Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_N24
         (919 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70780-13|CAD18872.2|  368|Caenorhabditis elegans Hypothetical p...    75   5e-14
Z70780-12|CAA94820.2|  329|Caenorhabditis elegans Hypothetical p...    75   5e-14
AC006776-7|AAF60623.1|  361|Caenorhabditis elegans Serpentine re...    31   1.5  
AC006795-4|AAK84612.2|  430|Caenorhabditis elegans Hypothetical ...    29   3.5  
Z78414-3|CAD60425.1|  309|Caenorhabditis elegans Hypothetical pr...    28   8.1  
U80931-1|AAB37998.2|  343|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z70780-13|CAD18872.2|  368|Caenorhabditis elegans Hypothetical
           protein F46B6.3b protein.
          Length = 368

 Score = 75.4 bits (177), Expect = 5e-14
 Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
 Frame = +2

Query: 236 KIILRRLPPTMTEETFLEQVSPIPEHDY-FYFAKPDPTLGNNLFSRAYINFVNVEDIFL- 409
           K++LRRLP  MTE   LEQ+SP+PE     YF   + +     ++   +NF    D  + 
Sbjct: 10  KVVLRRLPKYMTEHEVLEQISPLPEEVIGTYFHPANFSFDRCAYATLTVNFSEYCDSMME 69

Query: 410 FRDKFDGYVFLDEKGGEYVGIVEYAP---FQRISXXXXXXDPKCGTLESDPIYQEFIESL 580
           F  +FDGY+F+D +G +   +VE A    F +        D + G + +D  Y +F + L
Sbjct: 70  FERRFDGYIFVDSRGNDSAAVVEAASNQNFAKCDRNRMKEDTRVGAILTDKYYLDFCKKL 129

Query: 581 NKDPEVESQPKLEYSYPINDVSEKKTQ----STPLLEY 682
            ++  +      +    +N   + +TQ     TPL++Y
Sbjct: 130 EEERAIPILTLEQQIRKLNQPDDARTQIDKMETPLVKY 167


>Z70780-12|CAA94820.2|  329|Caenorhabditis elegans Hypothetical
           protein F46B6.3a protein.
          Length = 329

 Score = 75.4 bits (177), Expect = 5e-14
 Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
 Frame = +2

Query: 236 KIILRRLPPTMTEETFLEQVSPIPEHDY-FYFAKPDPTLGNNLFSRAYINFVNVEDIFL- 409
           K++LRRLP  MTE   LEQ+SP+PE     YF   + +     ++   +NF    D  + 
Sbjct: 10  KVVLRRLPKYMTEHEVLEQISPLPEEVIGTYFHPANFSFDRCAYATLTVNFSEYCDSMME 69

Query: 410 FRDKFDGYVFLDEKGGEYVGIVEYAP---FQRISXXXXXXDPKCGTLESDPIYQEFIESL 580
           F  +FDGY+F+D +G +   +VE A    F +        D + G + +D  Y +F + L
Sbjct: 70  FERRFDGYIFVDSRGNDSAAVVEAASNQNFAKCDRNRMKEDTRVGAILTDKYYLDFCKKL 129

Query: 581 NKDPEVESQPKLEYSYPINDVSEKKTQ----STPLLEY 682
            ++  +      +    +N   + +TQ     TPL++Y
Sbjct: 130 EEERAIPILTLEQQIRKLNQPDDARTQIDKMETPLVKY 167


>AC006776-7|AAF60623.1|  361|Caenorhabditis elegans Serpentine
           receptor, class w protein100 protein.
          Length = 361

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
 Frame = -1

Query: 499 NSLEGCIFNYAYIFST---FFI*ENITVKFISEQKNIFHV 389
           NS+    FN+A+IFS    +F   N+ + F+S   N FH+
Sbjct: 2   NSIHNTPFNFAHIFSDIGYYFHIINVVLSFVSVLMNTFHI 41


>AC006795-4|AAK84612.2|  430|Caenorhabditis elegans Hypothetical
           protein Y50D4B.4 protein.
          Length = 430

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 344 TLGNNLFSRAYINFVNVEDIFLFRDKFD 427
           T  NN F R Y+N    EDI +F+ K D
Sbjct: 383 TFFNNAFHRLYLNITLDEDIQIFKTKLD 410


>Z78414-3|CAD60425.1|  309|Caenorhabditis elegans Hypothetical
           protein W09D12.3 protein.
          Length = 309

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
 Frame = -1

Query: 667 C*LCFFFTNIIYWVRIF*--FRLALNLRIFVQTLDKLLINWVTLKCSTFRI--FLLFFL* 500
           C +CFFF       +     F   + + IFV  +   + +W+ ++   F I    L FL 
Sbjct: 17  CLMCFFFCLPFVDRKNLSNPFYRLVQIDIFVN-ITCYINSWLAIRLEYFEIGRTFLIFLE 75

Query: 499 NSLEGCIFNYAYIFSTFFI*ENITVKFI 416
           +SL GC+       S +F  +N+T  F+
Sbjct: 76  SSLPGCLTLSKLFVSLYFHLQNVTGLFL 103


>U80931-1|AAB37998.2|  343|Caenorhabditis elegans Hypothetical
           protein T01B11.1 protein.
          Length = 343

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 607 LALNLRIFVQTLDKLLINWVTLKCSTFRIFLLFF 506
           L   L +F+       INW+ L   T R F+LF+
Sbjct: 78  LVCKLELFISNSAACFINWIWLCLFTQRFFILFY 111


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,705,817
Number of Sequences: 27780
Number of extensions: 355701
Number of successful extensions: 800
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)