Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_N21
(895 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0906 + 32886693-32886919,32887589-32887708,32887978-328881... 149 3e-36
03_06_0576 + 34832900-34832911,34833006-34833122,34833752-348338... 58 1e-08
03_02_0078 + 5476288-5476626,5477474-5477670,5477750-5477885,547... 47 2e-05
08_01_0011 - 81673-81724,81826-82161,82426-82556,82629-82729,828... 34 0.18
02_02_0367 + 9496893-9497022,9498262-9498442,9498519-9498660,949... 31 1.6
05_03_0453 - 14223012-14223175,14223956-14223992,14224171-142243... 30 2.2
09_04_0097 - 14573499-14574110,14574977-14575017,14575424-145756... 29 3.8
02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148... 29 3.8
02_02_0109 + 6830802-6833412,6833491-6833861 29 5.0
06_03_0181 + 17618888-17619125,17621503-17621683,17621765-176219... 29 6.6
02_03_0293 - 17372071-17372217,17372301-17372471,17373334-173734... 25 7.3
01_01_0075 - 575806-576984,578024-578278 28 8.7
>01_06_0906 +
32886693-32886919,32887589-32887708,32887978-32888101,
32888224-32888361,32888492-32888701,32889085-32889232,
32890452-32890801,32890909-32890963,32891087-32891382,
32891480-32891531,32891740-32891947,32892064-32892446,
32894102-32894538,32895452-32895643
Length = 979
Score = 149 bits (361), Expect = 3e-36
Identities = 84/197 (42%), Positives = 111/197 (56%), Gaps = 22/197 (11%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEET-------- 418
MGI GL+P ++ V G TVA+D+Y WLHKGA +C D+L +G T
Sbjct: 1 MGIQGLLPQLKSIMAPIGVEALKGQTVAVDTYSWLHKGALSCGDRLCKGLPTTRFGSGDL 60
Query: 419 --------------DMHIKYCLKYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNI 556
D HI+YC+ V ML +KPILVFDG HLP K E+KR SR
Sbjct: 61 PPFLGTQGFLIHFADWHIEYCMHRVNMLRHHGVKPILVFDGGHLPMKGDQETKRERSRKE 120
Query: 557 SKKRAAELLSLGKIEEARSYLRRSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYL 736
+ +RA E S G A +++VDIT +A +LI+ ++ VD IVAPYEADAQ+ +L
Sbjct: 121 NLERAKEHESAGNSRAAFECYQKAVDITPRIAFELIQVLKQEKVDYIVAPYEADAQMTFL 180
Query: 737 NIKNIAQLVITEDSDLI 787
++ + VITEDSDLI
Sbjct: 181 SVNKLVDAVITEDSDLI 197
>03_06_0576 +
34832900-34832911,34833006-34833122,34833752-34833810,
34833901-34833960,34834197-34834250,34834332-34834380,
34834493-34834540,34834889-34834954,34835591-34835641,
34835732-34835851,34835921-34836005,34836428-34836509,
34836666-34836774,34837005-34837051,34837131-34837188,
34839114-34839220,34839700-34839765,34839833-34839879,
34839977-34840042,34840146-34840243,34840344-34840469,
34840551-34840835,34840920-34840985,34841079-34841228
Length = 675
Score = 57.6 bits (133), Expect = 1e-08
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 9/190 (4%)
Frame = +2
Query: 263 MGITGLIPFIEK----ASRRTDVSEFSGCTVAIDSYCWLHKGAFACADK---LVRGE--E 415
MGI GL + + A+ R V ++ G VAID+ +++ K ++ E E
Sbjct: 1 MGIKGLTKLLAEHAPGAAVRRRVEDYRGRVVAIDTSLSIYQFLIVVGRKGTEVLTNEAGE 60
Query: 416 TDMHIKYCLKYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGK 595
H++ L +L IKP+ VFDG K +KR R+ S + + +G
Sbjct: 61 VTSHLQGMLNRTVRILEAGIKPVFVFDGEPPDMKKKELAKRSLKRDGSSEDLNRAIEVGD 120
Query: 596 IEEARSYLRRSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITED 775
+ + +R+V +T D + M V + AP EA+AQ A L + + +ED
Sbjct: 121 EDLIEKFSKRTVKVTKKHNEDCKRLLSLMGVPVVQAPGEAEAQCAALCENHKVFAIASED 180
Query: 776 SDLILLDVLR 805
D + R
Sbjct: 181 MDSLTFGARR 190
>03_02_0078 +
5476288-5476626,5477474-5477670,5477750-5477885,
5478055-5478132,5478227-5478280,5478466-5478650,
5478781-5480374,5480506-5480700,5480753-5480904,
5481213-5481486,5481597-5481733,5482219-5482258,
5482773-5483261,5483605-5484168
Length = 1477
Score = 47.2 bits (107), Expect = 2e-05
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEET-DMHIKYC 439
MG+ GL + RR V +G +A+D+ W+ + A D +G+ D H+
Sbjct: 1 MGVHGLWELLAPVGRRVSVETLAGKRLAVDASIWMVQFMRAMRDD--KGDMIRDAHLLGF 58
Query: 440 LKYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISK---KRAAELLSLGKIE 601
L+ + LL +P+ VFDG K T + RR R+ ++ ++ AE L L ++
Sbjct: 59 LRRICKLLFLRARPVFVFDGATPALKRRTLAARRRHRDAAQAKVRKTAEKLLLSHLK 115
Score = 42.3 bits (95), Expect = 5e-04
Identities = 26/78 (33%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Frame = +2
Query: 575 ELLSLGKIEEARSYLRRSVDITHAMAL--DLIKECRKM----NVDCIVAPYEADAQLAYL 736
EL L + +E RR ++ +HA ++ ++ EC+++ + I+AP EA+AQ AY+
Sbjct: 827 ELSLLRQEQEYLGNERRKLE-SHAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM 885
Query: 737 NIKNIAQLVITEDSDLIL 790
+ N+ V+T+DSD+ L
Sbjct: 886 EMTNLVDGVVTDDSDVFL 903
>08_01_0011 -
81673-81724,81826-82161,82426-82556,82629-82729,
82849-82931,83154-83253,83366-83513,83664-83723,
84272-84345,84482-84554,84648-84699,84764-84897,
85096-85288,85386-85453
Length = 534
Score = 33.9 bits (74), Expect = 0.18
Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 7/183 (3%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MG+ L +E ++ + V +D CWL + A++ + +++K
Sbjct: 1 MGVKNLWDILESCKKKLPLHHLQNKKVCVDLSCWLVQ--MYSANRSPAFAKDKVYLKNLF 58
Query: 443 KYVTMLLSKNI-------KPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIE 601
+ LL+ N PIL+F L AK + S ++ + + +E + I+
Sbjct: 59 HRIRALLALNCTLLFVTGNPILLFYFSFLAAKESDQPNSHPSISLRRNKGSEFSCM--IK 116
Query: 602 EARSYLRRSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSD 781
EA+ MAL + C+ EA+AQ A L+++++ T DSD
Sbjct: 117 EAKRL---------GMAL---------GIPCLDGLEEAEAQCASLDLESLCDGCFTSDSD 158
Query: 782 LIL 790
L
Sbjct: 159 AFL 161
>02_02_0367 +
9496893-9497022,9498262-9498442,9498519-9498660,
9498757-9498826,9498920-9499089
Length = 230
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 775 IFSYH*LCYVLYVEVG*LSVCFVWSDNTIYI 683
+ YH L + +V +G L++ F+WS TI+I
Sbjct: 72 VVDYHFLTLISHVLIGVLAILFLWSKATIFI 102
>05_03_0453 -
14223012-14223175,14223956-14223992,14224171-14224312,
14224858-14225038,14225460-14225655
Length = 239
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Frame = -1
Query: 766 YH*LCYVLYVEVG*LSVCFVWSDNTIYIH-----FP-ALLNKIQCHGVSDI 632
YH L + + + L+VCFVW++ +I+ FP A+L+++QC ++ I
Sbjct: 97 YHLLTFFCHSLMVFLTVCFVWANAASFINRGPPKFPDAILSEVQCLKIAHI 147
>09_04_0097 -
14573499-14574110,14574977-14575017,14575424-14575616,
14575697-14575837,14575970-14576197,14576297-14576552,
14576866-14577069,14577157-14577245,14577346-14577416,
14577498-14577579,14577653-14577715,14578018-14578155
Length = 705
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 557 SKKRAAELLSLGKIEEARSYLRRSVDITHAMALDLIKECRKMNVDCIVA 703
S+ AA + ++EE +S+ +++ +A DLI +NV C++A
Sbjct: 611 SEHAAAAAAAGEEVEELKSFDAAFIEVDNATLFDLILAANYLNVPCLLA 659
>02_01_0003 +
13079-13610,14005-14312,14364-14549,14620-14707,
14807-14887,14980-15044,15357-15497,15578-15694,
15995-16237,16326-16383,18127-18224
Length = 638
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +2
Query: 509 PAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLRRSV 631
P+ +TE R S+ +K +A E +S GK+EEA +L +++
Sbjct: 346 PSIDVTEENRDASQE-AKSKAMEAMSEGKLEEAIDHLTKAI 385
>02_02_0109 + 6830802-6833412,6833491-6833861
Length = 993
Score = 29.1 bits (62), Expect = 5.0
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +2
Query: 188 ASN*RVPRPSSVD--KLTSERVLIFVNMGITGLIPFIEKASRRTDVSEFSGCTV--AIDS 355
A N VP P V+ +LT L NM ITG IP + R ++ +FS + I +
Sbjct: 202 AVNPFVPAPFPVEFGRLTRLTYLWLSNMNITGEIPENLSSLRELNLLDFSSNKLQGKIPT 261
Query: 356 YCWLHK 373
+ W HK
Sbjct: 262 WIWQHK 267
>06_03_0181 +
17618888-17619125,17621503-17621683,17621765-17621906,
17622002-17622071,17622162-17622307,17623382-17623948,
17624558-17624641,17624723-17624797,17625049-17625217,
17625395-17625586,17625662-17626053
Length = 751
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 775 IFSYH*LCYVLYVEVG*LSVCFVWSDNTIYI 683
+ YH L + +V +G L++ F+WS T +I
Sbjct: 108 VLDYHLLTLLSHVMIGALAILFLWSKATTFI 138
>02_03_0293 -
17372071-17372217,17372301-17372471,17373334-17373435,
17373803-17374216,17374369-17374512,17374634-17375647
Length = 663
Score = 24.6 bits (51), Expect(2) = 7.3
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 554 ISKKRAAELLSLG-KIEEARSYLRRSVDITHAMALDL 661
+SK++A EL SLG K E + YL S ++ A+DL
Sbjct: 528 VSKRKATELKSLGNKAVEKKDYL--SATGFYSQAVDL 562
Score = 22.2 bits (45), Expect(2) = 7.3
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 641 HAMALDLIKECRKMNVDCIVAPYEADAQLAYL 736
H LD ECRK+ D + A Y A L L
Sbjct: 584 HKALLDAY-ECRKLRPDWLKAYYRQGAALMLL 614
>01_01_0075 - 575806-576984,578024-578278
Length = 477
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 206 PRPSSVDKLTSERVLIFVNMGITGLIP 286
P P+S+ +L+S + L+FV +TG +P
Sbjct: 172 PIPASLGRLSSLQSLVFVENNLTGAVP 198
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,710,795
Number of Sequences: 37544
Number of extensions: 413392
Number of successful extensions: 1088
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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