Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_A17
(742 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.12
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.12
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.12
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 32 0.37
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 31 0.65
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.86
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.86
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 30 2.0
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 30 2.0
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 3.5
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 3.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 3.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.5
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 29 4.6
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 29 4.6
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 28 8.0
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 28 8.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.0
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/54 (37%), Positives = 20/54 (37%)
Frame = +2
Query: 284 GAPQXPPXXGGPPXFFFPXXPPPXXXGGGGXPPXXXXXXFFFFXXXKKXPXPPP 445
G P PP GG P PPP GG PP F K P PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF-----KGGPPPPP 788
Score = 30.3 bits (65), Expect = 1.5
Identities = 30/110 (27%), Positives = 32/110 (29%)
Frame = +2
Query: 239 PPXXGKIXKPFF*EKGAPQXPPXXGGPPXFFFPXXPPPXXXGGGGXPPXXXXXXFFFFXX 418
PP + P G+ PP GGPP P PP GG PP
Sbjct: 687 PPTKMNLSAPSTSAGGSSALPPITGGPPP---PPGLPPIT---GGPPPPPPPGGLPPITG 740
Query: 419 XKKXPXPPPXXXXXGGGXXFXXPXKKXKKXXPPXXFFFFXPPXXFFFPPP 568
P PP GG P PP PP F PP
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP-----PPPGGFKGGPP 785
Score = 29.1 bits (62), Expect = 3.5
Identities = 27/101 (26%), Positives = 28/101 (27%)
Frame = +2
Query: 290 PQXPPXXGGPPXFFFPXXPPPXXXGGGGXPPXXXXXXFFFFXXXKKXPXPPPXXXXXGGG 469
P PP GGPP P PP GG PP P PPP
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPIT---GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 470 XXFXXPXKKXKKXXPPXXFFFFXPPXXFFFPPPXXXXKKXG 592
K PP F P + PP K G
Sbjct: 774 PPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDG 814
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 627 GGFFXXPXPPPPPXFF 580
GGF P PPPPP F
Sbjct: 778 GGFKGGPPPPPPPGMF 793
Score = 24.2 bits (50), Expect(2) = 2.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 379 GXPPPPPXXGG 347
G PPPPP GG
Sbjct: 757 GPPPPPPPPGG 767
Score = 23.4 bits (48), Expect(2) = 2.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 373 PPPPPXXGGGXXXKKKXGGPP 311
PPPPP GG GGPP
Sbjct: 770 PPPPPPPPGGF-----KGGPP 785
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/54 (37%), Positives = 20/54 (37%)
Frame = +2
Query: 284 GAPQXPPXXGGPPXFFFPXXPPPXXXGGGGXPPXXXXXXFFFFXXXKKXPXPPP 445
G P PP GG P PPP GG PP F K P PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF-----KGGPPPPP 788
Score = 30.3 bits (65), Expect = 1.5
Identities = 30/110 (27%), Positives = 32/110 (29%)
Frame = +2
Query: 239 PPXXGKIXKPFF*EKGAPQXPPXXGGPPXFFFPXXPPPXXXGGGGXPPXXXXXXFFFFXX 418
PP + P G+ PP GGPP P PP GG PP
Sbjct: 687 PPTKMNLSAPSTSAGGSSALPPITGGPPP---PPGLPPIT---GGPPPPPPPGGLPPITG 740
Query: 419 XKKXPXPPPXXXXXGGGXXFXXPXKKXKKXXPPXXFFFFXPPXXFFFPPP 568
P PP GG P PP PP F PP
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP-----PPPGGFKGGPP 785
Score = 29.1 bits (62), Expect = 3.5
Identities = 27/101 (26%), Positives = 28/101 (27%)
Frame = +2
Query: 290 PQXPPXXGGPPXFFFPXXPPPXXXGGGGXPPXXXXXXFFFFXXXKKXPXPPPXXXXXGGG 469
P PP GGPP P PP GG PP P PPP
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPIT---GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 470 XXFXXPXKKXKKXXPPXXFFFFXPPXXFFFPPPXXXXKKXG 592
K PP F P + PP K G
Sbjct: 774 PPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDG 814
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 627 GGFFXXPXPPPPPXFF 580
GGF P PPPPP F
Sbjct: 778 GGFKGGPPPPPPPGMF 793
Score = 24.2 bits (50), Expect(2) = 2.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 379 GXPPPPPXXGG 347
G PPPPP GG
Sbjct: 757 GPPPPPPPPGG 767
Score = 23.4 bits (48), Expect(2) = 2.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 373 PPPPPXXGGGXXXKKKXGGPP 311
PPPPP GG GGPP
Sbjct: 770 PPPPPPPPGGF-----KGGPP 785
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/54 (37%), Positives = 20/54 (37%)
Frame = +2
Query: 284 GAPQXPPXXGGPPXFFFPXXPPPXXXGGGGXPPXXXXXXFFFFXXXKKXPXPPP 445
G P PP GG P PPP GG PP F K P PPP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF-----KGGPPPPP 371
Score = 30.3 bits (65), Expect = 1.5
Identities = 30/110 (27%), Positives = 32/110 (29%)
Frame = +2
Query: 239 PPXXGKIXKPFF*EKGAPQXPPXXGGPPXFFFPXXPPPXXXGGGGXPPXXXXXXFFFFXX 418
PP + P G+ PP GGPP P PP GG PP
Sbjct: 270 PPTKMNLSAPSTSAGGSSALPPITGGPPP---PPGLPPIT---GGPPPPPPPGGLPPITG 323
Query: 419 XKKXPXPPPXXXXXGGGXXFXXPXKKXKKXXPPXXFFFFXPPXXFFFPPP 568
P PP GG P PP PP F PP
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP-----PPPGGFKGGPP 368
Score = 29.1 bits (62), Expect = 3.5
Identities = 27/101 (26%), Positives = 28/101 (27%)
Frame = +2
Query: 290 PQXPPXXGGPPXFFFPXXPPPXXXGGGGXPPXXXXXXFFFFXXXKKXPXPPPXXXXXGGG 469
P PP GGPP P PP GG PP P PPP
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPIT---GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Query: 470 XXFXXPXKKXKKXXPPXXFFFFXPPXXFFFPPPXXXXKKXG 592
K PP F P + PP K G
Sbjct: 357 PPPPGGFKGGPPPPPPPGMFAPMAPVIPDYLPPKKVPKVDG 397
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 627 GGFFXXPXPPPPPXFF 580
GGF P PPPPP F
Sbjct: 361 GGFKGGPPPPPPPGMF 376
Score = 24.2 bits (50), Expect(2) = 3.0
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 379 GXPPPPPXXGG 347
G PPPPP GG
Sbjct: 340 GPPPPPPPPGG 350
Score = 23.4 bits (48), Expect(2) = 3.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 373 PPPPPXXGGGXXXKKKXGGPP 311
PPPPP GG GGPP
Sbjct: 353 PPPPPPPPGGF-----KGGPP 368
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/56 (32%), Positives = 21/56 (37%)
Frame = +1
Query: 433 PPPPXXKXXGGGXXFXGPXKKXKKXXPPPXXFFFXPPPXXFFSPPPXXXKKXGGGG 600
PPPP + G F P + PPP F PPP + GGGG
Sbjct: 756 PPPPFGRGAGPMSSFPPPPRGGMHHMPPPPS--FRGGRGGHGGPPPPHFDRRGGGG 809
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 31.5 bits (68), Expect = 0.65
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +2
Query: 239 PPXXGKIXKP-FF*EKGAPQXPPXXGGPPXFFFPXXPPPXXXGGGGXPP 382
PP G P F AP P GPP F P PPP PP
Sbjct: 116 PPCFGPACPPPCFGPACAPSAPIIVNGPPPCFGPACPPPCFGPACAPPP 164
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +2
Query: 239 PPXXGKIXKP-FF*EKGAPQXPPXXGGPPXFFFPXXPPP 352
PP G P F AP P GPP F P PPP
Sbjct: 88 PPCFGPACPPPCFGPACAPPAPIIVNGPPPCFGPACPPP 126
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 0.86
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +2
Query: 239 PPXXGKIXKPFF*EKGAPQXPPXXGGPPXFF-FPXXPPPXXXGGGGXPP 382
PP G+ P P PP GPP P PPP GG PP
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 349
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 0.86
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +2
Query: 239 PPXXGKIXKPFF*EKGAPQXPPXXGGPPXFF-FPXXPPPXXXGGGGXPP 382
PP G+ P P PP GPP P PPP GG PP
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPP 359
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +2
Query: 590 GGGGGXGXXKXPPXKKKKXFFFXXKKKXGGGGGXXXXXXXXXXPPPPP 733
GG GG PP F + GGGGG PPPPP
Sbjct: 59 GGFGGNNYNNGPPP-----FDGGYNRPYGGGGGGGYGRPQGYVPPPPP 101
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 514 PPXXFFFXPPPXXFFSPPP 570
PP FF PPP F PPP
Sbjct: 290 PPPFGFFPPPPRGHFPPPP 308
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 5/39 (12%)
Frame = -1
Query: 685 PPPPXFFFXXKKKXF-----FFFXGGXFXXXXPPPPPXF 584
PPPP F + F GG + PPPPP F
Sbjct: 322 PPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPPHF 360
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 514 PPXXFFFXPPPXXFFSPPP 570
PP FF PPP F PPP
Sbjct: 290 PPPFGFFPPPPRGHFPPPP 308
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 5/39 (12%)
Frame = -1
Query: 685 PPPPXFFFXXKKKXF-----FFFXGGXFXXXXPPPPPXF 584
PPPP F + F GG + PPPPP F
Sbjct: 322 PPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPPHF 360
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +1
Query: 433 PPPPXXKXXGGGXXFXGPXKKXKKXXPPPXXFFFXPPPXXFFSPPP 570
PPPP GG P PPP PPP F +PPP
Sbjct: 75 PPPPGP----GGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPP 116
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 379 GXPPPPPXXGGGXXXKKKXGGPP 311
G PPPPP GG G PP
Sbjct: 93 GIPPPPPMMGGIPPPPPMFGAPP 115
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Frame = +2
Query: 290 PQXPPXXGGPPXFFFPXXPPPXXXG-GGGXPP 382
P P G PP F P PPP G G PP
Sbjct: 556 PAGPAPSGEPPGPFDPSGPPPSESSEGSGIPP 587
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/74 (31%), Positives = 25/74 (33%)
Frame = +1
Query: 349 PPXXGGGGXPPXXXXXXFFFFXXXKKXXPPPPXXKXXGGGXXFXGPXKKXKKXXPPPXXF 528
PP GG PP F PPP G G GP + PP
Sbjct: 301 PPSEYGGYAPPQQQQQQF--------GAPPPQGAPQQGFGAPPQGPPQGG-----PPQGS 347
Query: 529 FFXPPPXXFFSPPP 570
F PPP F +P P
Sbjct: 348 FGAPPPQQFHAPSP 361
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
Frame = +2
Query: 239 PPXXGKIXKPFF*EKGAPQXPPXXGGPPXFFFPXXPP-----PXXXGGGGXPP 382
PP G + F GAP P GGPP F PP P GG PP
Sbjct: 321 PPPQGAPQQGF----GAPPQGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPP 369
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 3.5
Identities = 24/95 (25%), Positives = 26/95 (27%)
Frame = +2
Query: 284 GAPQXPPXXGGPPXFFFPXXPPPXXXGGGGXPPXXXXXXFFFFXXXKKXPXPPPXXXXXG 463
G+P PP G P PPP G PP P PPP
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP----PPPTGSPPPPPAGGSPP 290
Query: 464 GGXXFXXPXKKXKKXXPPXXFFFFXPPXXFFFPPP 568
P + PP PP PPP
Sbjct: 291 PPRAGSPPPPPPPRGSPPTG--SLPPPQAGGSPPP 323
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 3.5
Identities = 24/95 (25%), Positives = 26/95 (27%)
Frame = +2
Query: 284 GAPQXPPXXGGPPXFFFPXXPPPXXXGGGGXPPXXXXXXFFFFXXXKKXPXPPPXXXXXG 463
G+P PP G P PPP G PP P PPP
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP----PPPTGSPPPPPAGGSPP 311
Query: 464 GGXXFXXPXKKXKKXXPPXXFFFFXPPXXFFFPPP 568
P + PP PP PPP
Sbjct: 312 PPRAGSPPPPPPPRGSPPTG--SLPPPQAGGSPPP 344
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 3.5
Identities = 24/95 (25%), Positives = 26/95 (27%)
Frame = +2
Query: 284 GAPQXPPXXGGPPXFFFPXXPPPXXXGGGGXPPXXXXXXFFFFXXXKKXPXPPPXXXXXG 463
G+P PP G P PPP G PP P PPP
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPP----PPPTGSPPPPPAGGSPP 296
Query: 464 GGXXFXXPXKKXKKXXPPXXFFFFXPPXXFFFPPP 568
P + PP PP PPP
Sbjct: 297 PPRAGSPPPPPPPRGSPPTG--SLPPPQAGGSPPP 329
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 538 PPPXXFFSPPPXXXKKXGGGGGGG 609
PPP PPP + GGGGG
Sbjct: 1323 PPPPMIRGPPPDQMYRDRSGGGGG 1346
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +2
Query: 290 PQXPPXXGGPPXFFFPXXPPPXXXGGGGXP 379
P PP GPP +P P P G P
Sbjct: 1284 PPPPPQMTGPPIGIYPGPPAPGNLPGSSRP 1313
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 538 PPPXXFFSPPPXXXKKXGGGGGGG 609
PPP PPP + GGGGG
Sbjct: 1323 PPPPMIRGPPPDQMYRDRSGGGGG 1346
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +2
Query: 290 PQXPPXXGGPPXFFFPXXPPPXXXGGGGXP 379
P PP GPP +P P P G P
Sbjct: 1284 PPPPPQMTGPPIGIYPGPPAPGNLPGSSRP 1313
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 559 SPPPXXXKKXGGGGGGG 609
+PPP GGGGGGG
Sbjct: 280 APPPPSGSAMGGGGGGG 296
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 27.9 bits (59), Expect = 8.0
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 559 SPPPXXXKKXGGGGGGG 609
+PPP GGGGGGG
Sbjct: 174 APPPPSGSAMGGGGGGG 190
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 299 PPXXGGPPXFFFPXXPPPXXXGGGGXPP 382
PP GGPP P P GG PP
Sbjct: 1586 PPLMGGPPPRLGMPPPGPPPPNGGPPPP 1613
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,160,640
Number of Sequences: 27780
Number of extensions: 407662
Number of successful extensions: 2497
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1934
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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