Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_O07
(940 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomy... 158 9e-40
SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein L7|... 152 6e-38
SPAC664.06 |rpl703|rpl7|60S ribosomal protein L7|Schizosaccharom... 146 5e-36
SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces... 29 0.95
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 27 3.8
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 26 6.7
>SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 251
Score = 158 bits (384), Expect = 9e-40
Identities = 85/195 (43%), Positives = 114/195 (58%)
Frame = +2
Query: 191 SKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERD 370
SK+ PES+LK + +++++ KK+ I KRAE Y EYR ER+
Sbjct: 10 SKEQIFAPESLLKKKKTQEQSREQRVAAAAEKKAAQQKKRELIAKRAESYDAEYRKAERE 69
Query: 371 EIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINXGVFVRLNK 550
+I L R+AR GNYYVP E KL FVIRIRGIN + PK RK++QL RL QIN GVFV+ NK
Sbjct: 70 QIELGRKARAEGNYYVPDETKLVFVIRIRGINNIPPKARKIMQLLRLIQINNGVFVKFNK 129
Query: 551 ATVNMLRXAEPYXAWGYPNLKSVP*VXIQTWIXQAEWTXVYQSLPTALFEKRLHKHNXIC 730
AT ML+ EPY +G PNLK+V + + + + S A+ E L K++ +
Sbjct: 130 ATKEMLQVVEPYVTYGIPNLKTVRELLYKRGFGKVNKQRIALS-DNAIIEAALGKYSILS 188
Query: 731 VEDLXPEIFXXGXXF 775
+EDL EI+ G F
Sbjct: 189 IEDLIHEIYTVGPNF 203
Score = 31.1 bits (67), Expect = 0.23
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = +3
Query: 603 PT*RVSRELXYKRGFXKLSGXPYT---NHFQXPCLRRGSINXXXXXXXXXXXXXXXXEXX 773
P + REL YKRGF K++ N L + SI +
Sbjct: 147 PNLKTVRELLYKRGFGKVNKQRIALSDNAIIEAALGKYSILSIEDLIHEIYTVGPNFKQA 206
Query: 774 SVRE*FLWPFKLXNPTGGW 830
+ F+WPF+L +P GGW
Sbjct: 207 AN---FIWPFQLSSPLGGW 222
>SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 250
Score = 152 bits (369), Expect = 6e-38
Identities = 81/188 (43%), Positives = 110/188 (58%)
Frame = +2
Query: 212 PESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRLARQ 391
PES+LK + +++S+ KK+ I KRAE Y EYR ER++I LAR+
Sbjct: 16 PESLLKKTKAQKQSREQIVAAAAEKKSARQKKRELIAKRAEAYEAEYRAAEREQIELARK 75
Query: 392 ARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINXGVFVRLNKATVNMLR 571
AR GNY+VP E KL FV+RIRGIN + PK RK++QL RL QIN G+FV+ NKA ML+
Sbjct: 76 ARAEGNYFVPHEPKLIFVVRIRGINNIPPKARKIMQLLRLLQINNGIFVKFNKAIKEMLQ 135
Query: 572 XAEPYXAWGYPNLKSVP*VXIQTWIXQAEWTXVYQSLPTALFEKRLHKHNXICVEDLXPE 751
EPY +G PN K+V + + + + S A+ E L K++ + VEDL E
Sbjct: 136 VVEPYVTYGIPNHKTVRELIYKRGFGKVNKQRIPLS-DNAIIEAALGKYSILSVEDLIHE 194
Query: 752 IFXXGXXF 775
I+ G F
Sbjct: 195 IYTVGPNF 202
Score = 33.9 bits (74), Expect = 0.033
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +3
Query: 603 PT*RVSRELXYKRGFXKLSGX--PYT-NHFQXPCLRRGSINXXXXXXXXXXXXXXXXEXX 773
P + REL YKRGF K++ P + N L + SI +
Sbjct: 146 PNHKTVRELIYKRGFGKVNKQRIPLSDNAIIEAALGKYSILSVEDLIHEIYTVGPNFKQA 205
Query: 774 SVRE*FLWPFKLXNPTGGW 830
+ FLWPFKL +P GGW
Sbjct: 206 AN---FLWPFKLSSPLGGW 221
>SPAC664.06 |rpl703|rpl7|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 146 bits (353), Expect = 5e-36
Identities = 76/188 (40%), Positives = 109/188 (57%)
Frame = +2
Query: 212 PESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRLARQ 391
PE +LK ++ + ++ + K ++E FKRAE ++ YR +ER+ IRL R
Sbjct: 15 PEVLLKKRKVNERTRKERVEQAIAKKEAQKKNRKETFKRAETFINNYRQRERERIRLNRS 74
Query: 392 ARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRLRQINXGVFVRLNKATVNMLR 571
A+N+G+ +VP E KL FVIRI G+ + PK+RKVL+L RL +IN VFVR NKA MLR
Sbjct: 75 AKNKGDIFVPDETKLLFVIRIAGVKNMPPKIRKVLRLLRLSRINNAVFVRNNKAVAQMLR 134
Query: 572 XAEPYXAWGYPNLKSVP*VXIQTWIXQAEWTXVYQSLPTALFEKRLHKHNXICVEDLXPE 751
EPY +G PNL SV + + + + S AL E+ L K++ I +ED+ E
Sbjct: 135 IVEPYVMYGIPNLHSVRELIYKRGFGKINGQRIALS-DNALIEEALGKYDVISIEDIIHE 193
Query: 752 IFXXGXXF 775
I+ G F
Sbjct: 194 IYNVGSHF 201
>SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 224
Score = 29.1 bits (62), Expect = 0.95
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +2
Query: 293 SAIKKKREIFKRAEQYVKEYRIKERDEIRLARQARNRGN 409
+++K+ REI ++ E+ +R+K ++ ++ + A N GN
Sbjct: 151 TSLKRNREIIEKEERSSFHFRVKPKNLDKVPKLAENEGN 189
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 392 ARNRGNYYVPGEAKLAFVIRIRGINQVSPKVRKVLQLFRL 511
+ N+G YY G +AFV I G+ + SP++ LQL ++
Sbjct: 1133 SENKGMYY--GLLGIAFVA-IAGVTEFSPELNAKLQLVKM 1169
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 26.2 bits (55), Expect = 6.7
Identities = 9/34 (26%), Positives = 18/34 (52%)
Frame = +2
Query: 326 RAEQYVKEYRIKERDEIRLARQARNRGNYYVPGE 427
+A Q ++ + +RL N+ N+++PGE
Sbjct: 309 KATQMTVDFLVDWAKSVRLCANRFNKSNFFIPGE 342
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,320,593
Number of Sequences: 5004
Number of extensions: 58646
Number of successful extensions: 128
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 122
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 477327454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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