Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_P06
(919 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003485-1|AAO39488.1| 328|Drosophila melanogaster SD13756p pro... 39 0.008
AE014297-4072|AAF56669.1| 463|Drosophila melanogaster CG6066-PA... 39 0.008
AE014298-3022|AAF50904.2| 762|Drosophila melanogaster CG1676-PA... 34 0.24
AY058563-1|AAL13792.1| 652|Drosophila melanogaster LD25239p pro... 33 0.72
AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain ... 33 0.72
AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC... 33 0.72
AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB... 33 0.72
AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA... 33 0.72
AE014296-1420|AAF50445.2| 652|Drosophila melanogaster CG7185-PA... 33 0.72
BT016090-1|AAV36975.1| 1224|Drosophila melanogaster LD41277p pro... 30 5.1
AF245116-1|AAF66981.1| 743|Drosophila melanogaster cactin protein. 30 5.1
AE014298-2134|AAF48446.1| 1224|Drosophila melanogaster CG6227-PA... 30 5.1
AE014134-138|AAF51469.2| 826|Drosophila melanogaster CG2839-PA ... 29 6.8
>BT003485-1|AAO39488.1| 328|Drosophila melanogaster SD13756p
protein.
Length = 328
Score = 39.1 bits (87), Expect = 0.008
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +1
Query: 571 EEEFLDARREERERIGTLGVSAIWGKSPTRP--DDTE 675
+ + ++ARR +R IG GV +WGKSP+RP DD E
Sbjct: 181 DSKAVNARRNQRVLIGEEGVPEVWGKSPSRPETDDVE 217
>AE014297-4072|AAF56669.1| 463|Drosophila melanogaster CG6066-PA
protein.
Length = 463
Score = 39.1 bits (87), Expect = 0.008
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +1
Query: 571 EEEFLDARREERERIGTLGVSAIWGKSPTRP--DDTE 675
+ + ++ARR +R IG GV +WGKSP+RP DD E
Sbjct: 163 DSKAVNARRNQRVLIGEEGVPEVWGKSPSRPETDDVE 199
>AE014298-3022|AAF50904.2| 762|Drosophila melanogaster CG1676-PA
protein.
Length = 762
Score = 34.3 bits (75), Expect = 0.24
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 400 RERSKDRTER-HRDKYKEPERPRRDYDRGKSSYREH 504
RER KDR R HRDK ++ +R R+ D+ + REH
Sbjct: 79 REREKDRDHRDHRDKERD-QRREREKDKSRDKKREH 113
>AY058563-1|AAL13792.1| 652|Drosophila melanogaster LD25239p
protein.
Length = 652
Score = 32.7 bits (71), Expect = 0.72
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 397 SRERSKDRTERHRDKYKEPERPR-RDYDRGKSSYREHN 507
SR+R + T R+R++ +E ER R R+ +R SYRE +
Sbjct: 534 SRQRRERSTSRYRERSRERERDRDRERERDGGSYRERS 571
>AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain
protein SMRTER protein.
Length = 3469
Score = 32.7 bits (71), Expect = 0.72
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +1
Query: 400 RERSKDRTERHRDKYKEPERPRRDYDRGK---SSYREHN 507
RER + ER R++ +E ER RR+ DR + + REH+
Sbjct: 2745 REREQRERERERERERERERERREQDRARRVVAEEREHD 2783
>AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC,
isoform C protein.
Length = 3604
Score = 32.7 bits (71), Expect = 0.72
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +1
Query: 400 RERSKDRTERHRDKYKEPERPRRDYDRGK---SSYREHN 507
RER + ER R++ +E ER RR+ DR + + REH+
Sbjct: 2880 REREQRERERERERERERERERREQDRARRVVAEEREHD 2918
>AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB,
isoform B protein.
Length = 3604
Score = 32.7 bits (71), Expect = 0.72
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +1
Query: 400 RERSKDRTERHRDKYKEPERPRRDYDRGK---SSYREHN 507
RER + ER R++ +E ER RR+ DR + + REH+
Sbjct: 2880 REREQRERERERERERERERERREQDRARRVVAEEREHD 2918
>AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA,
isoform A protein.
Length = 3604
Score = 32.7 bits (71), Expect = 0.72
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +1
Query: 400 RERSKDRTERHRDKYKEPERPRRDYDRGK---SSYREHN 507
RER + ER R++ +E ER RR+ DR + + REH+
Sbjct: 2880 REREQRERERERERERERERERREQDRARRVVAEEREHD 2918
>AE014296-1420|AAF50445.2| 652|Drosophila melanogaster CG7185-PA
protein.
Length = 652
Score = 32.7 bits (71), Expect = 0.72
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 397 SRERSKDRTERHRDKYKEPERPR-RDYDRGKSSYREHN 507
SR+R + T R+R++ +E ER R R+ +R SYRE +
Sbjct: 534 SRQRRERSTSRYRERSRERERDRDRERERDGGSYRERS 571
>BT016090-1|AAV36975.1| 1224|Drosophila melanogaster LD41277p
protein.
Length = 1224
Score = 29.9 bits (64), Expect = 5.1
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 400 RERSKDRTERHRDKYKEPERPR-RDYDRGKSSYRE 501
R+R K+R ER ++K +E E+ R RD DR + RE
Sbjct: 117 RQREKER-EREKEKEREKEKERERDKDRERDRQRE 150
Score = 29.5 bits (63), Expect = 6.8
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Frame = +1
Query: 400 RERSKDRTERHRDKYKEPERPR----RDYDRGKS 489
RER +DR ER RD+ +E + RDYD GKS
Sbjct: 17 RERERDR-ERERDRDRERDNRHDSRSRDYDMGKS 49
>AF245116-1|AAF66981.1| 743|Drosophila melanogaster cactin protein.
Length = 743
Score = 29.9 bits (64), Expect = 5.1
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 400 RERSKDRTER-HRDKYKEPERPRRDYDRGKSSYRE 501
RER KDR R HRDK ++ +R R+ D+ + R+
Sbjct: 37 REREKDRDHRDHRDKERD-QRREREKDKSRDKKRD 70
>AE014298-2134|AAF48446.1| 1224|Drosophila melanogaster CG6227-PA
protein.
Length = 1224
Score = 29.9 bits (64), Expect = 5.1
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 400 RERSKDRTERHRDKYKEPERPR-RDYDRGKSSYRE 501
R+R K+R ER ++K +E E+ R RD DR + RE
Sbjct: 117 RQREKER-EREKEKEREKEKERERDKDRERDRQRE 150
Score = 29.5 bits (63), Expect = 6.8
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Frame = +1
Query: 400 RERSKDRTERHRDKYKEPERPR----RDYDRGKS 489
RER +DR ER RD+ +E + RDYD GKS
Sbjct: 17 RERERDR-ERERDRDRERDNRHDSRSRDYDMGKS 49
>AE014134-138|AAF51469.2| 826|Drosophila melanogaster CG2839-PA
protein.
Length = 826
Score = 29.5 bits (63), Expect = 6.8
Identities = 18/71 (25%), Positives = 27/71 (38%)
Frame = +1
Query: 400 RERSKDRTERHRDKYKEPERPRRDYDRGKSSYREHNXXXXXXXXXXXXXXXXRYKPQEEE 579
RE K + E R+K + E RR+ +R + R R + ++ E
Sbjct: 541 REEEKRKEEERREKERRDEERRREEERRREEERRREEERRREEERRREEERRREEERKRE 600
Query: 580 FLDARREERER 612
R EER R
Sbjct: 601 EERRREEERRR 611
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,334,016
Number of Sequences: 53049
Number of extensions: 371955
Number of successful extensions: 1090
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4505424660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -