Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_P17
(1160 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 31 1.6
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 31 1.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 2.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 24 5.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 24 5.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 24 5.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 24 5.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 8.3
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +1
Query: 103 GGXXXGGGXXGGXKKXXXKXXXXXXXPPPPPP 198
GG GGG GG + PPPPPP
Sbjct: 12 GGGGGGGGGGGGGGEAGYSGGAGVEAPPPPPP 43
Score = 29.5 bits (63), Expect = 4.7
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = -1
Query: 203 GGGGGGGGXXXXXXFFXXXFFXPPXXPPPXXXPP 102
GGGGGGGG + P PPP P
Sbjct: 15 GGGGGGGGGGGEAGYSGGAGVEAPPPPPPADAAP 48
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 103 GGXXXGGGXXGGXKKXXXKXXXXXXXPPPPPPPP 204
GG GG GG PPPPPPPP
Sbjct: 40 GGGCGGGCGYGGGGGCGYGGGYGCGIPPPPPPPP 73
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 2.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 103 GGXXXGGGXXGGXKKXXXKXXXXXXXPPPPPPPP 204
GG GG G PPPPPPPP
Sbjct: 278 GGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPP 311
Score = 29.5 bits (63), Expect = 4.7
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Frame = +1
Query: 103 GGXXXGGGXXGGX---KKXXXKXXXXXXXPPPPPPPP 204
GG GGG GG PPPPPPPP
Sbjct: 274 GGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPP 310
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 2.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 103 GGXXXGGGXXGGXKKXXXKXXXXXXXPPPPPPPP 204
GG GG G PPPPPPPP
Sbjct: 278 GGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPP 311
Score = 29.5 bits (63), Expect = 4.7
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Frame = +1
Query: 103 GGXXXGGGXXGGX---KKXXXKXXXXXXXPPPPPPPP 204
GG GGG GG PPPPPPPP
Sbjct: 274 GGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPP 310
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 23.8 bits (49), Expect(2) = 5.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 181 PPPPPPP 201
PPPPPPP
Sbjct: 726 PPPPPPP 732
Score = 23.8 bits (49), Expect(2) = 5.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 181 PPPPPPP 201
PPPPPPP
Sbjct: 742 PPPPPPP 748
Score = 23.8 bits (49), Expect(2) = 5.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 184 PPPPPPP 204
PPPPPPP
Sbjct: 742 PPPPPPP 748
Score = 23.8 bits (49), Expect(2) = 5.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 184 PPPPPPP 204
PPPPPPP
Sbjct: 784 PPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 23.8 bits (49), Expect(2) = 5.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 181 PPPPPPP 201
PPPPPPP
Sbjct: 726 PPPPPPP 732
Score = 23.8 bits (49), Expect(2) = 5.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 181 PPPPPPP 201
PPPPPPP
Sbjct: 742 PPPPPPP 748
Score = 23.8 bits (49), Expect(2) = 5.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 184 PPPPPPP 204
PPPPPPP
Sbjct: 742 PPPPPPP 748
Score = 23.8 bits (49), Expect(2) = 5.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 184 PPPPPPP 204
PPPPPPP
Sbjct: 784 PPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 23.8 bits (49), Expect(2) = 5.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 181 PPPPPPP 201
PPPPPPP
Sbjct: 309 PPPPPPP 315
Score = 23.8 bits (49), Expect(2) = 5.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 181 PPPPPPP 201
PPPPPPP
Sbjct: 325 PPPPPPP 331
Score = 23.8 bits (49), Expect(2) = 5.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 184 PPPPPPP 204
PPPPPPP
Sbjct: 325 PPPPPPP 331
Score = 23.8 bits (49), Expect(2) = 5.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 184 PPPPPPP 204
PPPPPPP
Sbjct: 367 PPPPPPP 373
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 23.8 bits (49), Expect(2) = 5.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 181 PPPPPPP 201
PPPPPPP
Sbjct: 122 PPPPPPP 128
Score = 23.8 bits (49), Expect(2) = 5.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 184 PPPPPPP 204
PPPPPPP
Sbjct: 138 PPPPPPP 144
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 8.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 103 GGXXXGGGXXGGXKKXXXKXXXXXXXPPPPPP 198
GG GGG GG PPPPPP
Sbjct: 28 GGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPP 59
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,716,141
Number of Sequences: 27780
Number of extensions: 162910
Number of successful extensions: 4268
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1877
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3161640774
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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