Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_P21
(889 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 38 0.010
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.12
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.12
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.12
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 33 0.21
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 33 0.21
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 32 0.63
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 31 0.83
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 31 0.83
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 1.1
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 1.1
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 31 1.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 1.9
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 1.9
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 30 2.5
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 3.4
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 3.4
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 3.4
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 3.4
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 3.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.4
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 5.9
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 29 5.9
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 29 5.9
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 5.9
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 28 7.8
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1
Query: 655 PPPXGGGXKXPXPPPPPKXXGG 590
PPP GGG + P PPPPP GG
Sbjct: 44 PPPCGGGYEAPPPPPPPSYAGG 65
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 656 PPPXGGGXXKXXPPPXPXKXXG 591
PPP GGG PPP P G
Sbjct: 44 PPPCGGGYEAPPPPPPPSYAGG 65
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 37.9 bits (84), Expect = 0.010
Identities = 23/71 (32%), Positives = 25/71 (35%)
Frame = +1
Query: 547 PPXXLXPPQKKKPXXPXXFXGXGGGXXFXXPPPXGGGXFFXLPPQKXGGXXPPXKKXFFX 726
PP + PP + P P F F PPP GG PP G PP
Sbjct: 47 PPSGILPPGQSIPK-PSFFIPPPVPNGFIPPPPGPGG--IPPPPPMFAGGIPPPPPMMGG 103
Query: 727 XPPXPPXXXGP 759
PP PP P
Sbjct: 104 IPPPPPMFGAP 114
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Frame = -2
Query: 363 PXFF---PKKXXFFXPTXIXGGXPXPXGFFXXGGPXXPP-KGGXP 241
P FF P F P GG P P F G P PP GG P
Sbjct: 61 PSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIP 105
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.12
Identities = 24/72 (33%), Positives = 24/72 (33%)
Frame = +1
Query: 541 GXPPXXLXPPQKKKPXXPXXFXGXGGGXXFXXPPPXGGGXFFXLPPQKXGGXXPPXKKXF 720
G PP PP P P G PPP GG LPP G PP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG----LPPISGGPPPPPPPPGG 767
Query: 721 FXXPPXPPXXXG 756
PP PP G
Sbjct: 768 CPPPPPPPPPGG 779
Score = 31.5 bits (68), Expect = 0.83
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 655 PPPXGGGXKXPXPPPPP 605
PPP GG P PPPPP
Sbjct: 761 PPPPPGGCPPPPPPPPP 777
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 655 PPPXGGGXKXPXPPPPPKXXGG 590
PPP GG P PPPP GG
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGG 783
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 655 PPPXGGGXKXPXPPPPP 605
PPP GG P PPPPP
Sbjct: 774 PPPPGGFKGGPPPPPPP 790
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 655 PPPXGGGXKXPXPPPPP 605
PPP GG K PPPPP
Sbjct: 773 PPPPPGGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 704 GGXXPPXFWGGRXKNXPPPXGGGXXKXXPPPXP 606
GG PP G PPP G K PPP P
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 704 GGXXPPXFWGGRXKNXPPPXGGGXXKXXPPPXP 606
G PP GG PPP GG PPP P
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.12
Identities = 24/72 (33%), Positives = 24/72 (33%)
Frame = +1
Query: 541 GXPPXXLXPPQKKKPXXPXXFXGXGGGXXFXXPPPXGGGXFFXLPPQKXGGXXPPXKKXF 720
G PP PP P P G PPP GG LPP G PP
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG----LPPISGGPPPPPPPPGG 767
Query: 721 FXXPPXPPXXXG 756
PP PP G
Sbjct: 768 CPPPPPPPPPGG 779
Score = 31.5 bits (68), Expect = 0.83
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 655 PPPXGGGXKXPXPPPPP 605
PPP GG P PPPPP
Sbjct: 761 PPPPPGGCPPPPPPPPP 777
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 655 PPPXGGGXKXPXPPPPPKXXGG 590
PPP GG P PPPP GG
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGG 783
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 655 PPPXGGGXKXPXPPPPP 605
PPP GG P PPPPP
Sbjct: 774 PPPPGGFKGGPPPPPPP 790
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 655 PPPXGGGXKXPXPPPPP 605
PPP GG K PPPPP
Sbjct: 773 PPPPPGGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 704 GGXXPPXFWGGRXKNXPPPXGGGXXKXXPPPXP 606
GG PP G PPP G K PPP P
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 704 GGXXPPXFWGGRXKNXPPPXGGGXXKXXPPPXP 606
G PP GG PPP GG PPP P
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.12
Identities = 24/72 (33%), Positives = 24/72 (33%)
Frame = +1
Query: 541 GXPPXXLXPPQKKKPXXPXXFXGXGGGXXFXXPPPXGGGXFFXLPPQKXGGXXPPXKKXF 720
G PP PP P P G PPP GG LPP G PP
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG----LPPISGGPPPPPPPPGG 350
Query: 721 FXXPPXPPXXXG 756
PP PP G
Sbjct: 351 CPPPPPPPPPGG 362
Score = 31.5 bits (68), Expect = 0.83
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 655 PPPXGGGXKXPXPPPPP 605
PPP GG P PPPPP
Sbjct: 344 PPPPPGGCPPPPPPPPP 360
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -1
Query: 655 PPPXGGGXKXPXPPPPPKXXGG 590
PPP GG P PPPP GG
Sbjct: 345 PPPPGGCPPPPPPPPPGGFKGG 366
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 655 PPPXGGGXKXPXPPPPP 605
PPP GG P PPPPP
Sbjct: 357 PPPPGGFKGGPPPPPPP 373
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 655 PPPXGGGXKXPXPPPPP 605
PPP GG K PPPPP
Sbjct: 356 PPPPPGGFKGGPPPPPP 372
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 704 GGXXPPXFWGGRXKNXPPPXGGGXXKXXPPPXP 606
GG PP G PPP G K PPP P
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 704 GGXXPPXFWGGRXKNXPPPXGGGXXKXXPPPXP 606
G PP GG PPP GG PPP P
Sbjct: 340 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 33.5 bits (73), Expect = 0.21
Identities = 24/73 (32%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Frame = +1
Query: 547 PPXXLXPPQKKK--PXXPXXFXGXGGGXXFXXPPPXGGGXFFXLPPQKXGGXXPPXKKXF 720
PP PP + P P F G G F PPP G PP+ G PP
Sbjct: 291 PPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMG----PPR---GFMPPPHPMM 343
Query: 721 FXXPPXPPXXXGP 759
F P PP P
Sbjct: 344 FRGGPYPPFFPPP 356
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 33.5 bits (73), Expect = 0.21
Identities = 24/73 (32%), Positives = 26/73 (35%), Gaps = 2/73 (2%)
Frame = +1
Query: 547 PPXXLXPPQKKK--PXXPXXFXGXGGGXXFXXPPPXGGGXFFXLPPQKXGGXXPPXKKXF 720
PP PP + P P F G G F PPP G PP+ G PP
Sbjct: 291 PPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMG----PPR---GFMPPPHPMM 343
Query: 721 FXXPPXPPXXXGP 759
F P PP P
Sbjct: 344 FRGGPYPPFFPPP 356
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 31.9 bits (69), Expect = 0.63
Identities = 23/87 (26%), Positives = 27/87 (31%), Gaps = 7/87 (8%)
Frame = +1
Query: 535 FXGXPPXXLXPPQKKK----PXXPXXFXGXGGGXXFXXPP---PXGGGXFFXLPPQKXGG 693
F G PP PP P P G PP P +PP G
Sbjct: 123 FPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPG 182
Query: 694 XXPPXKKXFFXXPPXPPXXXGPXQKKK 774
PP + PP P GP Q+ +
Sbjct: 183 AYPPPRMPIGHGPPGGPPMPGPPQRSR 209
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 31.9 bits (69), Expect = 0.63
Identities = 23/87 (26%), Positives = 27/87 (31%), Gaps = 7/87 (8%)
Frame = +1
Query: 535 FXGXPPXXLXPPQKKK----PXXPXXFXGXGGGXXFXXPP---PXGGGXFFXLPPQKXGG 693
F G PP PP P P G PP P +PP G
Sbjct: 123 FPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRGYPPAPAPGVYMPPPGMPG 182
Query: 694 XXPPXKKXFFXXPPXPPXXXGPXQKKK 774
PP + PP P GP Q+ +
Sbjct: 183 AYPPPRMPIGHGPPGGPPMPGPPQRSR 209
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 613 GGGXXFXXPPPXGGGXFFXLPPQKXGGXXPPXKKXFFXXPPXP 741
GG PPP LPP+ GG PP PP P
Sbjct: 762 GGPVGVGVPPPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPP 804
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 31.5 bits (68), Expect = 0.83
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 613 GGGXXFXXPPPXGGGXFFXLPPQKXGGXXPPXKKXFFXXPPXP 741
GG PPP LPP+ GG PP PP P
Sbjct: 762 GGPVGVGVPPPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPP 804
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 655 PPPXGGGXKXPXPPPPPKXXG 593
PPP G G P PPPPP G
Sbjct: 664 PPPGGLGGFMPPPPPPPPMPG 684
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = -3
Query: 767 FWXGPXFXGGXGGXXKKXFFXGGXXPPXFWGGRXKNXPPPXGGGXXKXXPPPXP 606
F+ P GG G K ++ G PPP G G PPP P
Sbjct: 632 FYTSPGARGGAGAKANKGWYGSGGG-----SSMPMPVPPPGGLGGFMPPPPPPP 680
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 655 PPPXGGGXKXPXPPPPPKXXG 593
PPP G G P PPPPP G
Sbjct: 664 PPPGGLGGFMPPPPPPPPMPG 684
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = -3
Query: 767 FWXGPXFXGGXGGXXKKXFFXGGXXPPXFWGGRXKNXPPPXGGGXXKXXPPPXP 606
F+ P GG G K ++ G PPP G G PPP P
Sbjct: 632 FYTSPGARGGAGAKANKGWYGSGGG-----SSMPMPVPPPGGLGGFMPPPPPPP 680
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/69 (27%), Positives = 22/69 (31%), Gaps = 4/69 (5%)
Frame = +1
Query: 565 PPQKKKPXXPXXFXGXGGGXXFXXPPPXGGGXFFXLPPQKXGGXXPPXKKXF----FXXP 732
PP P P + G + PPP G + PP G P F P
Sbjct: 78 PPGPSGPSGPPVYHNQGPPRGYPPPPPQGADTWRGAPPPAHHGHFGPPGHHFQGPPQHFP 137
Query: 733 PXPPXXXGP 759
P PP P
Sbjct: 138 PGPPRPHFP 146
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 652 PPXGGGXKXPXPPPPPKXXGG 590
P G G P PPPPP GG
Sbjct: 642 PAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 652 PPXGGGXKXPXPPPPPKXXGG 590
P G G P PPPPP GG
Sbjct: 468 PAVGAGAPPPPPPPPPSGAGG 488
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/59 (28%), Positives = 22/59 (37%)
Frame = +1
Query: 607 GXGGGXXFXXPPPXGGGXFFXLPPQKXGGXXPPXKKXFFXXPPXPPXXXGPXQKKKTXP 783
G GG PPP GG + P GG + + PP PP P + + P
Sbjct: 60 GFGGNNYNNGPPPFDGG--YNRPYGGGGGGGYGRPQGYVPPPPPPPTQPEPEPEPRPEP 116
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Frame = -2
Query: 402 RPXWGAKKRXGGXPXFFPKKXXFFXPTXIXGGXPXPXGFFXXGGPXXPP--KGGXP 241
RP G R GG P + P GG P P GGP P GG P
Sbjct: 91 RPTTGMSMRNGGPPVPPSRSGMIPVPPSRSGGPPAPMPVSRAGGPPRAPTSMGGRP 146
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/69 (33%), Positives = 24/69 (34%)
Frame = +1
Query: 550 PXXLXPPQKKKPXXPXXFXGXGGGXXFXXPPPXGGGXFFXLPPQKXGGXXPPXKKXFFXX 729
P PP P G GG PPP GG PP GG PP +
Sbjct: 1549 PQNRGPPMGGLPPPHGGMNGWRGG-----PPPPRGGSHCQGPPPLMGG--PPPRLGM--P 1599
Query: 730 PPXPPXXXG 756
PP PP G
Sbjct: 1600 PPGPPPPNG 1608
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +1
Query: 637 PPPXGGGXFFXLPPQKXGGXXPPXKKXFFXXPPXPP 744
PPP G LPP + GG PP PP PP
Sbjct: 301 PPPRGSPPTGSLPPPQAGGSPPPAGT---GSPPPPP 333
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 546 PPXXSXPPPKKKTXXPPXFXGGGGGXGFXXPPPXGGG 656
PP PPP + PP G PPP GG
Sbjct: 283 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 319
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +1
Query: 637 PPPXGGGXFFXLPPQKXGGXXPPXKKXFFXXPPXPP 744
PPP G LPP + GG PP PP PP
Sbjct: 322 PPPRGSPPTGSLPPPQAGGSPPPAGT---GSPPPPP 354
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 546 PPXXSXPPPKKKTXXPPXFXGGGGGXGFXXPPPXGGG 656
PP PPP + PP G PPP GG
Sbjct: 304 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 340
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +1
Query: 637 PPPXGGGXFFXLPPQKXGGXXPPXKKXFFXXPPXPP 744
PPP G LPP + GG PP PP PP
Sbjct: 307 PPPRGSPPTGSLPPPQAGGSPPPAGT---GSPPPPP 339
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 546 PPXXSXPPPKKKTXXPPXFXGGGGGXGFXXPPPXGGG 656
PP PPP + PP G PPP GG
Sbjct: 289 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGG 325
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/43 (32%), Positives = 16/43 (37%)
Frame = +1
Query: 550 PXXLXPPQKKKPXXPXXFXGXGGGXXFXXPPPXGGGXFFXLPP 678
P PP P P + GG PPP GG + PP
Sbjct: 406 PGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPP 448
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 652 PPXGGGXKXPXPPPPP 605
PP G G P PPPPP
Sbjct: 240 PPVGAGAPPPPPPPPP 255
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Frame = +3
Query: 549 PXXSXPPPKK----KTXXPPXFXGGGGGXGFXXPP 641
P S PPP + PP F GG GG G PP
Sbjct: 766 PMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPP 800
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = -3
Query: 710 FXGGXXPPXFW--GGRXKNXPPPXGGGXXKXXPPP 612
F G PP F G + PPP GG PPP
Sbjct: 751 FNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPP 785
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 652 PPXGGGXKXPXPPPPP 605
PP G G P PPPPP
Sbjct: 226 PPVGAGAPPPPPPPPP 241
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -1
Query: 652 PPXGGGXKXPXPPPPP 605
PP G G P PPPPP
Sbjct: 226 PPVGAGAPPPPPPPPP 241
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 655 PPPXGGGXKXPXPPPPP 605
PPP G P PPPPP
Sbjct: 288 PPPPSSGMWPPPPPPPP 304
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 655 PPPXGGGXKXPXPPPPP 605
PPP G P PPPPP
Sbjct: 298 PPPPSSGMWPPPPPPPP 314
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 655 PPPXGGGXKXPXPPPPPKXXG 593
PPP G P PPPPP G
Sbjct: 43 PPPMCGCAPPPPPPPPPPMCG 63
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = +3
Query: 546 PPXXSXPPPKKKTXXPPXFXGGGGGXGFXXPP-PXG 650
PP PP +K PP G G G PP P G
Sbjct: 481 PPGLPGPPGEKGDLGPPGLPGQPGSLGLPGPPGPMG 516
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = +1
Query: 535 FXGXPPXXLXPPQKKKPXXPXXFXGXGGGXXFXXPPPXGGGXFFXLPPQKXGGXXPPXK 711
F G PP + P GGG F PPP G + LPP G P K
Sbjct: 18 FGGATQNSCCPPPQCCGPPPACGNPCGGG--FGPPPPPFGPVGYALPPPPPNGYALPGK 74
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 546 PPXXSXPPPKKKTXXPPXFXGGGGGXGFXXPPPXGGG 656
PP + PP T P G G PPP G G
Sbjct: 36 PPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTG 72
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 546 PPXXSXPPPKKKTXXPPXFXGGGGGXGFXXPPPXGGG 656
PP + PP T P G G PPP G G
Sbjct: 99 PPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTG 135
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 546 PPXXSXPPPKKKTXXPPXFXGGGGGXGFXXPPPXGGG 656
PP + PP T P G G PPP G G
Sbjct: 130 PPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTG 166
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +3
Query: 546 PPXXSXPPPKKKTXXPPXFXGGGGGXGFXXPPPXGGG 656
PP + PP T P G G PPP G G
Sbjct: 254 PPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTG 290
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 643 GGGXKXPXPPPPPKXXGGXXVFFFGGGXXXXGG 545
GGG PPPPP GG GGG GG
Sbjct: 23 GGGGGCCAPPPPPPCGGGC-----GGGAPAAGG 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,313,600
Number of Sequences: 27780
Number of extensions: 182867
Number of successful extensions: 1978
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1636
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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