Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_P03
         (919 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0016 + 110796-110979,111252-111768,111847-112213                 31   1.7  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    30   2.2  
01_06_0823 + 32234588-32234936,32236354-32237093,32237260-322373...    28   9.0  

>02_01_0016 + 110796-110979,111252-111768,111847-112213
          Length = 355

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 19/67 (28%), Positives = 24/67 (35%)
 Frame = +3

Query: 684 PPGSSLVRSPVPTLPLTGXLSXFXPSGSVAXXHNSXXRYLXPXXGXPPPXXXGCXXPXPX 863
           PP  +L  SP+PT P+        P+  +        R L P     PP       P P 
Sbjct: 161 PPALALAPSPIPT-PIIAPPPVSSPAPPLPPLWRRRPRRLPPIWRPTPPSLPVDTMPPPP 219

Query: 864 PTPXXXP 884
           P P   P
Sbjct: 220 PPPPPQP 226


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 12/37 (32%), Positives = 14/37 (37%)
 Frame = +3

Query: 807 PXXGXPPPXXXGCXXPXPXPTPXXXPLXRXXXLXAPP 917
           P    PPP    C  P P P P   P+     +  PP
Sbjct: 585 PPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPP 621


>01_06_0823 + 32234588-32234936,32236354-32237093,32237260-32237343,
            32237909-32239263,32240399-32240460,32240544-32241144,
            32241229-32241310,32241778-32241840
          Length = 1111

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 4/81 (4%)
 Frame = +3

Query: 687  PGSSLVRSPVPTLPL----TGXLSXFXPSGSVAXXHNSXXRYLXPXXGXPPPXXXGCXXP 854
            PGSS   +P   LP        L+ F P GS             P    PPP       P
Sbjct: 927  PGSSFRMNPPAPLPFIPSSVTPLTQF-PGGSAQQSEKRPPPPPPPPNVAPPPFTRQ-DIP 984

Query: 855  XPXPTPXXXPLXRXXXLXAPP 917
             P P+P   P+ +   +  PP
Sbjct: 985  PPPPSPPPLPITQPPSVPPPP 1005


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,148,756
Number of Sequences: 37544
Number of extensions: 319699
Number of successful extensions: 657
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)