Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_O19
         (919 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0070 - 562502-562758,562859-562919                               28   9.0  
09_03_0003 + 11396076-11396386,11398803-11398869,11399194-113996...    28   9.0  

>11_01_0070 - 562502-562758,562859-562919
          Length = 105

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -2

Query: 339 RLLENQLHIQVLTHRICANASLV*EHHCFSQVSNNN 232
           RL+  +LH Q LT  +   A+L   HH ++  SN N
Sbjct: 43  RLIHARLHAQALTLAVLGGAALA--HHYYNPSSNTN 76


>09_03_0003 +
           11396076-11396386,11398803-11398869,11399194-11399698,
           11400903-11401038,11401186-11401257,11401891-11401923,
           11401924-11402047,11402387-11402437,11403437-11403563,
           11404230-11404298,11404369-11404486,11404755-11405151
          Length = 669

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 252 RNSDVLTRGWHSHIFYALRPEYGVDFLTNG 341
           +N+ V T GWH     AL    G+D+L  G
Sbjct: 477 KNAIVQTLGWHDRARIALEAAQGLDYLHTG 506


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,619,376
Number of Sequences: 37544
Number of extensions: 300712
Number of successful extensions: 439
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)