Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_P24
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431...   255   3e-68
07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609...   253   2e-67
05_02_0051 - 6110320-6110375,6110554-6110696,6111011-6111124,611...    31   1.7  
01_07_0115 - 41164227-41164452,41164515-41164601,41164757-41165313     30   2.2  
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119...    29   6.8  
09_06_0103 + 20873310-20873382,20873530-20873735                       29   6.8  
08_01_0152 - 1190358-1190462,1190648-1190765,1191134-1192691,119...    28   9.0  
01_05_0742 - 24829151-24829307,24829894-24830136,24830175-24830251     28   9.0  

>03_01_0582 -
           4318837-4318967,4319219-4319399,4319504-4319701,
           4319791-4320053,4320453-4320597
          Length = 305

 Score =  255 bits (625), Expect = 3e-68
 Identities = 119/197 (60%), Positives = 146/197 (74%)
 Frame = +1

Query: 106 ATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKL 285
           A   G    L+  E+DV  MLAA  HLG +N +FQME YVYKRR+DG ++INL +TWEKL
Sbjct: 3   AVAGGAARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWEKL 62

Query: 286 VLAARAXVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFRE 465
            LAAR  VAIENP D+ V S+RP+GQRAVLKFA +TGA  IAGR TPG FTNQ+Q +F E
Sbjct: 63  QLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSE 122

Query: 466 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLL 645
           PRLLI+ DP  DHQPI E++  NIP IA C+TDSP+R+VDI IP N K  +SIG ++WLL
Sbjct: 123 PRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLL 182

Query: 646 AREVLRLRGVLPRDQRW 696
           AR VL++RG +    +W
Sbjct: 183 ARMVLQMRGTILPGHKW 199



 Score = 29.1 bits (62), Expect = 5.2
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +2

Query: 698 DVVVDLFFYRDP 733
           DV+VDLFFYRDP
Sbjct: 200 DVMVDLFFYRDP 211


>07_03_1272 -
           25360180-25360286,25360454-25360658,25360748-25360945,
           25361034-25361296,25361865-25362009
          Length = 305

 Score =  253 bits (619), Expect = 2e-67
 Identities = 116/188 (61%), Positives = 142/188 (75%)
 Frame = +1

Query: 133 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAXVA 312
           L+  E+D+  MLAA  HLG +N +FQME YVYKRR DG ++INL +TWEKL LAAR  VA
Sbjct: 12  LSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIVA 71

Query: 313 IENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP 492
           IENP D+ V S+RP+GQRAVLKFA +TGA  IAGR TPG FTNQ+Q +F EPRLLI+ DP
Sbjct: 72  IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDP 131

Query: 493 AQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRG 672
             DHQPI E++  NIP IA C+TDSP+R+VDI IP N K   SIG ++WLLAR VL++RG
Sbjct: 132 RTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRG 191

Query: 673 VLPRDQRW 696
            +    +W
Sbjct: 192 TILPGHKW 199



 Score = 29.1 bits (62), Expect = 5.2
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +2

Query: 698 DVVVDLFFYRDP 733
           DV+VDLFFYRDP
Sbjct: 200 DVMVDLFFYRDP 211


>05_02_0051 -
           6110320-6110375,6110554-6110696,6111011-6111124,
           6111586-6111685,6111768-6111850,6112003-6112087,
           6112773-6112828,6113569-6114056
          Length = 374

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = -1

Query: 197 FSAPRWVVAASILVTSSSLRASTSNPPDIVAII*VTTKRV*XXLGGDXETLKGF 36
           FS    +VAA+ L  + S RA+T  PP + A+   T K V    G   +TL+ F
Sbjct: 58  FSVACLLVAAASLAFAFSARAATLQPPPLAAVAEATAK-VAFRCGRAEDTLRAF 110


>01_07_0115 - 41164227-41164452,41164515-41164601,41164757-41165313
          Length = 289

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -1

Query: 731 GHGRRTNQPQHPQRWSRGSTPRSLNTSRANNHHIKPIEWEDLVL 600
           G GRR   P    RW       S  + R   H I P+ ++DL+L
Sbjct: 157 GRGRRRRAPTWHGRWKMWPPATSSGSGRGRYHPI-PVRYQDLIL 199


>11_06_0458 + 23808402-23808469,23808800-23809684,23810011-23811961,
            23812210-23812285,23813064-23813072,23813243-23813335,
            23813578-23813581,23813780-23814703,23814926-23815909,
            23816073-23816118,23816376-23816951,23817253-23817798,
            23817820-23818416
          Length = 2252

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -1

Query: 200  TFSAPRWVVAASILVTSSSLRASTSNP 120
            TF A RWV+AA   V  + L AS S+P
Sbjct: 2100 TFHAHRWVLAARSPVLKAKLSASPSSP 2126


>09_06_0103 + 20873310-20873382,20873530-20873735
          Length = 92

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +3

Query: 378 VCRAHRCYAYC---GTFHTRCFY*PDPSCIP*TSSLDCI 485
           +CR+ RC  YC   G    RC +  DPS     ++ +C+
Sbjct: 45  LCRSTRCNQYCVSEGATRGRCGFSSDPSATALKNATECL 83


>08_01_0152 -
           1190358-1190462,1190648-1190765,1191134-1192691,
           1193338-1193530
          Length = 657

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = -2

Query: 382 QTSVQHADRRAVMR*RTHQRGSRWLXXHEQPEQVFPRYDAS*SHGYHQHVVC 227
           + SV + D+  ++  RT  RGS  L    QPE + PRY+       H   VC
Sbjct: 269 KNSVNNDDKPMLVSIRTKGRGSSTLPSIAQPEPL-PRYNKHWRRKAHSMCVC 319


>01_05_0742 - 24829151-24829307,24829894-24830136,24830175-24830251
          Length = 158

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
 Frame = +2

Query: 830 KLEPXASWAEXTAPP---XXPAGXPXFWGPP 913
           KLE  ASWA  + PP      +  P  W PP
Sbjct: 48  KLEASASWANQSTPPRWLSSASAPPSSWAPP 78


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,681,687
Number of Sequences: 37544
Number of extensions: 576666
Number of successful extensions: 1449
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1449
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)