Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_P17
(1160 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0796 + 6190931-6192745 27 0.26
02_04_0654 - 24755339-24755408,24755488-24755624,24756243-247563... 29 0.28
08_02_1204 - 25267546-25268219,25268319-25268452,25269567-252696... 31 1.3
06_01_1181 + 10148653-10149405 31 1.3
06_01_0606 - 4382133-4382704,4383017-4383336,4384152-4384258,438... 31 1.3
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341... 31 1.7
03_03_0038 + 13984525-13984917,13985351-13985429,13985535-139856... 27 3.0
01_01_0995 + 7875273-7875495,7876196-7876274,7876422-7876536,787... 30 3.0
02_05_0686 - 30900748-30902167,30903442-30904742 24 5.8
01_05_0490 + 22672241-22674679 24 5.9
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 24 6.0
07_03_1382 - 26170563-26170631,26171151-26171843 24 6.5
03_01_0515 - 3864796-3865425 24 6.7
05_01_0131 + 888247-888771,889092-889154 24 6.7
05_01_0225 - 1668176-1668190,1668557-1668570,1669139-1669277,166... 29 7.0
>01_01_0796 + 6190931-6192745
Length = 604
Score = 26.6 bits (56), Expect(2) = 0.26
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 181 PPPPPPPP 204
PPPPPPPP
Sbjct: 196 PPPPPPPP 203
Score = 25.8 bits (54), Expect(2) = 0.26
Identities = 12/39 (30%), Positives = 12/39 (30%)
Frame = +1
Query: 184 PPPPPPPXXXXXXXXXXXXXXXXXXXXWVGGYPLSXXXF 300
PPPPPPP W G PL F
Sbjct: 237 PPPPPPPAAGGSLWIPELPPPPVEGSPWAGLLPLRPPRF 275
>02_04_0654 -
24755339-24755408,24755488-24755624,24756243-24756326,
24756929-24756944,24758035-24758405
Length = 225
Score = 29.5 bits (63), Expect(2) = 0.28
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 118 GGGXXGGXKKXXXKXXXXXXXPPPPPPP 201
GGG G K+ PPPPPPP
Sbjct: 12 GGGTLGKRKERDRPSSEEQRAPPPPPPP 39
Score = 23.0 bits (47), Expect(2) = 0.28
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 181 PPPPPPPP 204
P PPPPPP
Sbjct: 62 PMPPPPPP 69
>08_02_1204 -
25267546-25268219,25268319-25268452,25269567-25269661,
25270289-25270304,25270635-25270684,25270960-25271331
Length = 446
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 121 GGXXGGXKKXXXKXXXXXXXPPPPPPP 201
GG GG K K PPPPPPP
Sbjct: 76 GGGRGGGGKNKGKGVAAAAPPPPPPPP 102
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 118 GGGXXGGXKKXXXKXXXXXXXPPPPPPPP 204
GGG GG K PPPPPPPP
Sbjct: 76 GGGRGGGGKNKGK--GVAAAAPPPPPPPP 102
>06_01_1181 + 10148653-10149405
Length = 250
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 118 GGGXXGGXKKXXXKXXXXXXXPPPPPPPP 204
GGG GG PPPPPPPP
Sbjct: 123 GGGSGGGGGGGRGAAAAPAVVPPPPPPPP 151
>06_01_0606 -
4382133-4382704,4383017-4383336,4384152-4384258,
4384339-4384512,4384956-4385204,4386831-4386986
Length = 525
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 118 GGGXXGGXKKXXXKXXXXXXXPPPPPPPP 204
GG GG K PPPPPPPP
Sbjct: 21 GGEEDGGPLSKRAKAGVQMPAPPPPPPPP 49
>06_02_0257 -
13533689-13533714,13533799-13533925,13534013-13534121,
13534193-13534272,13534758-13534979,13536070-13536318,
13537032-13537484,13539834-13540556
Length = 662
Score = 31.1 bits (67), Expect = 1.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 118 GGGXXGGXKKXXXKXXXXXXXPPPPPPPP 204
GGG GG ++ + PPPPPPPP
Sbjct: 45 GGG--GGDRRGGFQLPPDAAPPPPPPPPP 71
>03_03_0038 +
13984525-13984917,13985351-13985429,13985535-13985628,
13985712-13985844
Length = 232
Score = 26.6 bits (56), Expect(2) = 3.0
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 181 PPPPPPPP 204
PPPPPPPP
Sbjct: 80 PPPPPPPP 87
Score = 22.2 bits (45), Expect(2) = 3.0
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +1
Query: 133 GGXKKXXXKXXXXXXXPPPPPP 198
GG ++ PPPPPP
Sbjct: 23 GGGRRKKAGRRGEAKPPPPPPP 44
>01_01_0995 +
7875273-7875495,7876196-7876274,7876422-7876536,
7878507-7878761
Length = 223
Score = 30.3 bits (65), Expect = 3.0
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -1
Query: 203 GGGGGGGGXXXXXXFFXXXFFXPPXXPPP 117
GGGGGGGG + F PP PPP
Sbjct: 14 GGGGGGGGGGGGGEY--GTFQGPPSYPPP 40
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 203 GGGGGGGGXXXXXXFFXXXFFXPPXXPPPXXXP 105
GGGGGGGG F PP PP P
Sbjct: 16 GGGGGGGGGGGEYGTFQGPPSYPPPRPPVVGYP 48
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 181 PPPPPPP 201
PPPPPPP
Sbjct: 313 PPPPPPP 319
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 181 PPPPPPP 201
PPPPPPP
Sbjct: 326 PPPPPPP 332
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 184 PPPPPPP 204
PPPPPPP
Sbjct: 326 PPPPPPP 332
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 184 PPPPPPP 204
PPPPPPP
Sbjct: 364 PPPPPPP 370
>01_05_0490 + 22672241-22674679
Length = 812
Score = 23.8 bits (49), Expect(2) = 5.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 181 PPPPPPP 201
PPPPPPP
Sbjct: 641 PPPPPPP 647
Score = 23.8 bits (49), Expect(2) = 9.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 181 PPPPPPP 201
PPPPPPP
Sbjct: 664 PPPPPPP 670
Score = 23.8 bits (49), Expect(2) = 5.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 184 PPPPPPP 204
PPPPPPP
Sbjct: 664 PPPPPPP 670
Score = 23.0 bits (47), Expect(2) = 9.8
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +1
Query: 133 GGXKKXXXKXXXXXXXPPPPPP 198
GG K PPPPPP
Sbjct: 626 GGSKSRRIHSVAPPQPPPPPPP 647
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 23.8 bits (49), Expect(2) = 6.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 181 PPPPPPP 201
PPPPPPP
Sbjct: 54 PPPPPPP 60
Score = 23.8 bits (49), Expect(2) = 6.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 184 PPPPPPP 204
PPPPPPP
Sbjct: 92 PPPPPPP 98
>07_03_1382 - 26170563-26170631,26171151-26171843
Length = 253
Score = 23.8 bits (49), Expect(2) = 6.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 181 PPPPPPP 201
PPPPPPP
Sbjct: 184 PPPPPPP 190
Score = 23.8 bits (49), Expect(2) = 6.5
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 184 PPPPPPP 204
PPPPPPP
Sbjct: 200 PPPPPPP 206
>03_01_0515 - 3864796-3865425
Length = 209
Score = 23.8 bits (49), Expect(2) = 6.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 181 PPPPPPP 201
PPPPPPP
Sbjct: 71 PPPPPPP 77
Score = 23.8 bits (49), Expect(2) = 6.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 184 PPPPPPP 204
PPPPPPP
Sbjct: 89 PPPPPPP 95
>05_01_0131 + 888247-888771,889092-889154
Length = 195
Score = 23.8 bits (49), Expect(2) = 6.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 181 PPPPPPP 201
PPPPPPP
Sbjct: 133 PPPPPPP 139
Score = 23.8 bits (49), Expect(2) = 6.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 184 PPPPPPP 204
PPPPPPP
Sbjct: 160 PPPPPPP 166
>05_01_0225 -
1668176-1668190,1668557-1668570,1669139-1669277,
1669398-1669520,1669710-1669940
Length = 173
Score = 29.1 bits (62), Expect = 7.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 203 GGGGGGGGXXXXXXFFXXXFFXPPXXPPP 117
GGGGGGGG PP PPP
Sbjct: 14 GGGGGGGGAASEASGVAGGGSSPPHPPPP 42
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,717,497
Number of Sequences: 37544
Number of extensions: 377897
Number of successful extensions: 17856
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9188
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3538190388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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