BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_O08
(916 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT025823-1|ABF85723.1| 81|Drosophila melanogaster IP05417p pro... 89 1e-17
AE014296-657|AAF47770.2| 122|Drosophila melanogaster CG12012-PA... 89 1e-17
AE013599-260|AAS64790.2| 1998|Drosophila melanogaster CG33558-PA... 31 1.7
BT016055-1|AAV36940.1| 494|Drosophila melanogaster LP16180p pro... 30 5.1
AY051481-1|AAK92905.1| 468|Drosophila melanogaster GH14316p pro... 30 5.1
AE014297-1628|AAF54900.2| 486|Drosophila melanogaster CG7966-PA... 30 5.1
>BT025823-1|ABF85723.1| 81|Drosophila melanogaster IP05417p
protein.
Length = 81
Score = 88.6 bits (210), Expect = 1e-17
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = +1
Query: 418 VGACPACRVGILEDDFTCLGILCAILFFPLGILCCLALKNRRCSNCGAMF 567
+G CPACR+G LED F+ G+ CAI FFPLGILCCLA++ +RCSNCG +F
Sbjct: 32 IGGCPACRIGYLEDTFSACGLCCAIFFFPLGILCCLAMREKRCSNCGTVF 81
>AE014296-657|AAF47770.2| 122|Drosophila melanogaster CG12012-PA
protein.
Length = 122
Score = 88.6 bits (210), Expect = 1e-17
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = +1
Query: 418 VGACPACRVGILEDDFTCLGILCAILFFPLGILCCLALKNRRCSNCGAMF 567
+G CPACR+G LED F+ G+ CAI FFPLGILCCLA++ +RCSNCG +F
Sbjct: 73 IGGCPACRIGYLEDTFSACGLCCAIFFFPLGILCCLAMREKRCSNCGTVF 122
>AE013599-260|AAS64790.2| 1998|Drosophila melanogaster CG33558-PA
protein.
Length = 1998
Score = 31.5 bits (68), Expect = 1.7
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -1
Query: 325 PEVVEEKVHLAD*MPVGMYVVEXPGGTAAEYGGGCSVTVG 206
P+ EE +H A + +Y E PGG + GGGCS ++G
Sbjct: 238 PQASEELIHDAK-ASINLYP-ESPGGGSGSQGGGCSNSLG 275
>BT016055-1|AAV36940.1| 494|Drosophila melanogaster LP16180p
protein.
Length = 494
Score = 29.9 bits (64), Expect = 5.1
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 776 ISLGLHVILFPISTISPHPSIDPDFLMDF 862
+S G H++L + T++ S++ DFL+DF
Sbjct: 436 VSQGGHIVLIDVDTVNGGISLNEDFLVDF 464
>AY051481-1|AAK92905.1| 468|Drosophila melanogaster GH14316p
protein.
Length = 468
Score = 29.9 bits (64), Expect = 5.1
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 776 ISLGLHVILFPISTISPHPSIDPDFLMDF 862
+S G H++L + T++ S++ DFL+DF
Sbjct: 410 VSQGGHIVLIDVDTVNGGISLNEDFLVDF 438
>AE014297-1628|AAF54900.2| 486|Drosophila melanogaster CG7966-PA
protein.
Length = 486
Score = 29.9 bits (64), Expect = 5.1
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 776 ISLGLHVILFPISTISPHPSIDPDFLMDF 862
+S G H++L + T++ S++ DFL+DF
Sbjct: 428 VSQGGHIVLIDVDTVNGGISLNEDFLVDF 456
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,607,872
Number of Sequences: 53049
Number of extensions: 740452
Number of successful extensions: 2433
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2414
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4484945457
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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