Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_A19
(900 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 277 2e-75
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 273 2e-74
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 213 3e-56
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 160 3e-40
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 138 8e-34
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 33 0.073
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 32 0.097
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.13
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 31 0.17
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 31 0.22
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.52
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.90
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 28 2.1
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 28 2.1
SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces... 27 2.7
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 2.7
SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomy... 27 3.6
SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|ch... 27 3.6
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 27 3.6
SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr ... 27 3.6
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 27 3.6
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 27 4.8
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 27 4.8
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 4.8
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 26 6.3
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.3
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe... 26 6.3
SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.3
SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit Ssr3|Schizos... 26 6.3
SPCC550.03c |||RNA helicase involved in mRNA catabolism|Schizosa... 26 6.3
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 26 6.3
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 26 6.3
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 26 6.3
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 26 6.3
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 6.3
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 6.3
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 26 8.4
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 8.4
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 26 8.4
SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|ch... 26 8.4
SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate syn... 26 8.4
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 277 bits (678), Expect = 2e-75
Identities = 139/232 (59%), Positives = 163/232 (70%)
Frame = +2
Query: 47 QAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQ 226
QAA+L GD SE+ QD GIETAGGVMT LIKRN YSDNQ
Sbjct: 374 QAAVLTGDTSEKTQDLLLLDVAPLSMGIETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQ 433
Query: 227 PGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKST 406
PGVLIQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T
Sbjct: 434 PGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGT 493
Query: 407 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 586
K KITITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY +S++++++D
Sbjct: 494 GKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDD 553
Query: 587 EKLKEKISDSDKQTILDKCNDTIKWLDSTNWPTXXXXXXXXKNWKXFAIPII 742
LK+K+ SDK+T+ +TI+WLDS K + A PI+
Sbjct: 554 PNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIM 605
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 273 bits (670), Expect = 2e-74
Identities = 138/232 (59%), Positives = 162/232 (69%)
Frame = +2
Query: 47 QAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQ 226
QAAIL GD SE+ QD GIETAGGVMT LIKRN Y+DNQ
Sbjct: 374 QAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSEVFSTYADNQ 433
Query: 227 PGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKST 406
PGVLIQVFEGERA TKD NLLGKFEL+GIPPAPRGVPQIEVTFD+DANGILNVSA+EK T
Sbjct: 434 PGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGT 493
Query: 407 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 586
K KITITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY +S++++++D
Sbjct: 494 GKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDD 553
Query: 587 EKLKEKISDSDKQTILDKCNDTIKWLDSTNWPTXXXXXXXXKNWKXFAIPII 742
LK+K+ SDK+ I +TI+WLD K + A PI+
Sbjct: 554 PNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIM 605
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 213 bits (520), Expect = 3e-56
Identities = 109/209 (52%), Positives = 138/209 (66%), Gaps = 2/209 (0%)
Frame = +2
Query: 47 QAAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQ 226
QA +L G++ + + GIET GGVMT LI RN DNQ
Sbjct: 405 QAGVLSGEEGSD--NIVLLDVIPLTLGIETTGGVMTKLIGRNTPIPTRKSQIFSTAVDNQ 462
Query: 227 PGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS- 403
VLIQV+EGER +TKDNNLLGKF+L GIPPAPRGVPQIEVTF++DANG+L VSA++KS
Sbjct: 463 NTVLIQVYEGERTLTKDNNLLGKFDLRGIPPAPRGVPQIEVTFEVDANGVLTVSAVDKSG 522
Query: 404 TNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTM- 580
K K+ I NDKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y +S+K
Sbjct: 523 KGKPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYAYSLKGQFD 582
Query: 581 EDEKLKEKISDSDKQTILDKCNDTIKWLD 667
+DE+L K+ DKQ +LD D +WL+
Sbjct: 583 DDEQLGGKVDPEDKQAVLDAVEDVAEWLE 611
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 160 bits (388), Expect = 3e-40
Identities = 87/200 (43%), Positives = 117/200 (58%)
Frame = +2
Query: 50 AAILHGDKSEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQP 229
AAI G S V+D GIET GGV T LI RN +D Q
Sbjct: 418 AAIQGGVLSGHVKDLVLLDVTPLSLGIETLGGVFTRLINRNTTIPTRKSQVFSTAADGQT 477
Query: 230 GVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKSTN 409
V I+VF+GER + +DN L+G F+LTGI PAP+G PQIEV+FD+DA+GI+NVSA +K+TN
Sbjct: 478 AVEIRVFQGERELVRDNKLIGNFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATN 537
Query: 410 KENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 589
K++ IT+ G L+ EIE MV +AEKYR D +KE I+ N ES C ++S ++
Sbjct: 538 KDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVCTDIESNLDIH 596
Query: 590 KLKEKISDSDKQTILDKCND 649
K+K+ + + K D
Sbjct: 597 --KDKLDQQAVEDLRSKITD 614
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 138 bits (335), Expect = 8e-34
Identities = 75/214 (35%), Positives = 117/214 (54%), Gaps = 4/214 (1%)
Frame = +2
Query: 47 QAAILHGDK-SEEVQDXXXXXXXXXXXGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDN 223
QAA+L S++ QD G+ G V + RN +DN
Sbjct: 378 QAAVLTNKADSDKTQDLLLLDVVPLSLGVAMEGNVFGVVCPRNTPIPTIKKRTFTTVADN 437
Query: 224 QPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAIEKS 403
Q V V++GER +N LG+F+LTGIPP PRG ++E TF++DANGIL V+A+EK+
Sbjct: 438 QTTVTFPVYQGERVNCAENEPLGEFQLTGIPPMPRGQAELEATFELDANGILKVTAVEKT 497
Query: 404 TNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 583
T + I ITN G LS +I+ M+ A+K++ +D + ++AK+ LESY ++++T+
Sbjct: 498 TGRSAHIEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTIS 557
Query: 584 DEKLKEKISDSDKQTI---LDKCNDTIKWLDSTN 676
+ + K+ DK I L +C ++ L+ TN
Sbjct: 558 EPNVMMKLKRGDKSKIEAQLAECMSQLE-LEDTN 590
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 32.7 bits (71), Expect = 0.073
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 398 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMKS 574
K K ++++ + RL E +E+ EAE DK ET+ KNALE Y + ++
Sbjct: 534 KKLVKVADLSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRA 592
Query: 575 TMED 586
++D
Sbjct: 593 KLDD 596
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 32.3 bits (70), Expect = 0.097
Identities = 15/61 (24%), Positives = 35/61 (57%)
Frame = +2
Query: 458 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILD 637
EE++ +NEA+K NE ++ I+ +L+ +++ +++ + + S KQT+++
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQEKNAELRAELDNIRNAQAAIRSSKQTLIN 78
Query: 638 K 640
K
Sbjct: 79 K 79
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.9 bits (69), Expect = 0.13
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 13/122 (10%)
Frame = +2
Query: 332 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEK------ 493
+ ++ +F + N + +I K+ N+E +K R+ E+ ++++ +K
Sbjct: 1213 IDKVRNSFFKNLNSFYEMYSIAKAENEER---FEKEKRRIMSEDRDKLIRGRQKTSIVAK 1269
Query: 494 YRN-------EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDT 652
YRN DDKQ + KN+LE+ M+ + E K D ++ LDK D
Sbjct: 1270 YRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDNEMEDLDKMEDL 1328
Query: 653 IK 658
K
Sbjct: 1329 EK 1330
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 31.5 bits (68), Expect = 0.17
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 362 DANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE--TIQA 535
D LNVS + S +E +T ++ R+ +EE +RM ++ E K+K T+Q
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKRVTTVQG 117
Query: 536 KNA 544
+A
Sbjct: 118 LDA 120
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 31.1 bits (67), Expect = 0.22
Identities = 23/69 (33%), Positives = 35/69 (50%)
Frame = +2
Query: 407 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED 586
NK+ K T D SKEE+E +V E E D +Q + K+ L++ F ++
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KN 579
Query: 587 EKLKEKISD 613
KLK+K S+
Sbjct: 580 RKLKKKASN 588
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.9 bits (64), Expect = 0.52
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +2
Query: 452 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSD 619
+KEE+E +NE + E ++Q + ++N ++ +K +E EKLKE ++ D
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVE-EKLKENSANFD 1660
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.90
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 440 KGRLSKEEIERMVNEAEKYRNEDD 511
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 27.9 bits (59), Expect = 2.1
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 2/87 (2%)
Frame = +2
Query: 386 SAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFS 565
S+I+K K T+ + + E+ + E EK + +A+ A
Sbjct: 206 SSIQKPKLKAEGSTLKGQALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQ 265
Query: 566 MKSTMEDEKLKEKISDSDKQ--TILDK 640
+ +E EK KEK D D++ T+ DK
Sbjct: 266 NSAKLEKEKAKEKQKDKDQEQDTVSDK 292
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 377 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 508
L VS ++S K + + K EE+E VNE E++R D
Sbjct: 257 LCVSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPCC584.05 |sec1||SNARE binding protein Sec1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 693
Score = 27.5 bits (58), Expect = 2.7
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = -3
Query: 241 DEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQQILHLLRLVTV 62
D+YS L + + EC+++F + D S+ N EGK ++L LL
Sbjct: 343 DQYS-LHLTMAQECMNIFEKQQLNLIGAIEQDLSTGSNVEGKVPRSVLSELLPLLDEGNA 401
Query: 61 QDSSLINL 38
++S+ I L
Sbjct: 402 EESTKIRL 409
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 370 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRDRAY 474
R P R +YRE H + + H R QGR +Y
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSY 355
>SPAC2C4.15c |ubx2|ucp13|UBX domain protein Ubx2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 27.1 bits (57), Expect = 3.6
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = -1
Query: 387 ETLRIPLASMSKVTSI*GTPRGAGGIPVSSNLPSKLLSLVIARSPS 250
E L PLA MS TSI G G GG P + + + + +SPS
Sbjct: 76 EVLVDPLADMSAGTSIMGNNFGFGGFPRMNRRQRRRMG-IFDQSPS 120
>SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 509
Score = 27.1 bits (57), Expect = 3.6
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +2
Query: 368 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNA 544
+GIL+ + IEK +K K+ + N+ SK+ + + + +E DK KN
Sbjct: 154 DGILSFTVIEKVDDKNLKVRVNNNGKISSKKGVNLPKTDVDLPALSEKDKADLRFGVKNG 213
Query: 545 LESYCFSMKSTMEDE-KLKEKISDSDK 622
++ S ED ++E + + K
Sbjct: 214 VDMIFASFIRRAEDVIHIREVLGEEGK 240
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.1 bits (57), Expect = 3.6
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = +2
Query: 422 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 601
I +T + R S E V + E ++D + +++NA + S + + +KE
Sbjct: 240 IRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKE 297
Query: 602 KISDSDKQTILDKCNDTIK 658
K S +K DK + K
Sbjct: 298 KQSKIEKYMKSDKSSKNFK 316
>SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 377
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 527 IQAKNA-LESYCFSMKS---TMEDEKLKEKISDSDKQTILDKCNDTIKWLDSTNW 679
+QA+ A LESY ++ T+ + K+++++SD KQ + I + T W
Sbjct: 114 LQARKANLESYRAKLEKEYKTLAENKIQQRLSDGTKQLVTIDGLQYITGVSDTKW 168
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 473 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 577
M+++ RN+ +KQ TI KNA++ Y S+K T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +2
Query: 383 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 544
V A+ KS +++ ++ G + EEI ++++ E E+D++ E N+
Sbjct: 597 VPALFKSIDQDESDILSERIGAPTAEEISQLLDSVETNEEENDEELEKAMGVNS 650
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 503 EDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWL 664
E DK ET+ K A+ S+ +++++++ K+S D L+ CN+ + L
Sbjct: 242 ETDKFDETM--KEAILSF-----EDLKEQEIRRKVSSDDVHNYLESCNNHLSML 288
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.6 bits (56), Expect = 4.8
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +2
Query: 413 ENKITITNDKGRLSKEEIERM-VNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 583
++++TIT++ S E++E++ N AEK + E + K + ++ LES S + +E
Sbjct: 288 KSQMTITDE----SSEDLEKLHSNFAEKVKEEQELYKSLEKKRSDLESLLKSRRELLE 341
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 26.2 bits (55), Expect = 6.3
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 368 NGILNVSAIEK-STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 544
NG + S K ST+ + + DK + E+I + ++Y NED+ + +++ A
Sbjct: 375 NGTESQSKTTKHSTSLPSTEPVEVDKQYMESEKIPTIDEYLQEYSNEDEIVLQVLESFPA 434
Query: 545 LESYCFSMKSTMEDEKLKEKISDSD 619
S+ ++ +T++ + KI +S+
Sbjct: 435 AVSFS-TITNTIQAKYSNRKIKNSN 458
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 26.2 bits (55), Expect = 6.3
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = +2
Query: 455 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMKSTMEDEKLKEKI 607
KE ER+ E + NED K+K IQ KN+ + + ST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
Query: 608 SDSDKQTILDKCND 649
K +I + +D
Sbjct: 547 PSRFKTSISTEVHD 560
>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 652
Score = 26.2 bits (55), Expect = 6.3
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = +2
Query: 395 EKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 574
EK +KE K ++ + E V ++ NE+D+Q E IQ Y +++S
Sbjct: 36 EKKDDKEKSSKKVQKKNKVIESLNEMEVEMEDENENENDEQ-EAIQ-------YYINVES 87
Query: 575 TMEDEKLKEKISDSDK 622
DE L ++ DS +
Sbjct: 88 QDADETLHQEAQDSSE 103
>SPAC30C2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 6.3
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 458 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQT 628
+EIE M + + + D + + N + CFS +ED K KE +SD K +
Sbjct: 215 KEIEEMKDSNGMFCDADHVPLQGQELCNGILEECFSF---LEDAKTKEGLSDEMKSS 268
>SPAC23G3.10c |ssr3||SWI/SNF and RSC complex subunit
Ssr3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 425
Score = 26.2 bits (55), Expect = 6.3
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +2
Query: 377 LNVS--AIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 550
+NVS +EK T + +I + + + + M+++ +K R+ DDK E IQA +
Sbjct: 288 INVSEHTVEKVTIFDIRINTEDPRHSQIRSFLATMMSQ-DKIRSIDDKLTELIQAITYSQ 346
Query: 551 SYCFSMKSTMED--EKLKEKISDS--DKQTILDKCN 646
S MK E E + E I D + +LD N
Sbjct: 347 SKYDFMKKFSESPIEFINEWIESQSRDLEIVLDGTN 382
>SPCC550.03c |||RNA helicase involved in mRNA
catabolism|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1213
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 595 QGKDL*L*QADHPRQVQRHHQVAGFNQ 675
+GK++ L A+ Q+Q H+QV FN+
Sbjct: 1099 KGKEMILSVAEKVNQIQEHYQVLYFNE 1125
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.2 bits (55), Expect = 6.3
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 434 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMEDEKLKEKIS 610
+DK + E + E YRNE +E++ +N L S +++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 611 DSDKQT 628
+D+ T
Sbjct: 695 -TDRLT 699
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 26.2 bits (55), Expect = 6.3
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = +2
Query: 383 VSAIEKSTNKENKITITNDKGRLSKEEI--ERMVNEAEKYRNEDDKQKETIQAKNALESY 556
V ++K +K++K N + E+ E ++EK ++ K + KNA ++
Sbjct: 70 VVPVKKKPSKKSKKAKANAFEAFADEQSVEEEEEEDSEKPVRKNKKSSKKASPKNAFDAL 129
Query: 557 CFSMKSTMEDEKLKEKISDSDKQTILDKCND 649
M DE+ E S K+ K D
Sbjct: 130 ADDMDDLSLDEEESESSEKSKKKKKKSKSKD 160
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 26.2 bits (55), Expect = 6.3
Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = +2
Query: 377 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVN--EAEKYRNEDDKQKETIQAK-NAL 547
LNV +K N+IT T D S++E + N ++ D + + A
Sbjct: 10 LNVMKKKKPNESSNRITFTEDDSSSSEQEHAPIPNSFSSQITAASDASKDDNYDASIYGF 69
Query: 548 ESYCFSMKSTMEDEKLKEKISDSDKQ 625
+ + SMKS ++ +++ D++
Sbjct: 70 DEFYDSMKSAEREQMELKRLESKDRR 95
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 26.2 bits (55), Expect = 6.3
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 422 ITITND-KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 598
I + D K S I V + E+ + D T+Q K +S FS K + E L
Sbjct: 383 IPVNQDFKALQSYRRILDSVIQPERKEGKLDNLINTLQDKK--KSSTFSKK---DREVLL 437
Query: 599 EKISDSDKQTILDKC 643
+KIS+ D QT ++C
Sbjct: 438 KKISEIDSQTSFEQC 452
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 171 TLPSPLNRLRHSPPTLITNPEYSSKYLR 254
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +2
Query: 452 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 574
S+ E +++ E ++ ED+KQ E + K AL+ +C +++
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRN 339
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 25.8 bits (54), Expect = 8.4
Identities = 14/49 (28%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +2
Query: 458 EEIERMVNEAEKYRNEDDKQKETI-QAKNALESYCFSMKSTMEDEKLKE 601
+++E+M +K ++E+ ++ ETI Q + +E ++S +E+E +KE
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRS-LEEESIKE 538
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 440 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 550
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = +2
Query: 455 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTIL 634
+++I + + + E RNE+ ++++ ++ ESY ++ E ++ S K T +
Sbjct: 391 EDDIFKRLKQQEDRRNENYRRRQQRESNQESESYVDNVVIQRSVETQSTEVVTSSKSTSV 450
Query: 635 D 637
D
Sbjct: 451 D 451
>SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 703
Score = 25.8 bits (54), Expect = 8.4
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 401 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK--ETIQAKNALESYCF 562
+TNK N + N L EEI V + E + DD+ + E +A ++ E Y F
Sbjct: 46 NTNKHNVYSTKNSMYLLGFEEILNTVLDCEPHIFTDDELRVIENFKALDSDERYLF 101
>SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate
synthase Lsp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 8.4
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +2
Query: 563 SMKSTMEDEKLKEKISDSDKQTILDKCNDTIKWLDSTN 676
S+K MEDEKL EK+++ +I + D I+ ++S N
Sbjct: 114 SLKLIMEDEKLIEKVNEHLPPSI--RLWDVIRTINSFN 149
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,996,927
Number of Sequences: 5004
Number of extensions: 54191
Number of successful extensions: 255
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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