Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_O13
(937 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.002
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 32 0.10
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 31 0.18
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 31 0.18
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 31 0.31
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.31
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 28 1.6
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 28 2.2
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 28 2.2
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 27 2.9
SPAC26A3.08 |smb1|smb|Sm snRNP core protein Smb1|Schizosaccharom... 27 2.9
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 27 3.8
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 5.0
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 27 5.0
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 6.6
SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 26 6.6
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 38.3 bits (85), Expect = 0.002
Identities = 34/122 (27%), Positives = 34/122 (27%), Gaps = 8/122 (6%)
Frame = +3
Query: 561 TPPTPXXXXXGXWAPXPXP-PXXEPRXRXXXWGXXXXPPPXGGXRXPPQIGGVXXXXKPX 737
TPP P AP P P P E G P P G P KP
Sbjct: 1049 TPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPS 1108
Query: 738 EKXRP-------PXGPXPXKXAPXXGVXXXXPPPPGKXXTKXPPPXSXGDTPAXXKKTXA 896
P P P P AP V PP P P P G P A
Sbjct: 1109 VAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAA 1168
Query: 897 PP 902
PP
Sbjct: 1169 PP 1170
Score = 32.3 bits (70), Expect = 0.10
Identities = 30/114 (26%), Positives = 30/114 (26%), Gaps = 3/114 (2%)
Frame = +3
Query: 603 PXPXPPXXEPRXRXXXWGXXXXPPPXGGXRXPPQIGGVXXXXKPXEKXRPPXGPXPXKXA 782
P P P P P P G P V P PP P P A
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP--SVAAPPVPVPSGAPPV-PKPSVAA 1149
Query: 783 PXXGVXXXXPPPPGKXXTKXP-PPXSXGDTPAXXKKTXAPPXXP--XXPPXXXP 935
P PP P P P S G P PP P PP P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 29.9 bits (64), Expect = 0.54
Identities = 31/123 (25%), Positives = 34/123 (27%)
Frame = +3
Query: 567 PTPXXXXXGXWAPXPXPPXXEPRXRXXXWGXXXXPPPXGGXRXPPQIGGVXXXXKPXEKX 746
P P AP PP +P P P G P V P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSV-----AAPPVPVPSGAPPVPKP--SVAAPPVPAPSG 1157
Query: 747 RPPXGPXPXKXAPXXGVXXXXPPPPGKXXTKXPPPXSXGDTPAXXKKTXAPPXXPXXPPX 926
PP P P AP PP K PP + P K + P P PP
Sbjct: 1158 APPV-PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP--PVPPPS 1214
Query: 927 XXP 935
P
Sbjct: 1215 TAP 1217
Score = 29.1 bits (62), Expect = 0.94
Identities = 21/82 (25%), Positives = 25/82 (30%), Gaps = 4/82 (4%)
Frame = +3
Query: 669 PPPXGGXRXPPQIGGVXXXXKPXE---KXRPPXGPXPXKXAPXXGVXXXXPPPPGKXXTK 839
P P PP + P K PP P + PP K +K
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSK 1020
Query: 840 XPP-PXSXGDTPAXXKKTXAPP 902
PP P D P + APP
Sbjct: 1021 APPVPLPSADAPPIPVPSTAPP 1042
Score = 28.7 bits (61), Expect = 1.2
Identities = 24/100 (24%), Positives = 26/100 (26%)
Frame = +3
Query: 603 PXPXPPXXEPRXRXXXWGXXXXPPPXGGXRXPPQIGGVXXXXKPXEKXRPPXGPXPXKXA 782
P P P P P P G+ KP PP P P +
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGV-PPV-PPPSEAP 1198
Query: 783 PXXGVXXXXPPPPGKXXTKXPPPXSXGDTPAXXKKTXAPP 902
P PP P P S G P APP
Sbjct: 1199 PVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 26.6 bits (56), Expect = 5.0
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Frame = +3
Query: 732 PXEKXRPPXGPXPXKXAPXXGVXXXXPPPPGKXXTKXPP-PXSXGDTPAXXKKTXAP 899
P + P P P AP V PP P T PP P S P+ AP
Sbjct: 1015 PKLSSKAPPVPLPSADAPPIPVPSTAPPVP--IPTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 25.8 bits (54), Expect = 8.8
Identities = 21/91 (23%), Positives = 23/91 (25%)
Frame = +3
Query: 603 PXPXPPXXEPRXRXXXWGXXXXPPPXGGXRXPPQIGGVXXXXKPXEKXRPPXGPXPXKXA 782
P P P P G P P G P KP P P P
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP--SVGVPPVPPPSTAP 1217
Query: 783 PXXGVXXXXPPPPGKXXTKXPPPXSXGDTPA 875
P PP P P P + P+
Sbjct: 1218 PVPTPSAGLPPVPVPTAKAPPVPAPSSEAPS 1248
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 32.3 bits (70), Expect = 0.10
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 96 YCFAAVALCNMAVSYIIVPETKGLSNSQIQDVFL 197
Y FAA LC + ++ ETKGL+ +I +++L
Sbjct: 435 YIFAACNLCAACIIFLFAHETKGLTLEEINELYL 468
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 31.5 bits (68), Expect = 0.18
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 96 YCFAAVALCNMAVSYIIVPETKGLSNSQIQDVFL 197
Y FAA LC + ++ ETKGL+ +I ++++
Sbjct: 435 YIFAACNLCAACIIFLFAHETKGLTLEEINELYI 468
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 96 YCFAAVALCNMAVSYIIVPETKGLSNSQIQDVFL 197
Y FAA LC + ++ ETKGL+ +I ++L
Sbjct: 437 YVFAACNLCAAIIIFLFAKETKGLTLEEINQLYL 470
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 30.7 bits (66), Expect = 0.31
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 96 YCFAAVALCNMAVSYIIVPETKGLSNSQIQDVFL 197
Y FA+ LC V+++ E+KGL+ +I +++L
Sbjct: 435 YIFASCNLCASIVTFLFAHESKGLTLEEINELYL 468
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.31
Identities = 30/116 (25%), Positives = 34/116 (29%), Gaps = 2/116 (1%)
Frame = +3
Query: 561 TPPTPXXXXXGXWAPXPXPPXXEPRXRXXXWGXXXXPP-PXGGXRXPPQIGGVXXXXK-P 734
TPP P AP PP P G PP P PP G+ P
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSL---PMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470
Query: 735 XEKXRPPXGPXPXKXAPXXGVXXXXPPPPGKXXTKXPPPXSXGDTPAXXKKTXAPP 902
PP P P AP + P G+ S G +K A P
Sbjct: 471 PAAPAPPPAPAPAPAAPVASI-AELPQQDGRANLMASIRASGGMDLLKSRKVSASP 525
Score = 28.3 bits (60), Expect = 1.6
Identities = 21/82 (25%), Positives = 23/82 (28%), Gaps = 1/82 (1%)
Frame = +3
Query: 669 PPPXGGXRXPPQIG-GVXXXXKPXEKXRPPXGPXPXKXAPXXGVXXXXPPPPGKXXTKXP 845
PPP R P IG G P P P G PPPP +
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGR 374
Query: 846 PPXSXGDTPAXXKKTXAPPXXP 911
P + A PP P
Sbjct: 375 QPPPLSSSRAVSNPPAPPPAIP 396
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +3
Query: 750 PPXGPXPXKX-APXXGVXXXXPPPPGKXXTKXPPP 851
P P P AP G PPPPG PPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 25.8 bits (54), Expect = 8.8
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +3
Query: 747 RPPXGPXPXKXAPXXGVXXXXPPPPGKXXTKXPPPXSXGDTPAXXKKTXAPPXXPXXPP 923
+ P P P P PPP PPP P PP P PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP-----PPPPGVAGAGPPPPPPPPP 783
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 638 GPGFXGXXXGXGGPXTXXXXPGGGGGF 558
G GF G G GGP GG GGF
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGF 213
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -3
Query: 671 GXXXGPPPXXPGPGFXGXXXGX--GGPXTXXXXPGGGGG 561
G GP GPG G G GGP PGG GG
Sbjct: 232 GFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -3
Query: 671 GXXXGPPPXXPGPGFXGXXXGXGGPXTXXXXPGGGGG 561
G GPPP PG G G GG GG GG
Sbjct: 195 GGSGGPPPG---PGGFGGFGGFGGEGHHHGGHGGFGG 228
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +3
Query: 42 ILIIFSYMTTLVGIH--GVFYCFAAVALCNMAVSYIIVPETKGLSNSQIQDVFLK 200
++I S++T + I G F FA + SY PE G+S I + K
Sbjct: 482 LIISASFLTMMESITPTGTFALFAGFCFVGLVTSYFTYPELAGMSIENIHKLLEK 536
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 96 YCFAAVALCNMAVSYIIVPETKGLSNSQIQDVFL 197
Y FA+ L V ++ ETKGL+ +I ++++
Sbjct: 439 YVFASCNLTGAIVIFLFAKETKGLTLEEINELYM 472
>SPAC26A3.08 |smb1|smb|Sm snRNP core protein
Smb1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 147
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Frame = +3
Query: 753 PXGPXPXKXA-PXXGVXXXXPPPPGKXXTKXPPP 851
P G P A P GV PPPP PPP
Sbjct: 109 PLGQAPVGLAGPVRGVGYTAPPPPAGFGRGAPPP 142
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = +3
Query: 813 PPPGKXXTKXPPPXSXGDTPAXXKKTXAPPXXPXXPP 923
PPP PP S P ++T PP PP
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPP 242
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +3
Query: 813 PPPGKXXTKXPPPXSXGDTPAXXKKTXAPPXXPXXP 920
PP T PPP S P+ PP P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 25.8 bits (54), Expect = 8.8
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +3
Query: 768 PXKXAPXXGVXXXXPPPPGKXXTKXPPPXSXGDTPAXXKKTXAPPXXPXXPP 923
P AP PPPP PPP S PA PP P
Sbjct: 1694 PQSAAPPQMSAPTPPPPP----MSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 26.6 bits (56), Expect = 5.0
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 33 FLKILIIF--SYMTTLVGIHGVFYCFAAVALCNMAVSYIIVPETKGLSNSQIQDVF 194
F LI F ++T +G Y FA+ L A+ ++ V ETKG + +I ++
Sbjct: 383 FWNFLISFFTPFITNSIGFK-YGYIFASCNLTGAAIIFLFVHETKGRTLEEINTMY 437
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/57 (28%), Positives = 19/57 (33%)
Frame = +3
Query: 750 PPXGPXPXKXAPXXGVXXXXPPPPGKXXTKXPPPXSXGDTPAXXKKTXAPPXXPXXP 920
PP P A + PPPP T PP S P + + P P P
Sbjct: 908 PPPPPTASMTASAPAIAS--PPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTPVAP 962
>SPAC23H3.05c |swd1||COMPASS complex subunit
Swd1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 26.2 bits (55), Expect = 6.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 97 TASRQWLCVIWPL 135
TASR W C++W L
Sbjct: 83 TASRDWKCILWDL 95
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,349,919
Number of Sequences: 5004
Number of extensions: 35379
Number of successful extensions: 143
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 475330268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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