Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP05_F_N21
(895 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC007491-1|AAH07491.1| 846|Homo sapiens exonuclease 1 protein. 210 7e-54
AL365366-8|CAI15658.1| 846|Homo sapiens exonuclease 1 protein. 210 7e-54
AF549168-1|AAN39382.1| 846|Homo sapiens exonuclease 1 protein. 210 7e-54
AF091754-2|AAC69880.1| 803|Homo sapiens exonuclease Ia protein. 210 7e-54
AF091754-1|AAC69879.1| 846|Homo sapiens exonuclease Ib protein. 210 7e-54
AF091740-1|AAC63043.1| 803|Homo sapiens exonuclease 1a protein. 210 7e-54
AF084974-1|AAD13754.1| 846|Homo sapiens exonuclease I protein. 210 7e-54
AF060479-1|AAC33874.1| 800|Homo sapiens exonuclease I protein. 210 7e-54
AF042282-1|AAC32259.1| 803|Homo sapiens Hex1 protein. 210 7e-54
AC004783-1|AAC32424.1| 803|Homo sapiens Hex1 protein. 210 7e-54
AL365366-5|CAI15655.1| 135|Homo sapiens exonuclease 1 protein. 154 5e-37
AL365366-6|CAI15657.1| 169|Homo sapiens exonuclease 1 protein. 95 4e-35
AL365366-7|CAI15656.1| 166|Homo sapiens exonuclease 1 protein. 87 7e-33
X76771-1|CAA54166.1| 380|Homo sapiens flap endonuclease-1 protein. 60 8e-09
L37374-1|AAA91331.1| 380|Homo sapiens endonuclease protein. 60 8e-09
CR536562-1|CAG38799.1| 380|Homo sapiens FEN1 protein. 60 8e-09
BT019524-1|AAV38331.1| 380|Homo sapiens flap structure-specific... 60 8e-09
BC000323-1|AAH00323.1| 380|Homo sapiens flap structure-specific... 60 8e-09
AF523117-1|AAM74238.1| 380|Homo sapiens flap structure-specific... 60 8e-09
AC004770-3|AAC23394.1| 380|Homo sapiens FEN1_HUMAN protein. 60 8e-09
X69978-1|CAA49598.1| 1186|Homo sapiens XP-G factor protein. 44 6e-04
L20046-1|AAC37533.1| 1186|Homo sapiens excision repair protein p... 44 6e-04
BC031522-1|AAH31522.1| 1186|Homo sapiens excision repair cross-c... 44 6e-04
AL157769-8|CAI14530.1| 1186|Homo sapiens excision repair cross-c... 44 6e-04
AF550128-1|AAN46091.1| 1186|Homo sapiens excision repair cross-c... 44 6e-04
AF462447-1|AAP97715.1| 1186|Homo sapiens excision repair protein... 44 6e-04
AF255442-1|AAF89179.1| 1186|Homo sapiens xeroderma pigmentosum c... 44 6e-04
AF255436-1|AAF89178.1| 232|Homo sapiens xeroderma pigmentosum c... 44 6e-04
AL157769-7|CAI14529.1| 142|Homo sapiens excision repair cross-c... 44 7e-04
D16305-1|BAA03812.1| 1185|Homo sapiens ERCC5 protein. 43 0.001
BC117206-1|AAI17207.1| 908|Homo sapiens hypothetical protein FL... 42 0.002
BC117204-1|AAI17205.1| 908|Homo sapiens hypothetical protein FL... 42 0.002
AK131387-1|BAD18538.1| 908|Homo sapiens protein ( Homo sapiens ... 42 0.002
X71341-1|CAA50481.1| 88|Homo sapiens xeroderma pigmentosum gro... 38 0.049
AB209312-1|BAD92549.1| 1611|Homo sapiens DNA-repair protein comp... 34 0.61
DQ873695-1|ABH09086.1| 910|Homo sapiens PPARgamma constitutive ... 31 4.3
BC012177-1|AAH12177.1| 910|Homo sapiens family with sequence si... 31 4.3
AL157769-9|CAI14531.1| 419|Homo sapiens excision repair cross-c... 31 4.3
AL078605-1|CAI23205.1| 910|Homo sapiens novel protein (KIAA1838... 31 4.3
AL008628-1|CAI19554.1| 910|Homo sapiens novel protein (KIAA1838... 31 4.3
AB058741-1|BAB47467.1| 917|Homo sapiens KIAA1838 protein protein. 31 4.3
>BC007491-1|AAH07491.1| 846|Homo sapiens exonuclease 1 protein.
Length = 846
Score = 210 bits (512), Expect = 7e-54
Identities = 99/175 (56%), Positives = 124/175 (70%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 622
K+V MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 623 RSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLI 787
RS++ITHAMA +IK R VDC+VAPYEADAQLAYLN I Q +ITEDSDL+
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLL 175
>AL365366-8|CAI15658.1| 846|Homo sapiens exonuclease 1 protein.
Length = 846
Score = 210 bits (512), Expect = 7e-54
Identities = 99/175 (56%), Positives = 124/175 (70%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 622
K+V MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 623 RSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLI 787
RS++ITHAMA +IK R VDC+VAPYEADAQLAYLN I Q +ITEDSDL+
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLL 175
>AF549168-1|AAN39382.1| 846|Homo sapiens exonuclease 1 protein.
Length = 846
Score = 210 bits (512), Expect = 7e-54
Identities = 99/175 (56%), Positives = 124/175 (70%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 622
K+V MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 623 RSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLI 787
RS++ITHAMA +IK R VDC+VAPYEADAQLAYLN I Q +ITEDSDL+
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLL 175
>AF091754-2|AAC69880.1| 803|Homo sapiens exonuclease Ia protein.
Length = 803
Score = 210 bits (512), Expect = 7e-54
Identities = 99/175 (56%), Positives = 124/175 (70%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 622
K+V MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 623 RSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLI 787
RS++ITHAMA +IK R VDC+VAPYEADAQLAYLN I Q +ITEDSDL+
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLL 175
>AF091754-1|AAC69879.1| 846|Homo sapiens exonuclease Ib protein.
Length = 846
Score = 210 bits (512), Expect = 7e-54
Identities = 99/175 (56%), Positives = 124/175 (70%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 622
K+V MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 623 RSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLI 787
RS++ITHAMA +IK R VDC+VAPYEADAQLAYLN I Q +ITEDSDL+
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLL 175
>AF091740-1|AAC63043.1| 803|Homo sapiens exonuclease 1a protein.
Length = 803
Score = 210 bits (512), Expect = 7e-54
Identities = 99/175 (56%), Positives = 124/175 (70%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 622
K+V MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 623 RSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLI 787
RS++ITHAMA +IK R VDC+VAPYEADAQLAYLN I Q +ITEDSDL+
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLL 175
>AF084974-1|AAD13754.1| 846|Homo sapiens exonuclease I protein.
Length = 846
Score = 210 bits (512), Expect = 7e-54
Identities = 99/175 (56%), Positives = 124/175 (70%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 622
K+V MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 623 RSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLI 787
RS++ITHAMA +IK R VDC+VAPYEADAQLAYLN I Q +ITEDSDL+
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLL 175
>AF060479-1|AAC33874.1| 800|Homo sapiens exonuclease I protein.
Length = 800
Score = 210 bits (512), Expect = 7e-54
Identities = 99/175 (56%), Positives = 124/175 (70%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 622
K+V MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 623 RSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLI 787
RS++ITHAMA +IK R VDC+VAPYEADAQLAYLN I Q +ITEDSDL+
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLL 175
>AF042282-1|AAC32259.1| 803|Homo sapiens Hex1 protein.
Length = 803
Score = 210 bits (512), Expect = 7e-54
Identities = 99/175 (56%), Positives = 124/175 (70%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 622
K+V MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 623 RSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLI 787
RS++ITHAMA +IK R VDC+VAPYEADAQLAYLN I Q +ITEDSDL+
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLL 175
>AC004783-1|AAC32424.1| 803|Homo sapiens Hex1 protein.
Length = 803
Score = 210 bits (512), Expect = 7e-54
Identities = 99/175 (56%), Positives = 124/175 (70%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 622
K+V MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 623 RSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLI 787
RS++ITHAMA +IK R VDC+VAPYEADAQLAYLN I Q +ITEDSDL+
Sbjct: 121 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLL 175
>AL365366-5|CAI15655.1| 135|Homo sapiens exonuclease 1 protein.
Length = 135
Score = 154 bits (373), Expect = 5e-37
Identities = 72/135 (53%), Positives = 94/135 (69%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD ++ +C+
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 60
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 622
K+V MLLS IKPILVFDG LP+K E RRE R + + +LL GK+ EAR
Sbjct: 61 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 120
Query: 623 RSVDITHAMALDLIK 667
RS++ITHAMA +IK
Sbjct: 121 RSINITHAMAHKVIK 135
>AL365366-6|CAI15657.1| 169|Homo sapiens exonuclease 1 protein.
Length = 169
Score = 95.1 bits (226), Expect(2) = 4e-35
Identities = 48/84 (57%), Positives = 58/84 (69%)
Frame = +2
Query: 536 RRESRNISKKRAAELLSLGKIEEARSYLRRSVDITHAMALDLIKECRKMNVDCIVAPYEA 715
RR N+ K + +LL GK+ EAR RS++ITHAMA +IK R VDC+VAPYEA
Sbjct: 54 RRRQANLLKGK--QLLREGKVSEARECFTRSINITHAMAHKVIKAARSQGVDCLVAPYEA 111
Query: 716 DAQLAYLNIKNIAQLVITEDSDLI 787
DAQLAYLN I Q +ITEDSDL+
Sbjct: 112 DAQLAYLNKAGIVQAIITEDSDLL 135
Score = 74.1 bits (174), Expect(2) = 4e-35
Identities = 31/53 (58%), Positives = 40/53 (75%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETD 421
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTD 53
>AL365366-7|CAI15656.1| 166|Homo sapiens exonuclease 1 protein.
Length = 166
Score = 87.4 bits (207), Expect(2) = 7e-33
Identities = 47/84 (55%), Positives = 56/84 (66%)
Frame = +2
Query: 536 RRESRNISKKRAAELLSLGKIEEARSYLRRSVDITHAMALDLIKECRKMNVDCIVAPYEA 715
RR N+ K + +LL GK+ EAR RS++ITHAMA K R VDC+VAPYEA
Sbjct: 54 RRRQANLLKGK--QLLREGKVSEARECFTRSINITHAMAH---KAARSQGVDCLVAPYEA 108
Query: 716 DAQLAYLNIKNIAQLVITEDSDLI 787
DAQLAYLN I Q +ITEDSDL+
Sbjct: 109 DAQLAYLNKAGIVQAIITEDSDLL 132
Score = 74.1 bits (174), Expect(2) = 7e-33
Identities = 31/53 (58%), Positives = 40/53 (75%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETD 421
MGI GL+ FI++AS V ++ G VA+D+YCWLHKGA ACA+KL +GE TD
Sbjct: 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTD 53
>X76771-1|CAA54166.1| 380|Homo sapiens flap endonuclease-1 protein.
Length = 380
Score = 60.5 bits (140), Expect = 8e-09
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 8/183 (4%)
Frame = +2
Query: 263 MGITGLIPFIE----KASRRTDVSEFSGCTVAIDSYCWLHKGAFAC---ADKLVRGE-ET 418
MGI GL I A R D+ + G VAID+ +++ A D L E ET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 419 DMHIKYCLKYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKI 598
H+ ++ IKP+ VFDG+ K+ +KR E R ++K+ + + G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 599 EEARSYLRRSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDS 778
+E + +R V +T + M + + AP EA+A A L TED
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 779 DLI 787
D +
Sbjct: 181 DCL 183
>L37374-1|AAA91331.1| 380|Homo sapiens endonuclease protein.
Length = 380
Score = 60.5 bits (140), Expect = 8e-09
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 8/183 (4%)
Frame = +2
Query: 263 MGITGLIPFIE----KASRRTDVSEFSGCTVAIDSYCWLHKGAFAC---ADKLVRGE-ET 418
MGI GL I A R D+ + G VAID+ +++ A D L E ET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 419 DMHIKYCLKYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKI 598
H+ ++ IKP+ VFDG+ K+ +KR E R ++K+ + + G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 599 EEARSYLRRSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDS 778
+E + +R V +T + M + + AP EA+A A L TED
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 779 DLI 787
D +
Sbjct: 181 DCL 183
>CR536562-1|CAG38799.1| 380|Homo sapiens FEN1 protein.
Length = 380
Score = 60.5 bits (140), Expect = 8e-09
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 8/183 (4%)
Frame = +2
Query: 263 MGITGLIPFIE----KASRRTDVSEFSGCTVAIDSYCWLHKGAFAC---ADKLVRGE-ET 418
MGI GL I A R D+ + G VAID+ +++ A D L E ET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 419 DMHIKYCLKYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKI 598
H+ ++ IKP+ VFDG+ K+ +KR E R ++K+ + + G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 599 EEARSYLRRSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDS 778
+E + +R V +T + M + + AP EA+A A L TED
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 779 DLI 787
D +
Sbjct: 181 DCL 183
>BT019524-1|AAV38331.1| 380|Homo sapiens flap structure-specific
endonuclease 1 protein.
Length = 380
Score = 60.5 bits (140), Expect = 8e-09
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 8/183 (4%)
Frame = +2
Query: 263 MGITGLIPFIE----KASRRTDVSEFSGCTVAIDSYCWLHKGAFAC---ADKLVRGE-ET 418
MGI GL I A R D+ + G VAID+ +++ A D L E ET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 419 DMHIKYCLKYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKI 598
H+ ++ IKP+ VFDG+ K+ +KR E R ++K+ + + G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 599 EEARSYLRRSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDS 778
+E + +R V +T + M + + AP EA+A A L TED
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 779 DLI 787
D +
Sbjct: 181 DCL 183
>BC000323-1|AAH00323.1| 380|Homo sapiens flap structure-specific
endonuclease 1 protein.
Length = 380
Score = 60.5 bits (140), Expect = 8e-09
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 8/183 (4%)
Frame = +2
Query: 263 MGITGLIPFIE----KASRRTDVSEFSGCTVAIDSYCWLHKGAFAC---ADKLVRGE-ET 418
MGI GL I A R D+ + G VAID+ +++ A D L E ET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 419 DMHIKYCLKYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKI 598
H+ ++ IKP+ VFDG+ K+ +KR E R ++K+ + + G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 599 EEARSYLRRSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDS 778
+E + +R V +T + M + + AP EA+A A L TED
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 779 DLI 787
D +
Sbjct: 181 DCL 183
>AF523117-1|AAM74238.1| 380|Homo sapiens flap structure-specific
endonuclease 1 protein.
Length = 380
Score = 60.5 bits (140), Expect = 8e-09
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 8/183 (4%)
Frame = +2
Query: 263 MGITGLIPFIE----KASRRTDVSEFSGCTVAIDSYCWLHKGAFAC---ADKLVRGE-ET 418
MGI GL I A R D+ + G VAID+ +++ A D L E ET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 419 DMHIKYCLKYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKI 598
H+ ++ IKP+ VFDG+ K+ +KR E R ++K+ + + G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 599 EEARSYLRRSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDS 778
+E + +R V +T + M + + AP EA+A A L TED
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 779 DLI 787
D +
Sbjct: 181 DCL 183
>AC004770-3|AAC23394.1| 380|Homo sapiens FEN1_HUMAN protein.
Length = 380
Score = 60.5 bits (140), Expect = 8e-09
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 8/183 (4%)
Frame = +2
Query: 263 MGITGLIPFIE----KASRRTDVSEFSGCTVAIDSYCWLHKGAFAC---ADKLVRGE-ET 418
MGI GL I A R D+ + G VAID+ +++ A D L E ET
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET 60
Query: 419 DMHIKYCLKYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKI 598
H+ ++ IKP+ VFDG+ K+ +KR E R ++K+ + + G
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 599 EEARSYLRRSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDS 778
+E + +R V +T + M + + AP EA+A A L TED
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 779 DLI 787
D +
Sbjct: 181 DCL 183
>X69978-1|CAA49598.1| 1186|Homo sapiens XP-G factor protein.
Length = 1186
Score = 44.4 bits (100), Expect = 6e-04
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MG+ GL +E + R+ G +A+D WL++ D+ E H+
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENP-HLLTLF 59
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELL-SLGKIEEARSYL 619
+ LL I+PI VFDG K T KRR+ ++++ + + L K R +
Sbjct: 60 HRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAI 119
Query: 620 RRSVDITHAMALDLIKECRKMNVDCIVAP 706
+ + AL + + R+ N D V P
Sbjct: 120 KTAFRSKRDEALPSLTQVRREN-DLYVLP 147
Score = 34.3 bits (75), Expect = 0.61
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 620 RRSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLIL 790
R + +T M L+ + R + I AP EA+AQ A L++ + IT+DSD+ L
Sbjct: 759 RIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWL 815
>L20046-1|AAC37533.1| 1186|Homo sapiens excision repair protein
protein.
Length = 1186
Score = 44.4 bits (100), Expect = 6e-04
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MG+ GL +E + R+ G +A+D WL++ D+ E H+
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENP-HLLTLF 59
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELL-SLGKIEEARSYL 619
+ LL I+PI VFDG K T KRR+ ++++ + + L K R +
Sbjct: 60 HRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAI 119
Query: 620 RRSVDITHAMALDLIKECRKMNVDCIVAP 706
+ + AL + + R+ N D V P
Sbjct: 120 KTAFRSKRDEALPSLTQVRREN-DLYVLP 147
Score = 34.3 bits (75), Expect = 0.61
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 620 RRSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLIL 790
R + +T M L+ + R + I AP EA+AQ A L++ + IT+DSD+ L
Sbjct: 759 RIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWL 815
>BC031522-1|AAH31522.1| 1186|Homo sapiens excision repair
cross-complementing rodent repair deficiency,
complementation g protein.
Length = 1186
Score = 44.4 bits (100), Expect = 6e-04
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MG+ GL +E + R+ G +A+D WL++ D+ E H+
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENP-HLLTLF 59
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELL-SLGKIEEARSYL 619
+ LL I+PI VFDG K T KRR+ ++++ + + L K R +
Sbjct: 60 HRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAI 119
Query: 620 RRSVDITHAMALDLIKECRKMNVDCIVAP 706
+ + AL + + R+ N D V P
Sbjct: 120 KTAFRSKRDEALPSLTQVRREN-DLYVLP 147
Score = 34.3 bits (75), Expect = 0.61
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 620 RRSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLIL 790
R + +T M L+ + R + I AP EA+AQ A L++ + IT+DSD+ L
Sbjct: 759 RIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWL 815
>AL157769-8|CAI14530.1| 1186|Homo sapiens excision repair
cross-complementing rodent repairt protein.
Length = 1186
Score = 44.4 bits (100), Expect = 6e-04
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MG+ GL +E + R+ G +A+D WL++ D+ E H+
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENP-HLLTLF 59
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELL-SLGKIEEARSYL 619
+ LL I+PI VFDG K T KRR+ ++++ + + L K R +
Sbjct: 60 HRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAI 119
Query: 620 RRSVDITHAMALDLIKECRKMNVDCIVAP 706
+ + AL + + R+ N D V P
Sbjct: 120 KTAFRSKRDEALPSLTQVRREN-DLYVLP 147
Score = 34.3 bits (75), Expect = 0.61
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 620 RRSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLIL 790
R + +T M L+ + R + I AP EA+AQ A L++ + IT+DSD+ L
Sbjct: 759 RIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWL 815
>AF550128-1|AAN46091.1| 1186|Homo sapiens excision repair
cross-complementing rodent repair deficiency,
complementation g protein.
Length = 1186
Score = 44.4 bits (100), Expect = 6e-04
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MG+ GL +E + R+ G +A+D WL++ D+ E H+
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENP-HLLTLF 59
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELL-SLGKIEEARSYL 619
+ LL I+PI VFDG K T KRR+ ++++ + + L K R +
Sbjct: 60 HRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAI 119
Query: 620 RRSVDITHAMALDLIKECRKMNVDCIVAP 706
+ + AL + + R+ N D V P
Sbjct: 120 KTAFRSKRDEALPSLTQVRREN-DLYVLP 147
Score = 34.3 bits (75), Expect = 0.61
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 620 RRSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLIL 790
R + +T M L+ + R + I AP EA+AQ A L++ + IT+DSD+ L
Sbjct: 759 RIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWL 815
>AF462447-1|AAP97715.1| 1186|Homo sapiens excision repair protein
ERCC5 protein.
Length = 1186
Score = 44.4 bits (100), Expect = 6e-04
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MG+ GL +E + R+ G +A+D WL++ D+ E H+
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENP-HLLTLF 59
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELL-SLGKIEEARSYL 619
+ LL I+PI VFDG K T KRR+ ++++ + + L K R +
Sbjct: 60 HRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAI 119
Query: 620 RRSVDITHAMALDLIKECRKMNVDCIVAP 706
+ + AL + + R+ N D V P
Sbjct: 120 KTAFRSKRDEALPSLTQVRREN-DLYVLP 147
Score = 34.3 bits (75), Expect = 0.61
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 620 RRSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLIL 790
R + +T M L+ + R + I AP EA+AQ A L++ + IT+DSD+ L
Sbjct: 759 RIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWL 815
>AF255442-1|AAF89179.1| 1186|Homo sapiens xeroderma pigmentosum
complementation group G protein splice variant protein.
Length = 1186
Score = 44.4 bits (100), Expect = 6e-04
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MG+ GL +E + R+ G +A+D WL++ D+ E H+
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENP-HLLTLF 59
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELL-SLGKIEEARSYL 619
+ LL I+PI VFDG K T KRR+ ++++ + + L K R +
Sbjct: 60 HRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAI 119
Query: 620 RRSVDITHAMALDLIKECRKMNVDCIVAP 706
+ + AL + + R+ N D V P
Sbjct: 120 KTAFRSKRDEALPSLTQVRREN-DLYVLP 147
Score = 34.3 bits (75), Expect = 0.61
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 620 RRSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLIL 790
R + +T M L+ + R + I AP EA+AQ A L++ + IT+DSD+ L
Sbjct: 759 RIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWL 815
>AF255436-1|AAF89178.1| 232|Homo sapiens xeroderma pigmentosum
complementation group G protein splice variant protein.
Length = 232
Score = 44.4 bits (100), Expect = 6e-04
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MG+ GL +E + R+ G +A+D WL++ D+ E H+
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENP-HLLTLF 59
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELL-SLGKIEEARSYL 619
+ LL I+PI VFDG K T KRR+ ++++ + + L K R +
Sbjct: 60 HRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAI 119
Query: 620 RRSVDITHAMALDLIKECRKMNVDCIVAP 706
+ + AL + + R+ N D V P
Sbjct: 120 KTAFRSKRDEALPSLTQVRREN-DLYVLP 147
>AL157769-7|CAI14529.1| 142|Homo sapiens excision repair
cross-complementing rodent repairt protein.
Length = 142
Score = 44.0 bits (99), Expect = 7e-04
Identities = 28/99 (28%), Positives = 45/99 (45%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MG+ GL +E + R+ G +A+D WL++ D+ E H+
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIENP-HLLTLF 59
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNIS 559
+ LL I+PI VFDG K T KRR+ ++++
Sbjct: 60 HRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLA 98
>D16305-1|BAA03812.1| 1185|Homo sapiens ERCC5 protein.
Length = 1185
Score = 43.2 bits (97), Expect = 0.001
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MG+ GL +E + R+ G +A+D WL++ D+ E + H
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIE-NPHPLTLF 59
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELL-SLGKIEEARSYL 619
+ LL I+PI VFDG K T KRR+ ++++ + + L K R +
Sbjct: 60 HRLCKLLFFRIRPIFVFDGDAPLLKKQTLVKRRQRKDLASSDSRKTTEKLLKTFLKRQAI 119
Query: 620 RRSVDITHAMALDLIKECRKMNVDCIVAP 706
+ S AL + + R+ N D V P
Sbjct: 120 QTSFRSQRDEALPSLTQVRREN-DLYVLP 147
Score = 34.3 bits (75), Expect = 0.61
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 620 RRSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLIL 790
R + +T M L+ + R + I AP EA+AQ A L++ + IT+DSD+ L
Sbjct: 759 RFAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAVLDLTDQTSGTITDDSDIWL 815
>BC117206-1|AAI17207.1| 908|Homo sapiens hypothetical protein
FLJ40869 protein.
Length = 908
Score = 42.3 bits (95), Expect = 0.002
Identities = 43/176 (24%), Positives = 73/176 (41%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MG+ L +E + + G T+A+D W+ + A K + G H++
Sbjct: 1 MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCE---AQTVKKMMGSVMKPHLRNLF 57
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 622
++ L ++K + V +G KA SKR ++R S ++ G+ +S LR
Sbjct: 58 FRISYLTQMDVKLVFVMEGEPPKLKADVISKRNQTRYGSSGKSWS-QKTGR-SHFKSVLR 115
Query: 623 RSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLIL 790
+ H + EC + + + A EA+A AYLN +T D D L
Sbjct: 116 ---ECLHML------EC--LGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFL 160
>BC117204-1|AAI17205.1| 908|Homo sapiens hypothetical protein
FLJ40869 protein.
Length = 908
Score = 42.3 bits (95), Expect = 0.002
Identities = 43/176 (24%), Positives = 73/176 (41%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MG+ L +E + + G T+A+D W+ + A K + G H++
Sbjct: 1 MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCE---AQTVKKMMGSVMKPHLRNLF 57
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 622
++ L ++K + V +G KA SKR ++R S ++ G+ +S LR
Sbjct: 58 FRISYLTQMDVKLVFVMEGEPPKLKADVISKRNQTRYGSSGKSWS-QKTGR-SHFKSVLR 115
Query: 623 RSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLIL 790
+ H + EC + + + A EA+A AYLN +T D D L
Sbjct: 116 ---ECLHML------EC--LGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFL 160
>AK131387-1|BAD18538.1| 908|Homo sapiens protein ( Homo sapiens
cDNA FLJ16464 fis, clone BRHIP2012360. ).
Length = 908
Score = 42.3 bits (95), Expect = 0.002
Identities = 43/176 (24%), Positives = 73/176 (41%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MG+ L +E + + G T+A+D W+ + A K + G H++
Sbjct: 1 MGVNDLWQILEPVKQHIPLRNLGGKTIAVDLSLWVCE---AQTVKKMMGSVMKPHLRNLF 57
Query: 443 KYVTMLLSKNIKPILVFDGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLR 622
++ L ++K + V +G KA SKR ++R S ++ G+ +S LR
Sbjct: 58 FRISYLTQMDVKLVFVMEGEPPKLKADVISKRNQTRYGSSGKSWS-QKTGR-SHFKSVLR 115
Query: 623 RSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLIL 790
+ H + EC + + + A EA+A AYLN +T D D L
Sbjct: 116 ---ECLHML------EC--LGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFL 160
>X71341-1|CAA50481.1| 88|Homo sapiens xeroderma pigmentosum group
G complementing factor protein.
Length = 88
Score = 37.9 bits (84), Expect = 0.049
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +2
Query: 263 MGITGLIPFIEKASRRTDVSEFSGCTVAIDSYCWLHKGAFACADKLVRGEETDMHIKYCL 442
MG+ GL +E + R+ G +A+D WL++ D+ E + H+
Sbjct: 1 MGVQGLWKLLECSGRQVSPEALEGKILAVDISIWLNQALKGVRDRHGNSIE-NPHLLTLF 59
Query: 443 KYVTMLLSKNIKPILVFDG 499
+ LL I+PI VFDG
Sbjct: 60 HRLCKLLFFRIRPIFVFDG 78
>AB209312-1|BAD92549.1| 1611|Homo sapiens DNA-repair protein
complementing XP-G cells variant protein.
Length = 1611
Score = 34.3 bits (75), Expect = 0.61
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 620 RRSVDITHAMALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLIL 790
R + +T M L+ + R + I AP EA+AQ A L++ + IT+DSD+ L
Sbjct: 1184 RIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWL 1240
>DQ873695-1|ABH09086.1| 910|Homo sapiens PPARgamma constitutive
coactivator-1 protein.
Length = 910
Score = 31.5 bits (68), Expect = 4.3
Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 2/161 (1%)
Frame = +2
Query: 320 SEFSGCT--VAIDSYCWLHKGAFACADKLVRGEETDMHIKYCLKYVTMLLSKNIKPILVF 493
S++ GCT + +D+ C L + + + G + + +V + IK I F
Sbjct: 32 SKYPGCTPTIVVDAMCCLRY--WYTPESWICGGQWREYFSALRDFVKTFTAAGIKLIFFF 89
Query: 494 DGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLRRSVDITHAMALDLIKEC 673
DG K KRR N R + K + R+ I +A+
Sbjct: 90 DGMVEQDKRDEWVKRRLKNNREISRIFHYIKSHKEQPGRNMFF----IPSGLAVFTRFAL 145
Query: 674 RKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILLD 796
+ + + + + EAD ++A +++ ++ ED+D ++ D
Sbjct: 146 KTLGQETLCSLQEADYEVASYGLQHNCLGILGEDTDYLIYD 186
>BC012177-1|AAH12177.1| 910|Homo sapiens family with sequence
similarity 120B protein.
Length = 910
Score = 31.5 bits (68), Expect = 4.3
Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 2/161 (1%)
Frame = +2
Query: 320 SEFSGCT--VAIDSYCWLHKGAFACADKLVRGEETDMHIKYCLKYVTMLLSKNIKPILVF 493
S++ GCT + +D+ C L + + + G + + +V + IK I F
Sbjct: 32 SKYPGCTPTIVVDAMCCLRY--WYTPESWICGGQWREYFSALRDFVKTFTAAGIKLIFFF 89
Query: 494 DGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLRRSVDITHAMALDLIKEC 673
DG K KRR N R + K + R+ I +A+
Sbjct: 90 DGMVEQDKRDEWVKRRLKNNREISRIFHYIKSHKEQPGRNMFF----IPSGLAVFTRFAL 145
Query: 674 RKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILLD 796
+ + + + + EAD ++A +++ ++ ED+D ++ D
Sbjct: 146 KTLGQETLCSLQEADYEVASYGLQHNCLGILGEDTDYLIYD 186
>AL157769-9|CAI14531.1| 419|Homo sapiens excision repair
cross-complementing rodent repairt protein.
Length = 419
Score = 31.5 bits (68), Expect = 4.3
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 647 MALDLIKECRKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLIL 790
M L+ + R + I AP EA+AQ A L++ + IT+DSD+ L
Sbjct: 1 MFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWL 48
>AL078605-1|CAI23205.1| 910|Homo sapiens novel protein (KIAA1838)
protein.
Length = 910
Score = 31.5 bits (68), Expect = 4.3
Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 2/161 (1%)
Frame = +2
Query: 320 SEFSGCT--VAIDSYCWLHKGAFACADKLVRGEETDMHIKYCLKYVTMLLSKNIKPILVF 493
S++ GCT + +D+ C L + + + G + + +V + IK I F
Sbjct: 32 SKYPGCTPTIVVDAMCCLRY--WYTPESWICGGQWREYFSALRDFVKTFTAAGIKLIFFF 89
Query: 494 DGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLRRSVDITHAMALDLIKEC 673
DG K KRR N R + K + R+ I +A+
Sbjct: 90 DGMVEQDKRDEWVKRRLKNNREISRIFHYIKSHKEQPGRNMFF----IPSGLAVFTRFAL 145
Query: 674 RKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILLD 796
+ + + + + EAD ++A +++ ++ ED+D ++ D
Sbjct: 146 KTLGQETLCSLQEADYEVASYGLQHNCLGILGEDTDYLIYD 186
>AL008628-1|CAI19554.1| 910|Homo sapiens novel protein (KIAA1838)
protein.
Length = 910
Score = 31.5 bits (68), Expect = 4.3
Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 2/161 (1%)
Frame = +2
Query: 320 SEFSGCT--VAIDSYCWLHKGAFACADKLVRGEETDMHIKYCLKYVTMLLSKNIKPILVF 493
S++ GCT + +D+ C L + + + G + + +V + IK I F
Sbjct: 32 SKYPGCTPTIVVDAMCCLRY--WYTPESWICGGQWREYFSALRDFVKTFTAAGIKLIFFF 89
Query: 494 DGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLRRSVDITHAMALDLIKEC 673
DG K KRR N R + K + R+ I +A+
Sbjct: 90 DGMVEQDKRDEWVKRRLKNNREISRIFHYIKSHKEQPGRNMFF----IPSGLAVFTRFAL 145
Query: 674 RKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILLD 796
+ + + + + EAD ++A +++ ++ ED+D ++ D
Sbjct: 146 KTLGQETLCSLQEADYEVASYGLQHNCLGILGEDTDYLIYD 186
>AB058741-1|BAB47467.1| 917|Homo sapiens KIAA1838 protein protein.
Length = 917
Score = 31.5 bits (68), Expect = 4.3
Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 2/161 (1%)
Frame = +2
Query: 320 SEFSGCT--VAIDSYCWLHKGAFACADKLVRGEETDMHIKYCLKYVTMLLSKNIKPILVF 493
S++ GCT + +D+ C L + + + G + + +V + IK I F
Sbjct: 39 SKYPGCTPTIVVDAMCCLRY--WYTPESWICGGQWREYFSALRDFVKTFTAAGIKLIFFF 96
Query: 494 DGRHLPAKAMTESKRRESRNISKKRAAELLSLGKIEEARSYLRRSVDITHAMALDLIKEC 673
DG K KRR N R + K + R+ I +A+
Sbjct: 97 DGMVEQDKRDEWVKRRLKNNREISRIFHYIKSHKEQPGRNMFF----IPSGLAVFTRFAL 152
Query: 674 RKMNVDCIVAPYEADAQLAYLNIKNIAQLVITEDSDLILLD 796
+ + + + + EAD ++A +++ ++ ED+D ++ D
Sbjct: 153 KTLGQETLCSLQEADYEVASYGLQHNCLGILGEDTDYLIYD 193
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,537,902
Number of Sequences: 237096
Number of extensions: 2302200
Number of successful extensions: 8533
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 8372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8510
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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