Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_O15
         (947 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical pr...    32   0.69 
Z70756-12|CAA94796.2|  180|Caenorhabditis elegans Hypothetical p...    30   2.1  
AF024502-6|AAB70378.4|  402|Caenorhabditis elegans Hypothetical ...    30   2.1  
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p...    28   8.5  
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p...    28   8.5  
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical...    28   8.5  
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical...    28   8.5  
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ...    28   8.5  
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ...    28   8.5  

>L10990-8|AAB59173.2|  223|Caenorhabditis elegans Hypothetical
           protein C30A5.3 protein.
          Length = 223

 Score = 31.9 bits (69), Expect = 0.69
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 607 YKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIA 729
           Y+  R+F +E    ALL +   +P+TC   +  E W FL A
Sbjct: 71  YEHLRQFCIELNGLALLLQRECIPETCQQMTATEQWIFLCA 111


>Z70756-12|CAA94796.2|  180|Caenorhabditis elegans Hypothetical
           protein T06E4.10 protein.
          Length = 180

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +1

Query: 721 LIAHAVXISVRCXSFAPSWAVCTNPPFSPTAAPYPVTIVLSPXGRNXYXPGP---PLVTX 891
           L A A    +   +FAP+  V   P  +P  AP PV +  +P     Y P P   P++  
Sbjct: 66  LAAPAYAPGLAAPAFAPAPVVAAAPALAPAYAPAPV-VAAAPAFAPAYAPAPVASPMIAA 124

Query: 892 LP 897
            P
Sbjct: 125 AP 126


>AF024502-6|AAB70378.4|  402|Caenorhabditis elegans Hypothetical
           protein M151.1 protein.
          Length = 402

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/73 (23%), Positives = 30/73 (41%)
 Frame = -3

Query: 828 YRIRRSGRAERGVRAHSPAWSERXTPN*DTYSVSYEKAPRFPKGERRTGIR*AAGSEQES 649
           +R RR     +    H  AW+ R  P    ++ +  K  ++ K E + G     G+E+  
Sbjct: 81  FRYRRMVFGAKDQLKHDKAWNNRSLPQKSRWNQASVKLAQYQKAEEKMGFIKVFGTEEFQ 140

Query: 648 ARGSFQGETPGIF 610
                +G+T   F
Sbjct: 141 NYSKRRGQTRNSF 153


>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
            protein JC8.10b protein.
          Length = 1119

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +1

Query: 766  APSWAVCTNP--PFSPTAAPYPVTIVLSPXGRNXYXPGPPLV 885
            +P  A   NP    +P+ AP P TI L P       PGPP V
Sbjct: 1057 SPPQACLFNPFTQSAPSPAPPPSTIPLPPTRGASVGPGPPAV 1098


>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
            protein JC8.10a protein.
          Length = 1113

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +1

Query: 766  APSWAVCTNP--PFSPTAAPYPVTIVLSPXGRNXYXPGPPLV 885
            +P  A   NP    +P+ AP P TI L P       PGPP V
Sbjct: 1051 SPPQACLFNPFTQSAPSPAPPPSTIPLPPTRGASVGPGPPAV 1092


>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
            protein JC8.10b protein.
          Length = 1119

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +1

Query: 766  APSWAVCTNP--PFSPTAAPYPVTIVLSPXGRNXYXPGPPLV 885
            +P  A   NP    +P+ AP P TI L P       PGPP V
Sbjct: 1057 SPPQACLFNPFTQSAPSPAPPPSTIPLPPTRGASVGPGPPAV 1098


>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
            protein JC8.10a protein.
          Length = 1113

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +1

Query: 766  APSWAVCTNP--PFSPTAAPYPVTIVLSPXGRNXYXPGPPLV 885
            +P  A   NP    +P+ AP P TI L P       PGPP V
Sbjct: 1051 SPPQACLFNPFTQSAPSPAPPPSTIPLPPTRGASVGPGPPAV 1092


>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
            UNC-26B protein.
          Length = 1113

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +1

Query: 766  APSWAVCTNP--PFSPTAAPYPVTIVLSPXGRNXYXPGPPLV 885
            +P  A   NP    +P+ AP P TI L P       PGPP V
Sbjct: 1051 SPPQACLFNPFTQSAPSPAPPPSTIPLPPTRGASVGPGPPAV 1092


>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
            UNC-26A protein.
          Length = 1119

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +1

Query: 766  APSWAVCTNP--PFSPTAAPYPVTIVLSPXGRNXYXPGPPLV 885
            +P  A   NP    +P+ AP P TI L P       PGPP V
Sbjct: 1057 SPPQACLFNPFTQSAPSPAPPPSTIPLPPTRGASVGPGPPAV 1098


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,562,341
Number of Sequences: 27780
Number of extensions: 418473
Number of successful extensions: 1120
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)