 204 PGPSGRPGPPGPAGGPGQPGHSGGAGSPGPQGPPGPSGQPGHSGNDGVPGAP 255
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = -2
Query: 579 PXXGGXPPPPPK-XXGP-GXFXGGXGXGXXKKXPXPXGGGGF 460
P GG PPP P P G + G G GGGG+
Sbjct: 153 PSYGGPPPPAPSFSHAPSGGYSSGGSSGGGYSSGGSSGGGGY 194
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -2
Query: 561 PPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGF 460
PPPPP P GG G P P GG +
Sbjct: 63 PPPPPPPPAP--IGGGAGYAAPFGGPGPVGGASY 94
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -2
Query: 561 PPPPPKXXGPGXFXGGXGXGXXKKXPXPXGGGGF 460
PPPPP P GG G P P GG +
Sbjct: 63 PPPPPPPPAP--IGGGAGYAAPFGGPGPVGGASY 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,147,791
Number of Sequences: 27780
Number of extensions: 156164
Number of successful extensions: 1200
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -