Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_P18
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0075 - 979335-979954,980136-980405,980949-980989,981563-98...    29   5.1  
07_01_0862 - 7172083-7172931                                           29   5.1  
02_01_0713 - 5332145-5332351,5332675-5332893,5334347-5334559,533...    28   9.0  

>10_01_0075 -
           979335-979954,980136-980405,980949-980989,981563-981663
          Length = 343

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +3

Query: 225 PKXNPXKKXXXFSPPXKKKXXPXXYPPPKKXTXG 326
           P   P  K    SPP  ++  P   PPPKK   G
Sbjct: 165 PPSPPHPKEECISPPLMEENVPVKPPPPKKRQQG 198


>07_01_0862 - 7172083-7172931
          Length = 282

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +3

Query: 222 PPKXNPXKKXXXFSPPXKKKXXPXXYPPP 308
           PP   P KK   F  P   +  P  YPPP
Sbjct: 147 PPPLPPRKKAMLFPLPLPPRKKPLLYPPP 175


>02_01_0713 -
           5332145-5332351,5332675-5332893,5334347-5334559,
           5334637-5334730,5334860-5335020,5335114-5335315,
           5335619-5335784,5336208-5336286
          Length = 446

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -2

Query: 307 GGG*XXGXXFFFXGGEXXXFFFXGXFXGGG 218
           GGG   G   F  GG+   F + G F GGG
Sbjct: 401 GGGGGGGFNPFGGGGQQYTFHYDGGFHGGG 430


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,169,075
Number of Sequences: 37544
Number of extensions: 119432
Number of successful extensions: 266
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)