Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_B09
(887 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 35 9e-04
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 35 0.001
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 30 0.025
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 26 0.53
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 26 0.53
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.70
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 24 1.6
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 24 1.6
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 23 3.7
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 4.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 4.9
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 8.6
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 8.6
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 8.6
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 8.6
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 8.6
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 8.6
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 35.1 bits (77), Expect = 9e-04
Identities = 34/118 (28%), Positives = 55/118 (46%)
Frame = +2
Query: 158 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 337
M K++ N+ VI HVD GKST T L+ K G I R E +F + E + + K
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGI-DKRTIE-KF-EKEAQEMGKG-SFKY 56
Query: 338 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 511
+ + E + + I + ++ K + + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAV 113
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 34.7 bits (76), Expect = 0.001
Identities = 34/118 (28%), Positives = 55/118 (46%)
Frame = +2
Query: 158 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 337
M K++ N+ VI HVD GKST T L+ K G I R E +F + E + + K
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGI-DKRTIE-KF-EKEAQEMGKG-SFKY 56
Query: 338 TAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 511
+ + E + + I + ++ K + + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETAK-YYVTIIDAPGHRDFIKNMITGTSQADCAV 113
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 30.3 bits (65), Expect = 0.025
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = +2
Query: 416 EKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPI 595
E G + +D+PGH F S +TD + QT + A ++ I
Sbjct: 190 ESGERVTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKEQTLQSIEMAKDAKVPII 249
Query: 596 LFMNKMDR 619
+ +NK+D+
Sbjct: 250 VAINKIDK 257
Score = 29.5 bits (63), Expect = 0.043
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 185 MSVIAHVDHGKSTLTDSL 238
++++ HVDHGK+TL D+L
Sbjct: 148 VTIMGHVDHGKTTLLDAL 165
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 25.8 bits (54), Expect = 0.53
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 522 TVCLVCVYKPKQYCVRLLP 578
TV LVC+Y PK Y + P
Sbjct: 749 TVTLVCLYSPKIYIILFQP 767
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 25.8 bits (54), Expect = 0.53
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 522 TVCLVCVYKPKQYCVRLLP 578
TV LVC+Y PK Y + P
Sbjct: 839 TVTLVCLYSPKIYIILFQP 857
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 182 NMSVIAHVDHGKSTLTDSL 238
N+ I HV HGKST+ ++
Sbjct: 44 NIGTIGHVAHGKSTIVKAI 62
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 425 FLINLIDSPGHVDFSSEVTAALRVTDGAL 511
+ + +ID+PGH DF + D A+
Sbjct: 12 YYVTIIDAPGHRDFIKNMITGTSQADCAV 40
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 425 FLINLIDSPGHVDFSSEVTAALRVTDGAL 511
+ + +ID+PGH DF + D A+
Sbjct: 28 YYVTIIDAPGHRDFIKNMITGTSQADCAV 56
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 23.0 bits (47), Expect = 3.7
Identities = 8/31 (25%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +3
Query: 36 LKILPFSKRTPLLAYGSW-FNRTKI-INHLK 122
++ PF +++ ++ +GSW +N ++ + H+K
Sbjct: 162 VEYFPFDEQSCIMKFGSWTYNGAQVDLKHMK 192
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/21 (38%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +3
Query: 48 PFSKRTPLLAYGSW-FNRTKI 107
PF ++T ++ +GSW FN ++
Sbjct: 159 PFDQQTCIMKFGSWTFNGDQV 179
Score = 22.2 bits (45), Expect = 6.5
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -2
Query: 163 VHHPTDLVYREIHH 122
+HHP + R++HH
Sbjct: 400 LHHPNCKINRKVHH 413
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 4.9
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +3
Query: 36 LKILPFSKRTPLLAYGSW 89
++ PF ++T +L +GSW
Sbjct: 157 VEYFPFDEQTCVLKFGSW 174
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 8.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 344 ISMFFELEEKDLVFITNPDQREKSEKGFLI 433
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.8 bits (44), Expect = 8.6
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = +3
Query: 36 LKILPFSKRTPLLAYGSW 89
++ PF ++T ++ +GSW
Sbjct: 153 VEYFPFDEQTCVMKFGSW 170
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/26 (34%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
Frame = +3
Query: 24 YREFLKI----LPFSKRTPLLAYGSW 89
Y+ F +I PF ++T + +GSW
Sbjct: 141 YKSFCEIDVEYFPFDEQTCFMKFGSW 166
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.8 bits (44), Expect = 8.6
Identities = 6/18 (33%), Positives = 12/18 (66%)
Frame = +3
Query: 36 LKILPFSKRTPLLAYGSW 89
++ PF ++T + +GSW
Sbjct: 149 VRYFPFDQQTCFMKFGSW 166
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.8 bits (44), Expect = 8.6
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -3
Query: 528 TQSTTTRAP-SVTRSAAVTSEEKSTC 454
+ STTT +P + T+S V + STC
Sbjct: 324 SSSTTTTSPMTSTKSTIVRNHLNSTC 349
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 8.6
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 344 ISMFFELEEKDLVFITNPDQREKSEKGFLI 433
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,196
Number of Sequences: 438
Number of extensions: 5234
Number of successful extensions: 29
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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