Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_P09
(1007 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029541-1|AAH29541.2| 277|Homo sapiens LETM2 protein protein. 32 2.9
AY173945-1|AAO49715.1| 444|Homo sapiens leucine zipper-EF-hand ... 32 2.9
AK058138-1|BAB71680.1| 396|Homo sapiens protein ( Homo sapiens ... 32 2.9
AB209047-1|BAD92284.1| 507|Homo sapiens ELK1, member of ETS onc... 32 3.8
X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulate... 31 6.6
S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear rib... 31 6.6
CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein. 31 6.6
BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear r... 31 6.6
BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear r... 31 6.6
AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear r... 31 6.6
AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear ... 31 6.6
AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear ... 31 6.6
AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear ... 31 6.6
AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear r... 31 6.6
AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear r... 31 6.6
AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear r... 31 6.6
>BC029541-1|AAH29541.2| 277|Homo sapiens LETM2 protein protein.
Length = 277
Score = 32.3 bits (70), Expect = 2.9
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 107 VPLSNRLKGTXGRKFQKPYXFFDPPXTPGKPLNQNKGPL 223
V L+ +LKGT F +P P TP P++ KGP+
Sbjct: 213 VDLAPQLKGTKDEDFIQPPPVTSSPITPSTPISLPKGPI 251
>AY173945-1|AAO49715.1| 444|Homo sapiens leucine zipper-EF-hand
containing transmembrane protein 1-like protein protein.
Length = 444
Score = 32.3 bits (70), Expect = 2.9
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 107 VPLSNRLKGTXGRKFQKPYXFFDPPXTPGKPLNQNKGPL 223
V L+ +LKGT F +P P TP P++ KGP+
Sbjct: 380 VDLAPQLKGTKDEDFIQPPPVASSPITPSTPISLPKGPI 418
>AK058138-1|BAB71680.1| 396|Homo sapiens protein ( Homo sapiens
cDNA FLJ25409 fis, clone TST03074. ).
Length = 396
Score = 32.3 bits (70), Expect = 2.9
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 107 VPLSNRLKGTXGRKFQKPYXFFDPPXTPGKPLNQNKGPL 223
V L+ +LKGT F +P P TP P++ KGP+
Sbjct: 332 VDLAPQLKGTKDEDFIQPPPVTSSPITPSTPISLPKGPI 370
>AB209047-1|BAD92284.1| 507|Homo sapiens ELK1, member of ETS
oncogene family variant protein.
Length = 507
Score = 31.9 bits (69), Expect = 3.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 649 PPPXXXXPPPPPXFXXXGGGG 587
PPP PPPPP GGGG
Sbjct: 3 PPPPPPPPPPPPRNPGLGGGG 23
>X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulated
nuclear protein protein.
Length = 464
Score = 31.1 bits (67), Expect = 6.6
Identities = 13/44 (29%), Positives = 17/44 (38%)
Frame = +1
Query: 472 PPPPQKKKFXXXPPXXXPXXXXKKKXGGGGFXXXXXXXXPPPPP 603
P PP ++ + P P + G GG PPPPP
Sbjct: 272 PMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPP 315
Score = 30.7 bits (66), Expect = 8.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 635 KXPPPPPXXXXGGGGGXXXXXXKXXPPPP 549
+ PPPPP G GG PPPP
Sbjct: 287 RGPPPPPPGRGGRGGSRARNLPLPPPPPP 315
>S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein complex K protein.
Length = 463
Score = 31.1 bits (67), Expect = 6.6
Identities = 13/44 (29%), Positives = 17/44 (38%)
Frame = +1
Query: 472 PPPPQKKKFXXXPPXXXPXXXXKKKXGGGGFXXXXXXXXPPPPP 603
P PP ++ + P P + G GG PPPPP
Sbjct: 272 PMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPP 315
Score = 30.7 bits (66), Expect = 8.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 635 KXPPPPPXXXXGGGGGXXXXXXKXXPPPP 549
+ PPPPP G GG PPPP
Sbjct: 287 RGPPPPPPGRGGRGGSRARNLPLPPPPPP 315
>CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein.
Length = 464
Score = 31.1 bits (67), Expect = 6.6
Identities = 13/44 (29%), Positives = 17/44 (38%)
Frame = +1
Query: 472 PPPPQKKKFXXXPPXXXPXXXXKKKXGGGGFXXXXXXXXPPPPP 603
P PP ++ + P P + G GG PPPPP
Sbjct: 272 PMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPP 315
Score = 30.7 bits (66), Expect = 8.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 635 KXPPPPPXXXXGGGGGXXXXXXKXXPPPP 549
+ PPPPP G GG PPPP
Sbjct: 287 RGPPPPPPGRGGRGGSRARNLPLPPPPPP 315
>BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 31.1 bits (67), Expect = 6.6
Identities = 13/44 (29%), Positives = 17/44 (38%)
Frame = +1
Query: 472 PPPPQKKKFXXXPPXXXPXXXXKKKXGGGGFXXXXXXXXPPPPP 603
P PP ++ + P P + G GG PPPPP
Sbjct: 272 PMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPP 315
Score = 30.7 bits (66), Expect = 8.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 635 KXPPPPPXXXXGGGGGXXXXXXKXXPPPP 549
+ PPPPP G GG PPPP
Sbjct: 287 RGPPPPPPGRGGRGGSRARNLPLPPPPPP 315
>BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 31.1 bits (67), Expect = 6.6
Identities = 13/44 (29%), Positives = 17/44 (38%)
Frame = +1
Query: 472 PPPPQKKKFXXXPPXXXPXXXXKKKXGGGGFXXXXXXXXPPPPP 603
P PP ++ + P P + G GG PPPPP
Sbjct: 272 PMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPP 315
Score = 30.7 bits (66), Expect = 8.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 635 KXPPPPPXXXXGGGGGXXXXXXKXXPPPP 549
+ PPPPP G GG PPPP
Sbjct: 287 RGPPPPPPGRGGRGGSRARNLPLPPPPPP 315
>AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K transcript variant protein.
Length = 464
Score = 31.1 bits (67), Expect = 6.6
Identities = 13/44 (29%), Positives = 17/44 (38%)
Frame = +1
Query: 472 PPPPQKKKFXXXPPXXXPXXXXKKKXGGGGFXXXXXXXXPPPPP 603
P PP ++ + P P + G GG PPPPP
Sbjct: 272 PMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPP 315
Score = 30.7 bits (66), Expect = 8.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 635 KXPPPPPXXXXGGGGGXXXXXXKXXPPPP 549
+ PPPPP G GG PPPP
Sbjct: 287 RGPPPPPPGRGGRGGSRARNLPLPPPPPP 315
>AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 379
Score = 31.1 bits (67), Expect = 6.6
Identities = 13/44 (29%), Positives = 17/44 (38%)
Frame = +1
Query: 472 PPPPQKKKFXXXPPXXXPXXXXKKKXGGGGFXXXXXXXXPPPPP 603
P PP ++ + P P + G GG PPPPP
Sbjct: 248 PMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPP 291
Score = 30.7 bits (66), Expect = 8.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 635 KXPPPPPXXXXGGGGGXXXXXXKXXPPPP 549
+ PPPPP G GG PPPP
Sbjct: 263 RGPPPPPPGRGGRGGSRARNLPLPPPPPP 291
>AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 31.1 bits (67), Expect = 6.6
Identities = 13/44 (29%), Positives = 17/44 (38%)
Frame = +1
Query: 472 PPPPQKKKFXXXPPXXXPXXXXKKKXGGGGFXXXXXXXXPPPPP 603
P PP ++ + P P + G GG PPPPP
Sbjct: 272 PMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPP 315
Score = 30.7 bits (66), Expect = 8.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 635 KXPPPPPXXXXGGGGGXXXXXXKXXPPPP 549
+ PPPPP G GG PPPP
Sbjct: 287 RGPPPPPPGRGGRGGSRARNLPLPPPPPP 315
>AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 31.1 bits (67), Expect = 6.6
Identities = 13/44 (29%), Positives = 17/44 (38%)
Frame = +1
Query: 472 PPPPQKKKFXXXPPXXXPXXXXKKKXGGGGFXXXXXXXXPPPPP 603
P PP ++ + P P + G GG PPPPP
Sbjct: 272 PMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPP 315
Score = 30.7 bits (66), Expect = 8.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 635 KXPPPPPXXXXGGGGGXXXXXXKXXPPPP 549
+ PPPPP G GG PPPP
Sbjct: 287 RGPPPPPPGRGGRGGSRARNLPLPPPPPP 315
>AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 428
Score = 31.1 bits (67), Expect = 6.6
Identities = 13/44 (29%), Positives = 17/44 (38%)
Frame = +1
Query: 472 PPPPQKKKFXXXPPXXXPXXXXKKKXGGGGFXXXXXXXXPPPPP 603
P PP ++ + P P + G GG PPPPP
Sbjct: 237 PMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPP 280
Score = 30.7 bits (66), Expect = 8.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 635 KXPPPPPXXXXGGGGGXXXXXXKXXPPPP 549
+ PPPPP G GG PPPP
Sbjct: 252 RGPPPPPPGRGGRGGSRARNLPLPPPPPP 280
>AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 306
Score = 31.1 bits (67), Expect = 6.6
Identities = 13/44 (29%), Positives = 17/44 (38%)
Frame = +1
Query: 472 PPPPQKKKFXXXPPXXXPXXXXKKKXGGGGFXXXXXXXXPPPPP 603
P PP ++ + P P + G GG PPPPP
Sbjct: 203 PMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPP 246
Score = 30.7 bits (66), Expect = 8.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 635 KXPPPPPXXXXGGGGGXXXXXXKXXPPPP 549
+ PPPPP G GG PPPP
Sbjct: 218 RGPPPPPPGRGGRGGSRARNLPLPPPPPP 246
>AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear
ribonucleoprotein K isoform a variant protein.
Length = 442
Score = 31.1 bits (67), Expect = 6.6
Identities = 13/44 (29%), Positives = 17/44 (38%)
Frame = +1
Query: 472 PPPPQKKKFXXXPPXXXPXXXXKKKXGGGGFXXXXXXXXPPPPP 603
P PP ++ + P P + G GG PPPPP
Sbjct: 250 PMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPP 293
Score = 30.7 bits (66), Expect = 8.8
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 635 KXPPPPPXXXXGGGGGXXXXXXKXXPPPP 549
+ PPPPP G GG PPPP
Sbjct: 265 RGPPPPPPGRGGRGGSRARNLPLPPPPPP 293
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,866,344
Number of Sequences: 237096
Number of extensions: 3572331
Number of successful extensions: 34429
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18016
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13489131544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -