BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_A21
(813 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0192 + 1302358-1302781,1303330-1303394,1303794-1303856,130... 34 0.15
12_01_0292 + 2193309-2193338,2193565-2193640,2193744-2195203,219... 33 0.20
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 33 0.36
12_02_0507 + 19810446-19811048,19811220-19811466,19811590-198121... 31 0.82
08_01_0973 + 9803917-9804519,9804691-9805596,9805908-9807149 31 0.82
06_03_0228 - 18439659-18440900,18441212-18441736,18441813-184421... 31 0.82
04_03_0328 + 14440877-14441479,14441650-14441955,14442032-14442637 31 0.82
04_03_0101 - 11242252-11243295,11243607-11244131,11244208-112445... 31 0.82
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 1.3
11_06_0732 - 26740718-26741704,26741876-26742478 31 1.4
10_02_0149 - 5873273-5874514,5874826-5875731,5875903-5876505 31 1.4
06_01_1011 + 7879283-7879885,7880057-7880962,7881274-7882515 31 1.4
05_03_0226 - 10645036-10646001,10646313-10646828,10646905-106472... 31 1.4
01_01_0083 + 631196-631675 31 1.4
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 1.9
12_01_0752 - 6798938-6799312,6799628-6799768,6800257-6800325,680... 30 2.5
03_03_0212 + 15479850-15479921,15479965-15480083,15480175-154802... 30 2.5
01_07_0082 - 40965947-40967023 30 2.5
01_06_0046 + 25943183-25943590 30 2.5
05_01_0180 + 1268129-1268237,1268382-1268731,1268903-1269808,127... 29 3.3
07_01_0974 + 8211602-8212051 29 4.4
04_03_0383 + 15179587-15180162,15180334-15181149,15181548-15182789 29 4.4
01_03_0005 + 11568545-11569119,11569179-11569191 29 4.4
12_02_0299 - 17051570-17052474,17053542-17053755 29 5.8
11_01_0638 + 5106962-5107553,5108107-5108303,5108955-5110196 29 5.8
11_01_0348 - 2607315-2607424,2608634-2609030 29 5.8
06_01_0428 + 3055163-3055573 29 5.8
06_01_0427 - 3054204-3054614 29 5.8
06_01_0423 - 3039527-3039937 29 5.8
06_01_0217 - 1644696-1645034,1645143-1645214 29 5.8
05_04_0449 - 21355439-21355849 29 5.8
04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392 29 5.8
04_03_0909 + 20748653-20749063 29 5.8
01_06_1456 + 37507156-37507566 29 5.8
11_01_0288 + 2151552-2151581,2151818-2151893,2152019-2153460 28 7.7
10_08_0161 + 15312986-15313160,15313250-15313557,15313676-153137... 28 7.7
03_03_0038 + 13984525-13984917,13985351-13985429,13985535-139856... 28 7.7
>02_01_0192 +
1302358-1302781,1303330-1303394,1303794-1303856,
1304224-1304232
Length = 186
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -1
Query: 621 GGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXXPPP 511
G G KKK K G G K + GG K++ PPP
Sbjct: 37 GSGSKKKARKSKGAGNKGEASGGGGGKGKEKALEPPP 73
>12_01_0292 +
2193309-2193338,2193565-2193640,2193744-2195203,
2195479-2195505,2195794-2196024,2196523-2196692,
2197278-2197421,2198036-2198083,2198503-2198566
Length = 749
Score = 33.5 bits (73), Expect = 0.20
Identities = 19/42 (45%), Positives = 19/42 (45%), Gaps = 6/42 (14%)
Frame = -1
Query: 639 PPPXXGGGGXKKKXXKXXGGG------XKXKXXXXXGGGXKK 532
PPP GGGG KK K GGG K GGG KK
Sbjct: 242 PPPNAGGGGDKKGGGKKGGGGNEIPVQIKGNANNAAGGGGKK 283
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 32.7 bits (71), Expect = 0.36
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 542 PPPXXXXXFXXXPPPXXXXFFFFXPPPP 625
PPP F PPP FF PPPP
Sbjct: 55 PPPQVIRVFAAAPPPPPAAFFAAVPPPP 82
>12_02_0507 +
19810446-19811048,19811220-19811466,19811590-19812125,
19812397-19813620
Length = 869
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 639 PPPXXGGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXXPP 514
PPP GGG + + + G G G G RG PP
Sbjct: 95 PPPAAGGGRGRSRGGRGGGRGRGMSLTNGAGSGRGMRGFVPP 136
>08_01_0973 + 9803917-9804519,9804691-9805596,9805908-9807149
Length = 916
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 639 PPPXXGGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXXPP 514
PPP GGG + + + G G G G RG PP
Sbjct: 95 PPPAAGGGRGRSRGGRGGGRGRGRSLTNGAGSGRGMRGFVPP 136
>06_03_0228 -
18439659-18440900,18441212-18441736,18441813-18442118,
18442290-18442877
Length = 886
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 639 PPPXXGGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXXPP 514
PPP GGG + + + G G G G RG PP
Sbjct: 90 PPPAAGGGRGRSRGGRGGGRGRGRSLTNGAGSGRGMRGFVPP 131
>04_03_0328 + 14440877-14441479,14441650-14441955,14442032-14442637
Length = 504
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 639 PPPXXGGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXXPP 514
PPP GGG + + + G G G G RG PP
Sbjct: 95 PPPAAGGGRGRSRGGRGGGRGRGRSLTNGAGSGRGMRGFVPP 136
>04_03_0101 -
11242252-11243295,11243607-11244131,11244208-11244513,
11244692-11245231
Length = 804
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 639 PPPXXGGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXXPP 514
PPP GGG + + + G G G G RG PP
Sbjct: 74 PPPAAGGGRGRSRGGRGGGRGRGMSLTNGAGSGRGMRGFVPP 115
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = -3
Query: 517 PPPXPPXXKNXXXXKXXPPXXXXGXXXXFFSPPPXKKXP 401
PPP PP + PP G F +PPP P
Sbjct: 634 PPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPP 672
Score = 28.3 bits (60), Expect(2) = 1.3
Identities = 18/67 (26%), Positives = 20/67 (29%)
Frame = -1
Query: 702 PPPPPFXXXXXXXXXXXXXXXPPPXXGGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGX 523
PPPPP PPP G G K + G +G
Sbjct: 634 PPPPP----PPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGP 689
Query: 522 XPPPPXP 502
PPPP P
Sbjct: 690 PPPPPPP 696
Score = 21.0 bits (42), Expect(2) = 1.3
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -1
Query: 519 PPPPXPPXKK 490
PPPP PP +
Sbjct: 714 PPPPPPPANR 723
>11_06_0732 - 26740718-26741704,26741876-26742478
Length = 529
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = -1
Query: 639 PPPXXGGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXXPP 514
PPP GGG + + G G G G RG PP
Sbjct: 95 PPPAAGGGRGSSRGGRGGGRGRGRSLTNGAGSGRGMRGFVPP 136
>10_02_0149 - 5873273-5874514,5874826-5875731,5875903-5876505
Length = 916
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = -1
Query: 639 PPPXXGGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXXPP 514
PPP GGG + + G G G G RG PP
Sbjct: 95 PPPAAGGGRGSSRGGRGGGRGRGRSLTNGAGSGRGMRGFVPP 136
>06_01_1011 + 7879283-7879885,7880057-7880962,7881274-7882515
Length = 916
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = -1
Query: 639 PPPXXGGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXXPP 514
PPP GGG + + G G G G RG PP
Sbjct: 95 PPPAAGGGRGSSRGGRGGGRGRGRSLTNGAGSGRGMRGFVPP 136
>05_03_0226 -
10645036-10646001,10646313-10646828,10646905-10647210,
10647382-10647984
Length = 796
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = -1
Query: 639 PPPXXGGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXXPP 514
PPP GGG + + G G G G RG PP
Sbjct: 95 PPPAAGGGRGSSRGGRGGGRGRGRSLTNGAGSGRGMRGFVPP 136
>01_01_0083 + 631196-631675
Length = 159
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/66 (31%), Positives = 21/66 (31%)
Frame = -1
Query: 699 PPPPFXXXXXXXXXXXXXXXPPPXXGGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXX 520
PPP PPP GGGG GGG GGG
Sbjct: 58 PPPSSSSSNTPPSSSSYWNYPPPQGGGGGYIPYYQPPAGGG---------GGGGGFNYPA 108
Query: 519 PPPPXP 502
PPPP P
Sbjct: 109 PPPPNP 114
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = +1
Query: 526 PPF--FXPPPXXXXXFXFXPPPXXFXXFFFXPPPPXXGG 636
PP + PPP + PPP F PPPP G
Sbjct: 23 PPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPG 61
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 517 GXXPPFFXPPPXXXXXFXFXPPPXXFXXFFFXPPPP 624
G PPF PPP PPP F F P PP
Sbjct: 46 GAPPPFLAPPPPPPP----GPPPPHQPQFNFGPGPP 77
>12_01_0752 -
6798938-6799312,6799628-6799768,6800257-6800325,
6800407-6800454,6801740-6801836,6801922-6802001,
6802099-6802170,6802335-6802429,6802853-6802934,
6805476-6805853
Length = 478
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 529 PFFXPPPXXXXXFXFXPPPXXFXXFFFXPPPP 624
P PPP F PPP FF PPPP
Sbjct: 42 PVVPPPPPVIRVFAAAPPPP--RAAFFAPPPP 71
>03_03_0212 +
15479850-15479921,15479965-15480083,15480175-15480265,
15480363-15480533
Length = 150
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + KS
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKS 25
>01_07_0082 - 40965947-40967023
Length = 358
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 541 PPPXXXXXFXFXPPPXXFXXFFFXPPPPXXGGGG 642
PPP + PPP + + PPPP G GG
Sbjct: 256 PPPQYGYGYPAQPPPPQ-AGYGYPPPPPQAGYGG 288
>01_06_0046 + 25943183-25943590
Length = 135
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 526 PPFFXPPPXXXXXFXFXPPPXXFXXFFFXPPPP 624
PP PPP + + PPP + + PPPP
Sbjct: 52 PPALPPPPPY---YYYSPPPPAYYPGSYCPPPP 81
>05_01_0180 +
1268129-1268237,1268382-1268731,1268903-1269808,
1270120-1271361
Length = 868
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = -1
Query: 639 PPPXXGGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXXPP 514
PPP GGG + + G G G G RG PP
Sbjct: 47 PPPAAGGGRGSSRGGRGGGRGRGRSLTNGAGFGRGMRGFVPP 88
>07_01_0974 + 8211602-8212051
Length = 149
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = +2
Query: 578 PPPXXXXFFFFXPPPP--XXGGG 640
PPP F+++ PPPP GGG
Sbjct: 37 PPPLVQQFYYYSPPPPSSPVGGG 59
>04_03_0383 + 15179587-15180162,15180334-15181149,15181548-15182789
Length = 877
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = -1
Query: 639 PPPXXGGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXXPP 514
PPP GGG + + + G G G RG PP
Sbjct: 86 PPPAAGGGRGRSRGGRGGGRGRGRSLTNGAGSSRGMRGFVPP 127
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 500 GGXGGGGXXPLFFXPPPXXXXXFXXXPPPXXXXFFFFXPPPPXXGGG 640
GG GGGG ++ PPP ++ PPP GGG
Sbjct: 79 GGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYY---PPPTGGGGG 122
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 6/48 (12%)
Frame = +1
Query: 499 GGXXGGGXXPP------FFXPPPXXXXXFXFXPPPXXFXXFFFXPPPP 624
GG GGG PP F PP F P F F PPP
Sbjct: 189 GGTGGGGDVPPAALNTSLFYCPPWPWPPIPFCTPRPWFPPIPFLTPPP 236
>11_01_0638 + 5106962-5107553,5108107-5108303,5108955-5110196
Length = 676
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = -1
Query: 639 PPPXXGGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXXPP 514
PPP GGG + + + G G G G G PP
Sbjct: 95 PPPAAGGGRGRSRGGRGGGRGRGRSLTNSAGSGRGMGGFVPP 136
>11_01_0348 - 2607315-2607424,2608634-2609030
Length = 168
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>06_01_0428 + 3055163-3055573
Length = 136
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>06_01_0427 - 3054204-3054614
Length = 136
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>06_01_0423 - 3039527-3039937
Length = 136
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>06_01_0217 - 1644696-1645034,1645143-1645214
Length = 136
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>05_04_0449 - 21355439-21355849
Length = 136
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>04_04_0062 + 22437653-22437724,22437866-22437943,22438222-22438392
Length = 106
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>04_03_0909 + 20748653-20749063
Length = 136
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>01_06_1456 + 37507156-37507566
Length = 136
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>11_01_0288 + 2151552-2151581,2151818-2151893,2152019-2153460
Length = 515
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 639 PPPXXGGGGXKKKXXKXXGGGXKXKXXXXXGGG 541
PPP GGGG KK G G K GGG
Sbjct: 244 PPPNAGGGGDKKGGNNGGGAGNGGK---KGGGG 273
>10_08_0161 +
15312986-15313160,15313250-15313557,15313676-15313754,
15313856-15314373
Length = 359
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -1
Query: 624 GGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKR 529
GGG KK + GGG K GGG K +
Sbjct: 120 GGGDDKKAEKEKGGGGGDKKAEKEKGGGDKPK 151
>03_03_0038 +
13984525-13984917,13985351-13985429,13985535-13985628,
13985712-13985844
Length = 232
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/50 (30%), Positives = 19/50 (38%)
Frame = -1
Query: 639 PPPXXGGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXXPPPPXPPXKK 490
PPP GG KK K ++R PPPP PP ++
Sbjct: 41 PPPPQLRGGETKKKKKPDARTAAEAAQGLQRHEVERRKKPPPPPPPPKQE 90
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,451,565
Number of Sequences: 37544
Number of extensions: 516752
Number of successful extensions: 3156
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2678
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -