Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_N18
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0516 + 23593088-23593116,23593209-23593336,23593527-235937...    30   2.1  
02_04_0103 - 19768288-19768737                                         29   4.9  
02_01_0475 + 3422629-3422695,3422960-3423216                           28   8.5  

>02_04_0516 +
           23593088-23593116,23593209-23593336,23593527-23593714,
           23593861-23593919,23594997-23595345,23596081-23596333,
           23596404-23597476
          Length = 692

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/31 (51%), Positives = 16/31 (51%)
 Frame = -3

Query: 200 KKKXTKXXXXKXKXXKXXXKXXKKKKKKXKK 108
           KKK  K    K K  K   K  KKKKKK KK
Sbjct: 68  KKKKKKKKKKKKKKKKKKKKKNKKKKKKKKK 98



 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/31 (51%), Positives = 16/31 (51%)
 Frame = -3

Query: 200 KKKXTKXXXXKXKXXKXXXKXXKKKKKKXKK 108
           KKK  K    K K  K   K  KKKKKK KK
Sbjct: 69  KKKKKKKKKKKKKKKKKKKKNKKKKKKKKKK 99



 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/31 (51%), Positives = 16/31 (51%)
 Frame = -3

Query: 200 KKKXTKXXXXKXKXXKXXXKXXKKKKKKXKK 108
           KKK  K    K K  K   K  KKKKKK KK
Sbjct: 71  KKKKKKKKKKKKKKKKKKNKKKKKKKKKKKK 101



 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/31 (51%), Positives = 16/31 (51%)
 Frame = -3

Query: 200 KKKXTKXXXXKXKXXKXXXKXXKKKKKKXKK 108
           KKK  K    K K  K   K  KKKKKK KK
Sbjct: 72  KKKKKKKKKKKKKKKKKNKKKKKKKKKKKKK 102



 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/31 (51%), Positives = 16/31 (51%)
 Frame = -3

Query: 200 KKKXTKXXXXKXKXXKXXXKXXKKKKKKXKK 108
           KKK  K    K K  K   K  KKKKKK KK
Sbjct: 73  KKKKKKKKKKKKKKKKNKKKKKKKKKKKKKK 103



 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/31 (51%), Positives = 16/31 (51%)
 Frame = -3

Query: 200 KKKXTKXXXXKXKXXKXXXKXXKKKKKKXKK 108
           KKK  K    K K  K   K  KKKKKK KK
Sbjct: 75  KKKKKKKKKKKKKKNKKKKKKKKKKKKKKKK 105



 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/31 (51%), Positives = 16/31 (51%)
 Frame = -3

Query: 200 KKKXTKXXXXKXKXXKXXXKXXKKKKKKXKK 108
           KKK  K    K K  K   K  KKKKKK KK
Sbjct: 76  KKKKKKKKKKKKKNKKKKKKKKKKKKKKKKK 106



 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = -3

Query: 200 KKKXTKXXXXKXKXXKXXXKXXKKKKKKXKK 108
           KKK  K    K K  K   K  KKKKKK K+
Sbjct: 78  KKKKKKKKKKKNKKKKKKKKKKKKKKKKKKR 108



 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/31 (48%), Positives = 15/31 (48%)
 Frame = -3

Query: 200 KKKXTKXXXXKXKXXKXXXKXXKKKKKKXKK 108
           KKK  K    K K  K      KKKKKK KK
Sbjct: 70  KKKKKKKKKKKKKKKKKKKNKKKKKKKKKKK 100



 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/31 (48%), Positives = 15/31 (48%)
 Frame = -3

Query: 200 KKKXTKXXXXKXKXXKXXXKXXKKKKKKXKK 108
           KKK  K    K K      K  KKKKKK KK
Sbjct: 74  KKKKKKKKKKKKKKKNKKKKKKKKKKKKKKK 104



 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/31 (48%), Positives = 15/31 (48%)
 Frame = -3

Query: 200 KKKXTKXXXXKXKXXKXXXKXXKKKKKKXKK 108
           KKK  K    K    K   K  KKKKKK KK
Sbjct: 77  KKKKKKKKKKKKNKKKKKKKKKKKKKKKKKK 107


>02_04_0103 - 19768288-19768737
          Length = 149

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = -3

Query: 200 KKKXTKXXXXKXKXXKXXXKXXKKKKKKXKK 108
           K+K  K    K K  K   K  KKKKKK KK
Sbjct: 109 KRKRKKKKKKKKKKKKKKKKKKKKKKKKKKK 139


>02_01_0475 + 3422629-3422695,3422960-3423216
          Length = 107

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/31 (48%), Positives = 15/31 (48%)
 Frame = -3

Query: 200 KKKXTKXXXXKXKXXKXXXKXXKKKKKKXKK 108
           KKK  K    K K  K   K  KKKKKK  K
Sbjct: 43  KKKKKKKKKKKKKKKKKKKKKKKKKKKKKNK 73


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,928,280
Number of Sequences: 37544
Number of extensions: 126373
Number of successful extensions: 389
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)