Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_B08
(919 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 41 2e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 39 9e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.014
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 32 0.099
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.099
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.17
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.40
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.53
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 30 0.53
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.53
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.6
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 28 1.6
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 28 1.6
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 28 2.1
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 28 2.1
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 2.8
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 41.1 bits (92), Expect = 2e-04
Identities = 25/81 (30%), Positives = 26/81 (32%), Gaps = 6/81 (7%)
Frame = +2
Query: 686 PPXPPX------AGWXGGXXXXPPPPPXKNXKKXSPPXGXXPPPPXAXNPPGXPPXXTPG 847
PP PP A PPPPP + PP G PP P G
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAG 349
Query: 848 RXPXXXPXPXXXXTPPPXPPR 910
P P PPP PPR
Sbjct: 350 SIPL---PPQGRSAPPPPPPR 367
Score = 38.7 bits (86), Expect = 0.001
Identities = 35/116 (30%), Positives = 39/116 (33%), Gaps = 11/116 (9%)
Frame = +2
Query: 593 PPXPXGAXXXXXXXXXXXXXNXXSXTPPQXAPPXPPXAGWXG----GXXXXPPPPPXKNX 760
PP P + S PP PP AG G PPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP---- 366
Query: 761 KKXSPPXGXXPPP---PXAXNPPGXPPXXTPGRX-PXXXPXPXXXXT---PPPXPP 907
+ +P G PPP A + P PP PGR P P T P P PP
Sbjct: 367 -RSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421
Score = 35.9 bits (79), Expect = 0.008
Identities = 25/76 (32%), Positives = 26/76 (34%), Gaps = 3/76 (3%)
Frame = +2
Query: 686 PPXPPXAGWXGGXXXXPPPPPXKNXKKXSPPXGXXPPPPXAXNPPGXPPXXTPG---RXP 856
PP PP A G P PP N + S P PP PP PP P P
Sbjct: 388 PPAPPPA--IPGRSA-PALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Query: 857 XXXPXPXXXXTPPPXP 904
P P PP P
Sbjct: 445 AAPPLPPSAPIAPPLP 460
Score = 35.5 bits (78), Expect = 0.011
Identities = 23/80 (28%), Positives = 26/80 (32%), Gaps = 1/80 (1%)
Frame = +2
Query: 671 PPQXAPPXPPXAGWXGGXXXXPPPPPXKNXKKXSPPX-GXXPPPPXAXNPPGXPPXXTPG 847
P + AP PP PP P + +PP PP P PP P
Sbjct: 396 PGRSAPALPPLGN--ASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPL--PP 451
Query: 848 RXPXXXPXPXXXXTPPPXPP 907
P P P PP PP
Sbjct: 452 SAPIAPPLPAGMPAAPPLPP 471
Score = 34.7 bits (76), Expect = 0.019
Identities = 29/105 (27%), Positives = 32/105 (30%), Gaps = 1/105 (0%)
Frame = +2
Query: 593 PPXPXGAXXXXXXXXXXXXXNXX-SXTPPQXAPPXPPXAGWXGGXXXXPPPPPXKNXKKX 769
PP P A N + TPP PP P + PP
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSA----------PPSLPPSAPP 437
Query: 770 SPPXGXXPPPPXAXNPPGXPPXXTPGRXPXXXPXPXXXXTPPPXP 904
S P G PP + P PP P P P P PPP P
Sbjct: 438 SLPMGAPAAPPLPPSAPIAPP--LPAGMPAAPPLPPAAPAPPPAP 480
Score = 34.3 bits (75), Expect = 0.025
Identities = 24/84 (28%), Positives = 25/84 (29%), Gaps = 5/84 (5%)
Frame = +2
Query: 671 PPQXAPPXPPXAGWXGGXXXXPPPPPXKNXKKXSPPXGXXPP-PPXAXNP----PGXPPX 835
PP PP PP PP N SPP P P + NP PP
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPL 292
Query: 836 XTPGRXPXXXPXPXXXXTPPPXPP 907
P PPP PP
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPP 316
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/59 (28%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +2
Query: 674 PQXAPPXPPXAGWXGGXXXXPPPPPXKNXKKXSP--PXGXXPPPPXAXNPPGXPPXXTP 844
P APP P + P PP +P P G PP P PP P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 683 APPXPPXAGWXGGXXXXPPPPPXKNXKKXSPPXGXXPPPPXAXNP 817
APP PP A PP P PP PPP A P
Sbjct: 446 APPLPPSA------PIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 25.4 bits (53), Expect(2) = 1.4
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +2
Query: 800 PXAXNPPGXPPXXTPGRXPXXXPXPXXXXTPPPXPP 907
P + + P PP R P P PPP PP
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVP-SLSAPAPPPIPP 258
Score = 21.4 bits (43), Expect(2) = 1.4
Identities = 10/35 (28%), Positives = 12/35 (34%)
Frame = +2
Query: 653 NXXSXTPPQXAPPXPPXAGWXGGXXXXPPPPPXKN 757
N + PP APP P + P P N
Sbjct: 152 NNSNIQPPSAAPPVPGKENYNAVGSKSPNEPELLN 186
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 39.1 bits (87), Expect = 9e-04
Identities = 26/82 (31%), Positives = 28/82 (34%), Gaps = 1/82 (1%)
Frame = +2
Query: 662 SXTPPQXAPPX-PPXAGWXGGXXXXPPPPPXKNXKKXSPPXGXXPPPPXAXNPPGXPPXX 838
S PP P PP G PPP P + + S P PP A P G PP
Sbjct: 1038 STAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPA--PSGIPPVP 1095
Query: 839 TPGRXPXXXPXPXXXXTPPPXP 904
P P P P P P
Sbjct: 1096 KPSVAAPPVPKPSVAVPPVPAP 1117
Score = 34.7 bits (76), Expect = 0.019
Identities = 25/79 (31%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
Frame = +2
Query: 671 PPQXAPPXP-PXAGWXGGXXXXPPPPPXKNXKKXSPPXGXXPPPPXAXNPPGXPPXXTPG 847
P PP P P AG P PPP + P G P PP + PP TP
Sbjct: 1174 PSSGIPPVPKPAAG------VPPVPPPSEAPPVPKPSVGVPPVPPPST----APPVPTPS 1223
Query: 848 RXPXXXPXPXXXXTPPPXP 904
P P P P P
Sbjct: 1224 AGLPPVPVPTAKAPPVPAP 1242
Score = 32.3 bits (70), Expect = 0.099
Identities = 24/84 (28%), Positives = 25/84 (29%), Gaps = 6/84 (7%)
Frame = +2
Query: 671 PPQXAPPXPPXAGWXGGXXXXPPPPPXKNXKKXSPPXGXXPPPPXAXNPP------GXPP 832
PP AP P P P P G P PP + PP G PP
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 833 XXTPGRXPXXXPXPXXXXTPPPXP 904
P P P P P P P
Sbjct: 1210 VPPPSTAP-PVPTPSAGLPPVPVP 1232
Score = 31.5 bits (68), Expect = 0.17
Identities = 24/77 (31%), Positives = 26/77 (33%), Gaps = 1/77 (1%)
Frame = +2
Query: 671 PPQXAPPXPPXAGWXGGXXXXPPPPPXKNXKKXSPPXGXXP-PPPXAXNPPGXPPXXTPG 847
P APP P +G P P +P G P P P A PP PP P
Sbjct: 1145 PSVAAPPVPAPSG-----APPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP- 1198
Query: 848 RXPXXXPXPXXXXTPPP 898
P P PPP
Sbjct: 1199 --PVPKPSVGVPPVPPP 1213
Score = 30.7 bits (66), Expect = 0.30
Identities = 22/77 (28%), Positives = 24/77 (31%)
Frame = +2
Query: 674 PQXAPPXPPXAGWXGGXXXXPPPPPXKNXKKXSPPXGXXPPPPXAXNPPGXPPXXTPGRX 853
P APP P + PP P + P PP A P G PP P
Sbjct: 1117 PSGAPPVPKPS-------VAAPPVPVPSGAPPVPKPSVAAPPVPA--PSGAPPVPKPSVA 1167
Query: 854 PXXXPXPXXXXTPPPXP 904
P P P P P
Sbjct: 1168 APPVPAPSSGIPPVPKP 1184
Score = 29.1 bits (62), Expect = 0.92
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 1/77 (1%)
Frame = +2
Query: 671 PPQXAPPXPPXAGWXGGXXXXPPPPPXKNXKKXSPPXGXXP-PPPXAXNPPGXPPXXTPG 847
P APP P +G P P P P G P P P PP P + G
Sbjct: 1126 PSVAAPPVPVPSG------APPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP--VPAPSSG 1177
Query: 848 RXPXXXPXPXXXXTPPP 898
P P PPP
Sbjct: 1178 IPPVPKPAAGVPPVPPP 1194
Score = 27.9 bits (59), Expect = 2.1
Identities = 25/85 (29%), Positives = 27/85 (31%), Gaps = 7/85 (8%)
Frame = +2
Query: 671 PPQXAPPXPPXAGWXGGXXXXP---PPPPXKNXKKXSP---PXGXXPPPPXAXNPPGXP- 829
PP+ PP P + P PP K K P P PP P P P
Sbjct: 986 PPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPI 1045
Query: 830 PXXTPGRXPXXXPXPXXXXTPPPXP 904
P TP P PPP P
Sbjct: 1046 PTSTP---PVPKSSSGAPSAPPPVP 1067
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.1 bits (77), Expect = 0.014
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = +2
Query: 737 PPPPXKNXKKXSPPXGXXPPPPXAXNPPGXPPXXTPGRXPXXXPXPXXXXTPPPXPP 907
PPPP +P P PP A G PP P P P PPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP-----PPPPPP 783
Score = 34.3 bits (75), Expect = 0.025
Identities = 22/51 (43%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 674 PQXAP-PXPPXAGWXGGXXXXPPPPPXKNXKKXSPPXGXXPPPPXAXNPPG 823
P AP P PP A GG PPPPP PP PPPP A + G
Sbjct: 744 PAPAPIPVPPPAPIMGGPPP-PPPPPGVAGAGPPPP----PPPPPAVSAGG 789
Score = 29.9 bits (64), Expect = 0.53
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 683 APPXPPXAGWXGGXXXXPPPPPXKNXKKXSPPXGXXPPPPXAXNPPGXPP 832
+PP PP A P P P PP PP PP PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 29.9 bits (64), Expect = 0.53
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 685 PPQXPPGRXXGGXXXXPPPPP 747
PP PPG G PPPPP
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPP 783
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 671 PPQXAPPXPPXAGWXGGXXXXPPPPP 748
P PP PP G PPPPP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPP 781
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.3 bits (70), Expect = 0.099
Identities = 20/67 (29%), Positives = 22/67 (32%)
Frame = +2
Query: 674 PQXAPPXPPXAGWXGGXXXXPPPPPXKNXKKXSPPXGXXPPPPXAXNPPGXPPXXTPGRX 853
P PP P + PPPP + PP PP P PP PP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSV----PPPPSAPPMPAG--PPSAPPPPLPASS 1739
Query: 854 PXXXPXP 874
P P
Sbjct: 1740 APSVPNP 1746
Score = 31.9 bits (69), Expect = 0.13
Identities = 20/77 (25%), Positives = 22/77 (28%)
Frame = +2
Query: 674 PQXAPPXPPXAGWXGGXXXXPPPPPXKNXKKXSPPXGXXPPPPXAXNPPGXPPXXTPGRX 853
PQ PP P A P P +P PP P + PP P P
Sbjct: 1444 PQVVPPAPMHA-----VAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMI 1498
Query: 854 PXXXPXPXXXXTPPPXP 904
P P P P
Sbjct: 1499 PSVAQQPPSSVAPATAP 1515
Score = 29.1 bits (62), Expect = 0.92
Identities = 16/59 (27%), Positives = 19/59 (32%), Gaps = 2/59 (3%)
Frame = +2
Query: 734 PPPPPXKNXKKXSPPX--GXXPPPPXAXNPPGXPPXXTPGRXPXXXPXPXXXXTPPPXP 904
P P + +PP PPPP PP P P P P + P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/66 (24%), Positives = 19/66 (28%)
Frame = +2
Query: 581 GGXXPPXPXGAXXXXXXXXXXXXXNXXSXTPPQXAPPXPPXAGWXGGXXXXPPPPPXKNX 760
GG P P + + PP + P PP A PPPP
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPAS 1738
Query: 761 KKXSPP 778
S P
Sbjct: 1739 SAPSVP 1744
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.3 bits (70), Expect = 0.099
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +2
Query: 671 PPQXAPPXPPXAGWXGGXXXXPPPPP--XKNXKKXSP 775
PP PP PP G+ PPPPP K K +P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/25 (44%), Positives = 11/25 (44%), Gaps = 1/25 (4%)
Frame = +2
Query: 773 PPXGXX-PPPPXAXNPPGXPPXXTP 844
PP PPPP PP PP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 734 PPPPPXKNXKKXSPPXGXXPPPP 802
PPPPP + PP PPPP
Sbjct: 10 PPPPPPPGFE---PPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 719 GXXXXPPPPPXKNXKKXSPPXGXXPPPP 802
G PPPPP PP PPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPP----PPPP 30
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.5 bits (68), Expect = 0.17
Identities = 27/79 (34%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
Frame = -2
Query: 906 GGXGGGVXXXX-GXGXXXGXRPGVXXGGXPGGFXAXGGGGXXPXGGEXFFXFFXGGGGGX 730
GG GGG G G G G GG GGG GG F GG GG
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
Query: 729 XXXPPXXPAXGGLGGAXXG 673
P GG GG G
Sbjct: 251 LGGFGGGP--GGFGGGPGG 267
Score = 30.7 bits (66), Expect = 0.30
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -2
Query: 831 GGXPGGFXAXGGGGXXPXGGEXFFXFFXGGGGGXXXXPPXXPAXGGLGGAXXG 673
G GGF GGG P G F F G GG GG GG G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG 236
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.3 bits (65), Expect = 0.40
Identities = 30/79 (37%), Positives = 31/79 (39%)
Frame = -2
Query: 909 RGGXGGGVXXXXGXGXXXGXRPGVXXGGXPGGFXAXGGGGXXPXGGEXFFXFFXGGGGGX 730
RGG GG G G G R G GG GG A GGG GG GG GG
Sbjct: 8 RGGRGGS---RGGRGGFNGGRGG--FGGGRGG--ARGGGRGGARGGRGGRGGARGGRGG- 59
Query: 729 XXXPPXXPAXGGLGGAXXG 673
+ GG GGA G
Sbjct: 60 --------SSGGRGGAKGG 70
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.9 bits (64), Expect = 0.53
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 2/77 (2%)
Frame = +2
Query: 671 PPQXAPPXPPXAGWXGGXXXXPPPPPXKNXKKXS--PPXGXXPPPPXAXNPPGXPPXXTP 844
PP APP P PPP P S PP PPP P P P
Sbjct: 139 PPTSAPPRPSI----------PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Query: 845 GRXPXXXPXPXXXXTPP 895
P P PP
Sbjct: 189 SLPSAVPPMPPKVPPPP 205
Score = 29.5 bits (63), Expect = 0.70
Identities = 22/84 (26%), Positives = 27/84 (32%), Gaps = 1/84 (1%)
Frame = +2
Query: 662 SXTPPQXAPPXPPXAGWXGGXXXXPPPP-PXKNXKKXSPPXGXXPPPPXAXNPPGXPPXX 838
S PP P P + P P P + P PP P + PP P
Sbjct: 121 SAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP--A 178
Query: 839 TPGRXPXXXPXPXXXXTPPPXPPR 910
P + P P PP PP+
Sbjct: 179 APVKSP--PSAPSLPSAVPPMPPK 200
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 29.9 bits (64), Expect = 0.53
Identities = 19/74 (25%), Positives = 21/74 (28%)
Frame = +2
Query: 686 PPXPPXAGWXGGXXXXPPPPPXKNXKKXSPPXGXXPPPPXAXNPPGXPPXXTPGRXPXXX 865
PP PP A PPP K + PP P P P TP
Sbjct: 908 PPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPV-QQPSHPNPYTPVAPQSPV 966
Query: 866 PXPXXXXTPPPXPP 907
+ P PP
Sbjct: 967 AAASRISSSPNMPP 980
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.9 bits (64), Expect = 0.53
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -2
Query: 909 RGGXGGGVXXXXGXGXXXGXRPGVXXGGXPGGF 811
RGG GGG G G G R G GG GGF
Sbjct: 159 RGGFGGGSRGGFGGGSRGGSRGG-FRGGSRGGF 190
Score = 28.7 bits (61), Expect = 1.2
Identities = 20/62 (32%), Positives = 21/62 (33%)
Frame = -2
Query: 855 GXRPGVXXGGXPGGFXAXGGGGXXPXGGEXFFXFFXGGGGGXXXXPPXXPAXGGLGGAXX 676
G R G G GGF GG GG F GG G + GG G
Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFGGNS-RGGFGGGSRGGFGGGSRGGSRGGFRGGSR 187
Query: 675 GG 670
GG
Sbjct: 188 GG 189
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/85 (25%), Positives = 25/85 (29%), Gaps = 8/85 (9%)
Frame = +2
Query: 677 QXAPPXPPXAGWXGGXXXXPPPPPXKNXKKXSPPXGXXPPPPXAXNP--PGXPPXXTPGR 850
Q A P + G P PP K+ P PPPP P P R
Sbjct: 202 QAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSR 261
Query: 851 ------XPXXXPXPXXXXTPPPXPP 907
P P + PP PP
Sbjct: 262 NVNNLGSQVNIPPPPATPSQPPRPP 286
Score = 27.9 bits (59), Expect = 2.1
Identities = 19/78 (24%), Positives = 21/78 (26%)
Frame = +2
Query: 671 PPQXAPPXPPXAGWXGGXXXXPPPPPXKNXKKXSPPXGXXPPPPXAXNPPGXPPXXTPGR 850
P PP PP P P +N PPPP + P PP R
Sbjct: 234 PLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNI-PPPPATPSQPPRPPTNASTR 292
Query: 851 XPXXXPXPXXXXTPPPXP 904
PP P
Sbjct: 293 STGTSSSMAHSYDSPPSP 310
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 791 PPPPXAXNPPGXPPXXTPGRXPXXXPXPXXXXTPPPXPPR 910
P A N P P TP P P P PPP P R
Sbjct: 712 PMGTGAVNSPAIKPQVTPA-PPTPAPTPAVKHHPPPPPVR 750
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 716 GGXXXXPPPPPXKNXKKXSPPXGXXPPPPXAXNPP 820
GG PPPPP SP P P N P
Sbjct: 284 GGAPLVPPPPPGMVMASPSPAAATIPGAPVMPNIP 318
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 734 PPPPPXKNXKKXSPPXGXXPPPPXAXNPPGXPPXXTP 844
PPPPP +N PP PP PP P
Sbjct: 207 PPPPPQQNY----PPAASSSAPPMQYQQTAYPPQQAP 239
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 27.9 bits (59), Expect = 2.1
Identities = 23/69 (33%), Positives = 24/69 (34%), Gaps = 5/69 (7%)
Frame = -2
Query: 906 GGXGGGVXXXXGXGXXXGXRPG----VXXGGXPGGFXA-XGGGGXXPXGGEXFFXFFXGG 742
GG GGG+ G G GG PGGF GGGG P F
Sbjct: 137 GGMGGGMGGMGGMDDDMDMDGGFGTRTRGGGMPGGFANMFGGGGAGPHARRSHPSF---- 192
Query: 741 GGGXXXXPP 715
GG PP
Sbjct: 193 GGSRPSQPP 201
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 734 PPPPPXKNXKKXSPPXGXXPPPPXAXNPPGXPP 832
PPPPP K PP P + PP PP
Sbjct: 1882 PPPPPPMALPKAGPPSA----APTSALPPAGPP 1910
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,001,480
Number of Sequences: 5004
Number of extensions: 29367
Number of successful extensions: 329
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 466510270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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