Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP05_F_N12
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1615 - 28157237-28157472,28157649-28157728,28157853-281580...    32   0.73 

>07_03_1615 -
           28157237-28157472,28157649-28157728,28157853-28158009,
           28158379-28158565,28158646-28158772,28159218-28159805,
           28159898-28160443,28161579-28161620,28162081-28162145,
           28162273-28162377,28162682-28162741,28163149-28163237,
           28163611-28163732,28163862-28163968,28164041-28164111,
           28164377-28164470,28165010-28165247,28166112-28166347
          Length = 1049

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
 Frame = +1

Query: 52  VQESQKLAKKVSSNVQETNEKLAPK---IKAAYDDFAKNTQEVIKKIQEAANAKQ*ASI 219
           +QES++  +K++   Q+  E+L  +   I+ A+DD  KN++ ++ + QE   AKQ ASI
Sbjct: 784 LQESRETIQKLAQFGQQQQEELLSRQEQIRHAHDDLMKNSESIL-EAQEEFRAKQ-ASI 840


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,920,900
Number of Sequences: 37544
Number of extensions: 160567
Number of successful extensions: 323
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 322
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)