Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_O23
         (931 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0655 + 5294905-5296083                                           32   0.75 
01_01_1008 - 7987936-7988628,7988923-7989102                           31   0.99 
06_03_0335 + 19662933-19663334,19663358-19664023                       30   3.0  
06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    29   5.3  
10_08_0223 - 15986763-15987575                                         29   7.0  
01_06_0841 + 32361510-32362178,32362719-32363469,32363671-323638...    29   7.0  
01_01_1201 + 9678893-9679311,9679415-9679721                           29   7.0  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.2  
01_06_0289 + 28233327-28233815                                         28   9.2  

>11_01_0655 + 5294905-5296083
          Length = 392

 Score = 31.9 bits (69), Expect = 0.75
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +2

Query: 662 AAXPDTCPPFSLREAWRFLIAHAVGISVRCXSFAPSWLCARTPXQPTXPLSVLSXI 829
           AA PDT PPFS+ E   +L+A       +    +      R+P +P   L+VLS +
Sbjct: 40  AAGPDTAPPFSVEE---YLVATCGLTGAQALKASKKLSHLRSPAKPDAVLAVLSGV 92


>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 31.5 bits (68), Expect = 0.99
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 717 RKRHASRREKGGQVSGKAAGSEQESARGSXQGETPG 610
           R R   RR  GG+V+G+ A   +   RG+ +GE  G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


>06_03_0335 + 19662933-19663334,19663358-19664023
          Length = 355

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = -2

Query: 783 RAHSQLGANDXHRTEIPTA*AMRKRHASRREKGGQVSGKAAGSEQESARGSXQG 622
           R H  L A   H   +P A   R+R A RR   G+V+  AA +      G+  G
Sbjct: 140 RLHRPLAARPLHVPGVPRAPGARRRAAQRRR--GRVAAAAAAAPVRPVAGAAHG 191


>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/49 (30%), Positives = 19/49 (38%)
 Frame = +1

Query: 514 CWRFSIGSAPLTSITKIDAQVRGGEXRQDYKDTRRFPLXAPSCALLFRP 660
           CWR  +        T  D Q    +    +KD    P   PSC L+F P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIP 331


>10_08_0223 - 15986763-15987575
          Length = 270

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 7/77 (9%)
 Frame = -2

Query: 687 GGQVSGKAAGSEQESARGSXQGE-TPGIFIVLSXFATS--DLSVDFCDARQGGGA----Y 529
           GG   G   GS   +  G  QG    G  I ++   +S  D +  + DA  GGG     +
Sbjct: 142 GGGGGGSNGGSGYGAGAGVGQGAGESGSSIAMAPSPSSGGDYNGGYADAAGGGGGGGGGH 201

Query: 528 GKTPATRPFYGXWPFAG 478
           G  PA  P YG    AG
Sbjct: 202 GGGPAASPSYGVGAGAG 218


>01_06_0841 +
           32361510-32362178,32362719-32363469,32363671-32363865,
           32364353-32364612
          Length = 624

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
 Frame = +2

Query: 644 LSCSDPAAXPDTCPP---FSLRE---AWRFLIAHAVGISVR 748
           +SC+DP    D+CPP   F++ +   AW F I   + +  R
Sbjct: 184 VSCADPMCPHDSCPPAIRFNVEQMYAAWAFKITELISLFQR 224


>01_01_1201 + 9678893-9679311,9679415-9679721
          Length = 241

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = -2

Query: 747 RTEIPTA*AMRKRHASRREKGGQVSGKAAGSEQESAR---GSXQGETPG 610
           R E     A  + HA+RR++ G   G   G+ QESAR   G+ + + PG
Sbjct: 11  RAEAAAHRAADELHAARRDEPGGGGGGMLGTVQESARSLLGAVRDKIPG 59


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 295 NESAN---ARGEAVCVLGALPLPRSLTRCAR 378
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>01_06_0289 + 28233327-28233815
          Length = 162

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -2

Query: 717 RKRHASRREKGGQVSGKA-AGSEQESARG 634
           R+RHA RR KGG  SG    G  +  ARG
Sbjct: 123 RRRHARRRSKGGGGSGDGDCGGLRGGARG 151


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,818,935
Number of Sequences: 37544
Number of extensions: 407580
Number of successful extensions: 1153
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)