Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP06_F_A07
         (929 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    28   0.14 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    25   1.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   1.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   1.7  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          24   1.7  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   9.1  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 27.9 bits (59), Expect = 0.14
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 10  PYHXXYRESLRFEKNLKDSINHKYI 84
           P H  Y+  L  E+  KDSI+H ++
Sbjct: 440 PVHTSYKSGLNLEQEKKDSISHYHL 464


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 49  KNLKDSINHKYINNCIIVNIYRLKMSFNILLKTSERGIFL 168
           ++L++S+N K  NN   +  Y ++   N   K  ERGI +
Sbjct: 285 RSLQNSLNGKNFNNDDDIKSYLIQFFANKNQKFYERGIMM 324


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = -3

Query: 417 VWIKLFTCDNYFSSLHCKQSTINTKTNIQSWMKPSGSLRS*HMSRLNKMPILY 259
           V I+  T D   +     +S +N   +IQS  K   ++      RLN  P  Y
Sbjct: 448 VSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTY 500


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = -3

Query: 417 VWIKLFTCDNYFSSLHCKQSTINTKTNIQSWMKPSGSLRS*HMSRLNKMPILY 259
           V I+  T D   +     +S +N   +IQS  K   ++      RLN  P  Y
Sbjct: 448 VSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTY 500


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = -3

Query: 417 VWIKLFTCDNYFSSLHCKQSTINTKTNIQSWMKPSGSLRS*HMSRLNKMPILY 259
           V I+  T D   +     +S +N   +IQS  K   ++      RLN  P  Y
Sbjct: 74  VSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTY 126


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 9/28 (32%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = -3

Query: 501 LWYNI--VIFFIDGLVIAPFVHPLDPSV 424
           L+Y +  ++  I G+V+   +HP DP +
Sbjct: 140 LYYTVTTILAAIVGIVMVLIIHPGDPRI 167


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,086
Number of Sequences: 438
Number of extensions: 4787
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30355689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)