Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP06_F_A02
(901 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016684-10|AAB66205.1| 340|Caenorhabditis elegans Hypothetical... 32 0.64
AC006714-4|AAK29715.4| 357|Caenorhabditis elegans Hypothetical ... 32 0.64
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 31 1.1
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 31 1.5
AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical... 29 3.4
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 29 3.4
Z81083-3|CAB03104.1| 559|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 29 4.5
Z81508-6|CAB04147.1| 338|Caenorhabditis elegans Hypothetical pr... 29 6.0
AC006619-3|AAK68253.1| 943|Caenorhabditis elegans Hypothetical ... 29 6.0
AF000195-2|AAC24267.1| 316|Caenorhabditis elegans Hypothetical ... 28 7.9
>AF016684-10|AAB66205.1| 340|Caenorhabditis elegans Hypothetical
protein F45C12.6 protein.
Length = 340
Score = 31.9 bits (69), Expect = 0.64
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +3
Query: 360 KTLSELGLKTGETLIVEEKAVTKINATQTETRPSQNG----VESHETIESCRPGILMKKV 527
+T +E + G E+ + +I T T S NG VES +++ +PG+ + KV
Sbjct: 41 RTSNEKQFQVGMDFYWNEEEIERITGTVTLCYSSGNGFGSWVESETSVDLSKPGLTIGKV 100
Query: 528 VPSDNSCLFTSIGFVLNGSIDTSVHTL 608
++ ++TS + L +H L
Sbjct: 101 FDTNFHVMYTSYRYSLTIHRSHCLHRL 127
>AC006714-4|AAK29715.4| 357|Caenorhabditis elegans Hypothetical
protein Y119D3B.16 protein.
Length = 357
Score = 31.9 bits (69), Expect = 0.64
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +2
Query: 209 KRTASFERFDLRKYCGRIEDVFVQ 280
++ FE+FD++ +C + ED++VQ
Sbjct: 163 RKKQGFEKFDIKTFCAKAEDIYVQ 186
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = -1
Query: 292 ISDMLDKNIFNSPTVLSEVKSFKTCCPFLLLILNTNADIFT*LVFFRSIIYLYCNWVTKI 113
+S+++D+ +SP +L+E+KS C L+ L + ++ L+ RS W T I
Sbjct: 64 LSNLIDQTAKDSPEMLAEIKSQAQSCENLVEFLQSMKNVEEQLIIMRSKTTNRVEWGTAI 123
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/79 (22%), Positives = 39/79 (49%)
Frame = +3
Query: 216 QQVLKDLTSESTVGELKMFLSSISDISIERVNILCGYPPKALDTSDNSKTLSELGLKTGE 395
+Q++ ++ + TV LK + +++ R +L K ++ DN+KT+++ G+ +
Sbjct: 32 KQIVVEMKDKETVSILKNRIEQETEVLTNRQVLLF----KGMELKDNNKTMTDCGINSDA 87
Query: 396 TLIVEEKAVTKINATQTET 452
+ + K T I T T
Sbjct: 88 KITMNVKMSTGIVTNPTTT 106
>AL132904-23|CAC35839.2| 312|Caenorhabditis elegans Hypothetical
protein Y111B2A.10b protein.
Length = 312
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 402 IVEEKAVTKINATQTETRPSQNGVESHETIESCRPGILMKKVVPSDNSC 548
I+E++ V+KI Q+ S+ + SC+PG + V D SC
Sbjct: 146 IIEKQRVSKILKVQSLPSSPALSTVSYASFSSCQPGPITSPVSYRDKSC 194
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 402 IVEEKAVTKINATQTETRPSQNGVESHETIESCRPGILMKKVVPSDNSC 548
I+E++ V+KI Q+ S+ + SC+PG + V D SC
Sbjct: 264 IIEKQRVSKILKVQSLPSSPALSTVSYASFSSCQPGPITSPVSYRDKSC 312
>Z81083-3|CAB03104.1| 559|Caenorhabditis elegans Hypothetical
protein F44F1.4 protein.
Length = 559
Score = 29.1 bits (62), Expect = 4.5
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +3
Query: 159 NTSQVKMSALVFKIKSKNGQQVLKD--LTSESTVGELKMFLSSISDISIERVNILCGYPP 332
+ SQ + LV + KN V KD +T+ S +L S+ ++ I+R + LCG
Sbjct: 187 DNSQTPVDTLVMQSIEKNELAVNKDEEVTNISNEFGCLDYLESLPELRIQRCSKLCGDIV 246
Query: 333 KALDTSDNSKTLSELGLKTGETLIVEEKAVTKINATQTE 449
+ + + S + + TG+ + T N+ +E
Sbjct: 247 QVVSKTTGSYSTYNYTIYTGKFNNTNKVYCTSCNSVTSE 285
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 372 ELGLKTGETLIVEEKAVTKINATQTETRPSQNGV 473
ELG KTG+ +IV +K+ + + E PS++G+
Sbjct: 1055 ELGFKTGDVIIVTDKSEAEWWSGHREQDPSKSGL 1088
>Z81508-6|CAB04147.1| 338|Caenorhabditis elegans Hypothetical
protein F20E11.10 protein.
Length = 338
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -2
Query: 639 LATSIAIIASLMYVLMCLCYHLKQNLC**KGMNYQKELLFSLIYQ 505
+A ++ I+ LMY++ LK+N K QK+ LF++I Q
Sbjct: 206 VAVTVEILFYLMYLIWNSIKQLKENKMSQKTFQLQKQFLFAIIVQ 250
>AC006619-3|AAK68253.1| 943|Caenorhabditis elegans Hypothetical
protein C46C11.1 protein.
Length = 943
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 327 PPKALDTSDNSKTLSELGLKTGETLIVEEKAVTKINATQTETRPSQNGVESHET 488
P D + T ELGL+ E L++EE+ + + T ++N E H T
Sbjct: 675 PDMGEDDIELIDTPVELGLEATENLVIEEEIEALTSVDEVSTPSTENIQEVHTT 728
>AF000195-2|AAC24267.1| 316|Caenorhabditis elegans Hypothetical
protein C32F10.4 protein.
Length = 316
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 165 SCFFVL*FICIVIGSQKYMSISTNKLRTNMY 73
SCFF+ I + + +YM I N LR N Y
Sbjct: 161 SCFFLTVSIIVALVQMRYMMILYNFLRRNAY 191
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,647,147
Number of Sequences: 27780
Number of extensions: 374671
Number of successful extensions: 1036
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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