Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_B15
         (854 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145675-1|AAD38650.1|  298|Drosophila melanogaster BcDNA.GH1235...    57   4e-08
AF104405-1|AAC98512.1|  298|Drosophila melanogaster sarcoplasmic...    57   4e-08
AE014298-1033|AAF46255.1|  298|Drosophila melanogaster CG1435-PA...    57   4e-08
AE014298-1034|AAS65270.1|  231|Drosophila melanogaster CG1435-PB...    53   4e-07

>AF145675-1|AAD38650.1|  298|Drosophila melanogaster BcDNA.GH12350
           protein.
          Length = 298

 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
 Frame = +2

Query: 377 HRVASQLIKTLLQQTTWPTGNRQKETARSESDSDSDTX---------CKGLDR--SXFWX 523
           H++ + +++ + Q +      + +    S+SDSDSD            K  +R  S FW 
Sbjct: 66  HQMPTAVVQAVRQYSKKAGAAKLRREVESDSDSDSDDEFERRRQKMDSKRSERGDSAFWR 125

Query: 524 RKMRTVHNILNVDKDXLISYNDFLLFAERSSLLA--PPXKXAKDSPTSSK*LGXTMGXLN 697
           RKMRT+H IL+V+ D ++S++DF L A+R S L    P   A+ +           G + 
Sbjct: 126 RKMRTLHRILDVNHDGVVSFDDFSLLAKRFSDLGHLTPEVAAEFNDVIKHTWEEQFGEIT 185

Query: 698 PYNFXTVD 721
           PYN  T +
Sbjct: 186 PYNLVTAE 193


>AF104405-1|AAC98512.1|  298|Drosophila melanogaster sarcoplasmic
           calcium-binding proteinprotein.
          Length = 298

 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
 Frame = +2

Query: 377 HRVASQLIKTLLQQTTWPTGNRQKETARSESDSDSDTX---------CKGLDR--SXFWX 523
           H++ + +++ + Q +      + +    S+SDSDSD            K  +R  S FW 
Sbjct: 66  HQMPTAVVQAVRQYSKKAGAAKLRREVESDSDSDSDDEFERRRQKMDSKRSERGDSAFWR 125

Query: 524 RKMRTVHNILNVDKDXLISYNDFLLFAERSSLLA--PPXKXAKDSPTSSK*LGXTMGXLN 697
           RKMRT+H IL+V+ D ++S++DF L A+R S L    P   A+ +           G + 
Sbjct: 126 RKMRTLHRILDVNHDGVVSFDDFSLLAKRFSDLGHLTPEVAAEFNDVIKHTWEEQFGEIT 185

Query: 698 PYNFXTVD 721
           PYN  T +
Sbjct: 186 PYNLVTAE 193


>AE014298-1033|AAF46255.1|  298|Drosophila melanogaster CG1435-PA,
           isoform A protein.
          Length = 298

 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
 Frame = +2

Query: 377 HRVASQLIKTLLQQTTWPTGNRQKETARSESDSDSDTX---------CKGLDR--SXFWX 523
           H++ + +++ + Q +      + +    S+SDSDSD            K  +R  S FW 
Sbjct: 66  HQMPTAVVQAVRQYSKKAGAAKLRREVESDSDSDSDDEFERRRQKMDSKRSERGDSAFWR 125

Query: 524 RKMRTVHNILNVDKDXLISYNDFLLFAERSSLLA--PPXKXAKDSPTSSK*LGXTMGXLN 697
           RKMRT+H IL+V+ D ++S++DF L A+R S L    P   A+ +           G + 
Sbjct: 126 RKMRTLHRILDVNHDGVVSFDDFSLLAKRFSDLGHLTPEVAAEFNDVIKHTWEEQFGEIT 185

Query: 698 PYNFXTVD 721
           PYN  T +
Sbjct: 186 PYNLVTAE 193


>AE014298-1034|AAS65270.1|  231|Drosophila melanogaster CG1435-PB,
           isoform B protein.
          Length = 231

 Score = 53.2 bits (122), Expect = 4e-07
 Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
 Frame = +2

Query: 446 KETARSESDSDSDTX---------CKGLDR--SXFWXRKMRTVHNILNVDKDXLISYNDF 592
           +    S+SDSDSD            K  +R  S FW RKMRT+H IL+V+ D ++S++DF
Sbjct: 22  RREVESDSDSDSDDEFERRRQKMDSKRSERGDSAFWRRKMRTLHRILDVNHDGVVSFDDF 81

Query: 593 LLFAERSSLLA--PPXKXAKDSPTSSK*LGXTMGXLNPYNFXTVD 721
            L A+R S L    P   A+ +           G + PYN  T +
Sbjct: 82  SLLAKRFSDLGHLTPEVAAEFNDVIKHTWEEQFGEITPYNLVTAE 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,665,491
Number of Sequences: 53049
Number of extensions: 653403
Number of successful extensions: 1361
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)