Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_O02
         (1014 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC052955-1|AAH52955.1|  505|Homo sapiens Wiskott-Aldrich syndrom...    31   5.0  
AM295156-1|CAL26602.1|  505|Homo sapiens WASL protein protein.         31   5.0  
AC006333-1|AAQ96857.1|  505|Homo sapiens unknown protein.              31   5.0  
D88460-1|BAA20128.1|  505|Homo sapiens N-WASP protein.                 31   6.7  

>BC052955-1|AAH52955.1|  505|Homo sapiens Wiskott-Aldrich
           syndrome-like protein.
          Length = 505

 Score = 31.5 bits (68), Expect = 5.0
 Identities = 19/66 (28%), Positives = 22/66 (33%)
 Frame = +3

Query: 438 PPPRTPXPRXXXPXXAEXLPXRGGXXFPXQLXGYPREQXXPPKXQXXAXTLHXPXSRXVX 617
           PPP  P P    P      P RG    P      P     PP     +  +  P    + 
Sbjct: 287 PPPPPPPPHNSGPPPP---PARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMY 343

Query: 618 PXPPPA 635
           P PPPA
Sbjct: 344 PPPPPA 349


>AM295156-1|CAL26602.1|  505|Homo sapiens WASL protein protein.
          Length = 505

 Score = 31.5 bits (68), Expect = 5.0
 Identities = 19/66 (28%), Positives = 22/66 (33%)
 Frame = +3

Query: 438 PPPRTPXPRXXXPXXAEXLPXRGGXXFPXQLXGYPREQXXPPKXQXXAXTLHXPXSRXVX 617
           PPP  P P    P      P RG    P      P     PP     +  +  P    + 
Sbjct: 287 PPPPPPPPHNSGPPPP---PARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMY 343

Query: 618 PXPPPA 635
           P PPPA
Sbjct: 344 PPPPPA 349


>AC006333-1|AAQ96857.1|  505|Homo sapiens unknown protein.
          Length = 505

 Score = 31.5 bits (68), Expect = 5.0
 Identities = 19/66 (28%), Positives = 22/66 (33%)
 Frame = +3

Query: 438 PPPRTPXPRXXXPXXAEXLPXRGGXXFPXQLXGYPREQXXPPKXQXXAXTLHXPXSRXVX 617
           PPP  P P    P      P RG    P      P     PP     +  +  P    + 
Sbjct: 287 PPPPPPPPHNSGPPPP---PARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMY 343

Query: 618 PXPPPA 635
           P PPPA
Sbjct: 344 PPPPPA 349


>D88460-1|BAA20128.1|  505|Homo sapiens N-WASP protein.
          Length = 505

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 19/66 (28%), Positives = 22/66 (33%)
 Frame = +3

Query: 438 PPPRTPXPRXXXPXXAEXLPXRGGXXFPXQLXGYPREQXXPPKXQXXAXTLHXPXSRXVX 617
           PPP  P P    P      P RG    P      P     PP     +  +  P    + 
Sbjct: 287 PPPPPPPPHSSGPPPP---PARGRGAPPPPPSRAPTAAPPPPPPSRPSVEVPPPPPNRMY 343

Query: 618 PXPPPA 635
           P PPPA
Sbjct: 344 PPPPPA 349


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,161,778
Number of Sequences: 237096
Number of extensions: 1054929
Number of successful extensions: 2381
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2328
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13599698196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)