Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_O12
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       31   1.7  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           30   2.2  
04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476     30   2.9  
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066     30   2.9  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    29   3.9  
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647     29   3.9  
05_01_0142 - 940421-940701,941262-941574                               29   5.2  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +1

Query: 454 PPPPGXXXX*XGPPPPXXGXXXPP 525
           PPPPG       PPPP  G   PP
Sbjct: 367 PPPPGGKKGGPPPPPPKGGASRPP 390



 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = -2

Query: 913 PXXGXPXPPXLVHRGVXEXPPPXPGGKNAXXXP 815
           P  G P PP    +G    PPP PGGK     P
Sbjct: 349 PAKGPPPPPP--PKGPSPPPPPPPGGKKGGPPP 379


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
 Frame = -2

Query: 913 PXXGXPXPPXLVHRGVXEXPPP-XPGGKNAXXXP 815
           P  G P PP    RG    PPP  PGG  A   P
Sbjct: 366 PGPGPPPPPGAAGRGGGGPPPPALPGGPRARGPP 399


>04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476
          Length = 676

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = +1

Query: 454 PPPPGXXXX*XGPPPPXXGXXXPPQXG 534
           PPPPG       PPPP      PP+ G
Sbjct: 503 PPPPGGNAPSWVPPPPQPRGIAPPEYG 529


>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
          Length = 646

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/27 (48%), Positives = 13/27 (48%)
 Frame = +1

Query: 454 PPPPGXXXX*XGPPPPXXGXXXPPQXG 534
           PPPPG       PPPP  G   PP  G
Sbjct: 447 PPPPGSSMY--NPPPPAPGQATPPPYG 471


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -2

Query: 904  GXPXPPXLVHRGVXEXPPPXPGGKNAXXXPXXXGL 800
            G P PP  +  GV   PPP PGG+     P   G+
Sbjct: 1203 GAPAPP--MPPGVPGGPPPPPGGRGLPAPPGGRGV 1235



 Score = 29.1 bits (62), Expect = 5.2
 Identities = 14/39 (35%), Positives = 14/39 (35%)
 Frame = +1

Query: 454  PPPPGXXXX*XGPPPPXXGXXXPPQXGDXXGKXXXPXGG 570
            PPPP       G PP   G   PP      G    P GG
Sbjct: 1185 PPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGG 1223



 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/40 (35%), Positives = 14/40 (35%)
 Frame = +1

Query: 454  PPPPGXXXX*XGPPPPXXGXXXPPQXGDXXGKXXXPXGGG 573
            PPPP       GPP P      P   G   G    P G G
Sbjct: 1186 PPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRG 1225


>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
          Length = 252

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 22/72 (30%), Positives = 27/72 (37%)
 Frame = +3

Query: 492 PXPXXRKXXPPPXXGXXGKEXFXXRGGKXXYPQKGGXPRKKNWPXPXKSPQXXKGXLXGX 671
           P P  +   P P  G   K      G K   P+ G  P+ K  P P   P+  K    G 
Sbjct: 161 PKPKPKPSPPKPKPGPKPKPP--KPGPKPKPPKPGPKPKPKP-PKPGPKPK-PKPPKPGP 216

Query: 672 XPKXXPPXQXFP 707
            PK  PP   +P
Sbjct: 217 KPKPGPPQPWWP 228


>05_01_0142 - 940421-940701,941262-941574
          Length = 197

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 16/39 (41%), Positives = 16/39 (41%)
 Frame = +1

Query: 454 PPPPGXXXX*XGPPPPXXGXXXPPQXGDXXGKXXXPXGG 570
           PPPPG      G  PP  G   PPQ G        P GG
Sbjct: 48  PPPPGAYPPPPGAYPPPPG-AYPPQHGYPQPGGYPPPGG 85


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,580,745
Number of Sequences: 37544
Number of extensions: 238282
Number of successful extensions: 816
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)