Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_P09
         (1007 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   6.3  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   8.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   8.3  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 6.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 154 LKFPPXCPFQPVGKGHPNQIGTFP 83
           LK PP  P  P  + HP+Q  T P
Sbjct: 130 LKTPPVRPLLPQQQQHPHQRDTGP 153


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 8.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 817 PPPPPPP 797
           PPPPPPP
Sbjct: 530 PPPPPPP 536


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 8.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 817 PPPPPPP 797
           PPPPPPP
Sbjct: 783 PPPPPPP 789



 Score = 23.8 bits (49), Expect = 8.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 817 PPPPPPP 797
           PPPPPPP
Sbjct: 784 PPPPPPP 790



 Score = 23.8 bits (49), Expect = 8.3
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 817 PPPPPPP 797
           PPPPPPP
Sbjct: 785 PPPPPPP 791


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,286
Number of Sequences: 2352
Number of extensions: 15557
Number of successful extensions: 188
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 110996730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)