Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_A21
(813 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.3
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 3.0
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 4.0
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 4.0
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 4.0
Z98866-6|CAB11546.1| 136|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z93388-9|CAB07653.1| 136|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z83245-7|CAB05834.1| 136|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z83245-3|CAB05833.1| 136|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z83245-2|CAB05831.1| 136|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z82271-1|CAB05209.1| 136|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z81495-3|CAB04057.1| 136|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z74476-1|CAA98963.1| 136|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z73102-11|CAA97411.1| 136|Caenorhabditis elegans Hypothetical p... 29 5.2
Z68336-2|CAA92733.1| 136|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.2
X15634-2|CAA33644.1| 136|Caenorhabditis elegans Histone protein... 29 5.2
U64845-9|AAC48033.1| 136|Caenorhabditis elegans Histone protein... 29 5.2
U64843-9|AAF98226.1| 136|Caenorhabditis elegans Histone protein... 29 5.2
U64843-4|AAF98231.1| 136|Caenorhabditis elegans Histone protein... 29 5.2
U58750-10|AAB00650.1| 136|Caenorhabditis elegans Histone protei... 29 5.2
U28732-2|AAB04902.1| 136|Caenorhabditis elegans Histone protein... 29 5.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.2
AF304122-1|AAG50235.1| 136|Caenorhabditis elegans histone H3 pr... 29 5.2
AF047656-3|AAC05102.1| 136|Caenorhabditis elegans Histone prote... 29 5.2
AC024696-4|AAK84514.1| 136|Caenorhabditis elegans Histone prote... 29 5.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 6.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 6.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 6.9
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 9.1
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 31.1 bits (67), Expect = 0.98
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +1
Query: 529 PFFXPPPXXXXXFXFXPPPXXFXXFFFXPPPPXXGGGG 642
P+ PPP + PPP + PPPP G G
Sbjct: 36 PYGAPPPPVGAGVGYAPPPPRPYGATYAPPPPMGIGAG 73
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 585 GGGXKXKXXXXXGGGXKKRGXXPPPPXPP 499
G G K G G +R PPPP PP
Sbjct: 513 GNGRPMKPPSSSGSGSNRRSGPPPPPPPP 541
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -1
Query: 624 GGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXXPPPPXPP 499
GGGG GG GGG PPPP PP
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -1
Query: 624 GGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXXPPPPXPP 499
GGGG GG GGG PPPP PP
Sbjct: 267 GGGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = -1
Query: 639 PPPXXGGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXXPPPPXPP 499
PPP G G + GG GG + G PP P PP
Sbjct: 1560 PPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPP 1606
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -1
Query: 624 GGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXXPPPPXPP 499
GGGG GGG GGG G PPP PP
Sbjct: 75 GGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPP 116
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -1
Query: 633 PXXGGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXXPPPPXP 502
P GGGG GGG GGG G PPPP P
Sbjct: 21 PSGGGGGGGGGCGGGCGGGG-----GCGGGGGCGGGCAPPPPPP 59
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = +2
Query: 500 GGXGGGGXXPL--FFXPPPXXXXXFXXXPPPXXXXFFFFXPPPPXXGGG 640
GG GGGG P PPP PPP PPPP G G
Sbjct: 25 GGGGGGGCAPAAPACAPPPPPMCGCAPPPPP--------PPPPPMCGCG 65
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = -1
Query: 636 PPXXGGGGXK-KKXXKXXGGGXKXKXXXXXGGGXKKRGXXPPPPXPP 499
P GG G K K GGG GG G PPPP PP
Sbjct: 636 PGARGGAGAKANKGWYGSGGGSSMPMPVPPPGGLG--GFMPPPPPPP 680
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = -1
Query: 636 PPXXGGGGXK-KKXXKXXGGGXKXKXXXXXGGGXKKRGXXPPPPXPP 499
P GG G K K GGG GG G PPPP PP
Sbjct: 636 PGARGGAGAKANKGWYGSGGGSSMPMPVPPPGGLG--GFMPPPPPPP 680
>Z98866-6|CAB11546.1| 136|Caenorhabditis elegans Hypothetical
protein Y49E10.6 protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>Z93388-9|CAB07653.1| 136|Caenorhabditis elegans Hypothetical
protein T10C6.13 protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>Z83245-7|CAB05834.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.7 protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>Z83245-3|CAB05833.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.3 protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>Z83245-2|CAB05831.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.2 protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>Z82271-1|CAB05209.1| 136|Caenorhabditis elegans Hypothetical
protein F54E12.1 protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>Z81495-3|CAB04057.1| 136|Caenorhabditis elegans Hypothetical
protein F08G2.3 protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>Z74476-1|CAA98963.1| 136|Caenorhabditis elegans Hypothetical
protein W05B10.1 protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKALATKA 25
>Z73102-11|CAA97411.1| 136|Caenorhabditis elegans Hypothetical
protein B0035.10 protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>Z68336-2|CAA92733.1| 136|Caenorhabditis elegans Hypothetical
protein F22B3.2 protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = -1
Query: 624 GGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRGXXPPPPXPP 499
GG GG + GG + +G PPPP PP
Sbjct: 62 GGNNYNNGPPPFDGGYNRPYGGGGGGGYGRPQGYVPPPPPPP 103
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/39 (28%), Positives = 14/39 (35%)
Frame = -3
Query: 517 PPPXPPXXKNXXXXKXXPPXXXXGXXXXFFSPPPXKKXP 401
PPP PP + PP + PPP + P
Sbjct: 334 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 372
>X15634-2|CAA33644.1| 136|Caenorhabditis elegans Histone protein
protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>U64845-9|AAC48033.1| 136|Caenorhabditis elegans Histone protein 6
protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>U64843-9|AAF98226.1| 136|Caenorhabditis elegans Histone protein 17
protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>U64843-4|AAF98231.1| 136|Caenorhabditis elegans Histone protein 27
protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>U58750-10|AAB00650.1| 136|Caenorhabditis elegans Histone protein
59 protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>U28732-2|AAB04902.1| 136|Caenorhabditis elegans Histone protein 71
protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/39 (28%), Positives = 14/39 (35%)
Frame = -3
Query: 517 PPPXPPXXKNXXXXKXXPPXXXXGXXXXFFSPPPXKKXP 401
PPP PP + PP + PPP + P
Sbjct: 344 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPP 382
>AF304122-1|AAG50235.1| 136|Caenorhabditis elegans histone H3
protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>AF047656-3|AAC05102.1| 136|Caenorhabditis elegans Histone protein
32 protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>AC024696-4|AAK84514.1| 136|Caenorhabditis elegans Histone protein
49 protein.
Length = 136
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 92 LARTKQTARKXXXGXXPGKXIXXKS 166
+ARTKQTARK G P K + K+
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKA 25
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/69 (24%), Positives = 18/69 (26%)
Frame = -1
Query: 705 GPPPPPFXXXXXXXXXXXXXXXPPPXXGGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRG 526
G PPPP PPP G + G R
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 294
Query: 525 XXPPPPXPP 499
PPPP PP
Sbjct: 295 GSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/69 (24%), Positives = 18/69 (26%)
Frame = -1
Query: 705 GPPPPPFXXXXXXXXXXXXXXXPPPXXGGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRG 526
G PPPP PPP G + G R
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 315
Query: 525 XXPPPPXPP 499
PPPP PP
Sbjct: 316 GSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/69 (24%), Positives = 18/69 (26%)
Frame = -1
Query: 705 GPPPPPFXXXXXXXXXXXXXXXPPPXXGGGGXKKKXXKXXGGGXKXKXXXXXGGGXKKRG 526
G PPPP PPP G + G R
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRA 300
Query: 525 XXPPPPXPP 499
PPPP PP
Sbjct: 301 GSPPPPPPP 309
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 5/43 (11%)
Frame = +2
Query: 527 PLFFXPPPXXXXXFXXXP-----PPXXXXFFFFXPPPPXXGGG 640
P FF PPP P PP F PPPP GG
Sbjct: 61 PSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGG 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,845,082
Number of Sequences: 27780
Number of extensions: 255558
Number of successful extensions: 1482
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1169
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -