Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_P05
(959 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC107740-1|AAI07741.1| 281|Homo sapiens E2F transcription facto... 31 8.2
BC008348-1|AAH08348.1| 281|Homo sapiens E2F transcription facto... 31 8.2
AY551350-1|AAT02640.1| 206|Homo sapiens E2F6 splice variant e p... 31 8.2
AY551349-1|AAT02639.1| 206|Homo sapiens E2F6 splice variant d p... 31 8.2
AY551348-1|AAT02638.1| 206|Homo sapiens E2F6 splice variant c p... 31 8.2
AY551347-1|AAT02637.1| 249|Homo sapiens E2F6 splice variant b p... 31 8.2
AY551346-1|AAT02636.1| 281|Homo sapiens E2F6 splice variant a p... 31 8.2
AY083997-2|AAM10784.1| 206|Homo sapiens E2F transcription facto... 31 8.2
AY083997-1|AAM10785.1| 281|Homo sapiens E2F transcription facto... 31 8.2
AY083996-1|AAM10783.1| 206|Homo sapiens E2F transcription facto... 31 8.2
AK223407-1|BAD97127.1| 281|Homo sapiens E2F transcription facto... 31 8.2
AK223159-1|BAD96879.1| 271|Homo sapiens E2F transcription facto... 31 8.2
AJ493061-1|CAD37950.1| 281|Homo sapiens transcription factor E2... 31 8.2
AF059292-1|AAC31426.1| 281|Homo sapiens transcriptional repress... 31 8.2
AF041381-1|AAC14694.1| 275|Homo sapiens putative transcriptiona... 31 8.2
AC099344-2|AAY14826.1| 281|Homo sapiens unknown protein. 31 8.2
>BC107740-1|AAI07741.1| 281|Homo sapiens E2F transcription factor 6
protein.
Length = 281
Score = 30.7 bits (66), Expect = 8.2
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 164 KRKMRKEKMSIIFRDKLYDKIIRSCVD*IFDLLDDKES 277
++K+++E + + D++I+ C +F+L DDKE+
Sbjct: 140 QKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKEN 177
>BC008348-1|AAH08348.1| 281|Homo sapiens E2F transcription factor 6
protein.
Length = 281
Score = 30.7 bits (66), Expect = 8.2
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 164 KRKMRKEKMSIIFRDKLYDKIIRSCVD*IFDLLDDKES 277
++K+++E + + D++I+ C +F+L DDKE+
Sbjct: 140 QKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKEN 177
>AY551350-1|AAT02640.1| 206|Homo sapiens E2F6 splice variant e
protein.
Length = 206
Score = 30.7 bits (66), Expect = 8.2
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 164 KRKMRKEKMSIIFRDKLYDKIIRSCVD*IFDLLDDKES 277
++K+++E + + D++I+ C +F+L DDKE+
Sbjct: 65 QKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKEN 102
>AY551349-1|AAT02639.1| 206|Homo sapiens E2F6 splice variant d
protein.
Length = 206
Score = 30.7 bits (66), Expect = 8.2
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 164 KRKMRKEKMSIIFRDKLYDKIIRSCVD*IFDLLDDKES 277
++K+++E + + D++I+ C +F+L DDKE+
Sbjct: 65 QKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKEN 102
>AY551348-1|AAT02638.1| 206|Homo sapiens E2F6 splice variant c
protein.
Length = 206
Score = 30.7 bits (66), Expect = 8.2
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 164 KRKMRKEKMSIIFRDKLYDKIIRSCVD*IFDLLDDKES 277
++K+++E + + D++I+ C +F+L DDKE+
Sbjct: 65 QKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKEN 102
>AY551347-1|AAT02637.1| 249|Homo sapiens E2F6 splice variant b
protein.
Length = 249
Score = 30.7 bits (66), Expect = 8.2
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 164 KRKMRKEKMSIIFRDKLYDKIIRSCVD*IFDLLDDKES 277
++K+++E + + D++I+ C +F+L DDKE+
Sbjct: 108 QKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKEN 145
>AY551346-1|AAT02636.1| 281|Homo sapiens E2F6 splice variant a
protein.
Length = 281
Score = 30.7 bits (66), Expect = 8.2
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 164 KRKMRKEKMSIIFRDKLYDKIIRSCVD*IFDLLDDKES 277
++K+++E + + D++I+ C +F+L DDKE+
Sbjct: 140 QKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKEN 177
>AY083997-2|AAM10784.1| 206|Homo sapiens E2F transcription factor 6
variant protein.
Length = 206
Score = 30.7 bits (66), Expect = 8.2
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 164 KRKMRKEKMSIIFRDKLYDKIIRSCVD*IFDLLDDKES 277
++K+++E + + D++I+ C +F+L DDKE+
Sbjct: 65 QKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKEN 102
>AY083997-1|AAM10785.1| 281|Homo sapiens E2F transcription factor 6
protein.
Length = 281
Score = 30.7 bits (66), Expect = 8.2
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 164 KRKMRKEKMSIIFRDKLYDKIIRSCVD*IFDLLDDKES 277
++K+++E + + D++I+ C +F+L DDKE+
Sbjct: 140 QKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKEN 177
>AY083996-1|AAM10783.1| 206|Homo sapiens E2F transcription factor 6
variant protein.
Length = 206
Score = 30.7 bits (66), Expect = 8.2
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 164 KRKMRKEKMSIIFRDKLYDKIIRSCVD*IFDLLDDKES 277
++K+++E + + D++I+ C +F+L DDKE+
Sbjct: 65 QKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKEN 102
>AK223407-1|BAD97127.1| 281|Homo sapiens E2F transcription factor 6
isoform 1 variant protein.
Length = 281
Score = 30.7 bits (66), Expect = 8.2
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 164 KRKMRKEKMSIIFRDKLYDKIIRSCVD*IFDLLDDKES 277
++K+++E + + D++I+ C +F+L DDKE+
Sbjct: 140 QKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKEN 177
>AK223159-1|BAD96879.1| 271|Homo sapiens E2F transcription factor 6
isoform 1 variant protein.
Length = 271
Score = 30.7 bits (66), Expect = 8.2
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 164 KRKMRKEKMSIIFRDKLYDKIIRSCVD*IFDLLDDKES 277
++K+++E + + D++I+ C +F+L DDKE+
Sbjct: 130 QKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKEN 167
>AJ493061-1|CAD37950.1| 281|Homo sapiens transcription factor E2F6
protein.
Length = 281
Score = 30.7 bits (66), Expect = 8.2
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 164 KRKMRKEKMSIIFRDKLYDKIIRSCVD*IFDLLDDKES 277
++K+++E + + D++I+ C +F+L DDKE+
Sbjct: 140 QKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKEN 177
>AF059292-1|AAC31426.1| 281|Homo sapiens transcriptional repressor
E2F-6 protein.
Length = 281
Score = 30.7 bits (66), Expect = 8.2
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 164 KRKMRKEKMSIIFRDKLYDKIIRSCVD*IFDLLDDKES 277
++K+++E + + D++I+ C +F+L DDKE+
Sbjct: 140 QKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKEN 177
>AF041381-1|AAC14694.1| 275|Homo sapiens putative transcriptional
repressor E2F-6 protein.
Length = 275
Score = 30.7 bits (66), Expect = 8.2
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 164 KRKMRKEKMSIIFRDKLYDKIIRSCVD*IFDLLDDKES 277
++K+++E + + D++I+ C +F+L DDKE+
Sbjct: 134 QKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKEN 171
>AC099344-2|AAY14826.1| 281|Homo sapiens unknown protein.
Length = 281
Score = 30.7 bits (66), Expect = 8.2
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 164 KRKMRKEKMSIIFRDKLYDKIIRSCVD*IFDLLDDKES 277
++K+++E + + D++I+ C +F+L DDKE+
Sbjct: 140 QKKLQEELSDLSAMEDALDELIKDCAQQLFELTDDKEN 177
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,482,322
Number of Sequences: 237096
Number of extensions: 750268
Number of successful extensions: 700
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12714176638
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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